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2DFB
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Xylanase II from Tricoderma reesei at 100K
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION, SULFATE ION
著者Harata, K, Akiba, T.
登録日2006-02-28
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1TAY
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DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1992-08-06
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
1TBY
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DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1992-08-06
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
1TDY
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DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1992-08-06
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
1TCY
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BU of 1tcy by Molmil
DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1992-08-06
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
1D6Q
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HUMAN LYSOZYME E102 MUTANT LABELLED WITH 2',3'-EPOXYPROPYL GLYCOSIDE OF N-ACETYLLACTOSAMINE
分子名称: GLYCEROL, LYSOZYME, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Muraki, M, Harata, K, Sugita, N, Sato, K.
登録日1999-10-15
公開日2000-01-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Protein-carbohydrate interactions in human lysozyme probed by combining site-directed mutagenesis and affinity labeling.
Biochemistry, 39, 2000
1D6P
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HUMAN LYSOZYME L63 MUTANT LABELLED WITH 2',3'-EPOXYPROPYL N,N'-DIACETYLCHITOBIOSE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, LYSOZYME
著者Muraki, M, Harata, K, Sugita, N, Sato, K.
登録日1999-10-15
公開日2000-01-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Protein-carbohydrate interactions in human lysozyme probed by combining site-directed mutagenesis and affinity labeling.
Biochemistry, 39, 2000
5AWL
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BU of 5awl by Molmil
CRYSTAL STRUCTURE OF A MUTANT OF CHIGNOLIN, CLN025
分子名称: A mutant of Chignolin, CLN025
著者Akiba, T, Ishimura, M, Odahara, T, Harata, K, Honda, S.
登録日2015-07-05
公開日2015-08-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Crystal structure of a ten-amino acid protein
J.Am.Chem.Soc., 130, 2008
2O4A
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Crystal Structure of the N-terminal CUT Domain of SATB1 Bound to Matrix Attachment Region DNA
分子名称: DNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3'), DNA-binding protein SATB1
著者Yamasaki, K, Akiba, T, Harata, K.
登録日2006-12-04
公開日2007-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for recognition of the matrix attachment region of DNA by transcription factor SATB1.
Nucleic Acids Res., 35, 2007
2O49
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Crystal Structure of the N-terminal CUT domain of SATB1 Bound to Matrix Attachment Region DNA
分子名称: DNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3'), DNA-binding protein SATB1
著者Yamasaki, K, Akiba, T, Harata, K.
登録日2006-12-04
公開日2007-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for recognition of the matrix attachment region of DNA by transcription factor SATB1.
Nucleic Acids Res., 35, 2007
1I75
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CRYSTAL STRUCTURE OF CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP.#1011 COMPLEXED WITH 1-DEOXYNOJIRIMYCIN
分子名称: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
著者Kanai, R, Haga, K, Yamane, K, Harata, K.
登録日2001-03-08
公開日2001-04-11
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011 complexed with 1-deoxynojirimycin at 2.0 A resolution.
J.Biochem.(Tokyo), 129, 2001
1K7U
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BU of 1k7u by Molmil
Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,4GlcNAc complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, agglutinin isolectin 3
著者Muraki, M, Ishimura, M, Harata, K.
登録日2001-10-22
公開日2002-04-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interactions of wheat-germ agglutinin with GlcNAc beta 1,6Gal sequence
Biochim.Biophys.Acta, 1569, 2002
1K7V
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Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,6Galbeta1,4Glc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, agglutinin isolectin 3
著者Muraki, M, Ishimura, M, Harata, K.
登録日2001-10-22
公開日2002-04-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interactions of wheat-germ agglutinin with GlcNAc beta 1,6Gal sequence
Biochim.Biophys.Acta, 1569, 2002
1K7T
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Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,6Gal complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-beta-D-galactopyranose, agglutinin isolectin 3
著者Muraki, M, Ishimura, M, Harata, K.
登録日2001-10-22
公開日2002-04-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Interactions of wheat-germ agglutinin with GlcNAc beta 1,6Gal sequence
Biochim.Biophys.Acta, 1569, 2002
1GD9
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CRYSTALL STRUCTURE OF PYROCOCCUS PROTEIN-A1
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Harata, K, Matsui, I, Kuramitsu, S.
登録日2000-09-22
公開日2001-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Temperature dependence of the enzyme-substrate recognition mechanism.
J.Biochem., 129, 2001
1GDE
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BU of 1gde by Molmil
CRYSTAL STRUCTURE OF PYROCOCCUS PROTEIN A-1 E-FORM
分子名称: ASPARTATE AMINOTRANSFERASE, GLUTAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Harata, K, Matsui, I, Kuramitsu, S.
登録日2000-09-23
公開日2001-09-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Temperature dependence of the enzyme-substrate recognition mechanism.
J.Biochem., 129, 2001
1D7F
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CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION
分子名称: CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
著者Ishii, N, Haga, K, Yamane, K, Harata, K.
登録日1999-10-18
公開日2000-03-17
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of asparagine 233-replaced cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011 determined at 1.9 A resolution.
J.Mol.Recog., 13, 2000
1DED
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CRYSTAL STRUCTURE OF ALKALOPHILIC ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE COMPLEXED WITH AN INHIBITOR, ACARBOSE, AT 2.0 A RESOLUTION
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
著者Ishii, N, Haga, K, Yamane, K, Harata, K.
登録日1999-11-14
公開日2000-04-07
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of alkalophilic asparagine 233-replaced cyclodextrin glucanotransferase complexed with an inhibitor, acarbose, at 2.0 A resolution.
J.Biochem.(Tokyo), 127, 2000
2TSB
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AZURIN MUTANT M121A-AZIDE
分子名称: AZIDE ION, AZURIN AZIDE, COPPER (II) ION
著者Tsai, L.-C, Bonander, N, Harata, K, Karlsson, B.G, Vanngard, T, Langer, V, Sjolin, L.
登録日1996-05-10
公開日1996-11-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mutant Met121Ala of Pseudomonas aeruginosa azurin and its azide derivative: crystal structures and spectral properties.
Acta Crystallogr.,Sect.D, 52, 1996
2TSA
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AZURIN MUTANT M121A
分子名称: AZURIN, COPPER (II) ION
著者Tsai, L.-C, Bonander, N, Harata, K, Karlsson, B.G, Vanngard, T, Langer, V, Sjolin, L.
登録日1996-05-10
公開日1996-11-08
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutant Met121Ala of Pseudomonas aeruginosa azurin and its azide derivative: crystal structures and spectral properties.
Acta Crystallogr.,Sect.D, 52, 1996
1WP6
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Crystal structure of maltohexaose-producing amylase from alkalophilic Bacillus sp.707.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Glucan 1,4-alpha-maltohexaosidase, ...
著者Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K.
登録日2004-08-31
公開日2004-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical and crystallographic analyses of maltohexaose-producing amylase from alkalophilic Bacillus sp. 707
Biochemistry, 43, 2004
1WPC
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Crystal structure of maltohexaose-producing amylase complexed with pseudo-maltononaose
分子名称: 4,6-dideoxy-alpha-D-xylo-hexopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-alpha-D-xylo-hexopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-galactopyranose, 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, ...
著者Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K.
登録日2004-09-01
公開日2004-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical and crystallographic analyses of maltohexaose-producing amylase from alkalophilic Bacillus sp. 707
Biochemistry, 43, 2004
2D3L
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Crystal structure of maltohexaose-producing amylase from Bacillus sp.707 complexed with maltopentaose.
分子名称: CALCIUM ION, Glucan 1,4-alpha-maltohexaosidase, SODIUM ION, ...
著者Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K.
登録日2005-09-29
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Role of Trp140 at subsite -6 on the maltohexaose production of maltohexaose-producing amylase from alkalophilic Bacillus sp.707
Protein Sci., 15, 2006
2D3N
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Crystal structure of maltohexaose-producing amylase from Bacillus sp.707 complexed with maltohexaose
分子名称: CALCIUM ION, Glucan 1,4-alpha-maltohexaosidase, SODIUM ION, ...
著者Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K.
登録日2005-09-29
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Role of Trp140 at subsite -6 on the maltohexaose production of maltohexaose-producing amylase from alkalophilic Bacillus sp.707
Protein Sci., 15, 2006
1V3M
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Crystal structure of F283Y mutant cyclodextrin glycosyltransferase complexed with a pseudo-tetraose derived from acarbose
分子名称: 4,6-dideoxy-alpha-D-xylo-hexopyranose-(1-4)-beta-D-galactopyranose, 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, CALCIUM ION, ...
著者Kanai, R, Haga, K, Akiba, T, Yamane, K, Harata, K.
登録日2003-11-03
公開日2004-08-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of Phe283 in enzymatic reaction of cyclodextrin glycosyltransferase from alkalophilic Bacillus sp.1011: Substrate binding and arrangement of the catalytic site
PROTEIN SCI., 13, 2004

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