Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3UM9
DownloadVisualize
BU of 3um9 by Molmil
Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Bpro0530
Descriptor: Haloacid dehalogenase, type II, NICKEL (II) ION, ...
Authors:Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-11-12
Release date:2012-11-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
3UMG
DownloadVisualize
BU of 3umg by Molmil
Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Rha0230
Descriptor: CHLORIDE ION, Haloacid dehalogenase
Authors:Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-11-13
Release date:2012-11-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
3UMC
DownloadVisualize
BU of 3umc by Molmil
Crystal Structure of the L-2-Haloacid Dehalogenase PA0810
Descriptor: CHLORIDE ION, SODIUM ION, haloacid dehalogenase
Authors:Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-11-13
Release date:2012-11-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
3UMB
DownloadVisualize
BU of 3umb by Molmil
Crystal Structure of the L-2-Haloacid Dehalogenase RSc1362
Descriptor: CHLORIDE ION, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-11-12
Release date:2012-11-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
7YLV
DownloadVisualize
BU of 7ylv by Molmil
yeast TRiC-plp2-substrate complex at S2 ATP binding state
Descriptor: Phosducin-like protein 2, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
Authors:Han, W.Y.
Deposit date:2022-07-27
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT.
Sci Adv, 9, 2023
7YLX
DownloadVisualize
BU of 7ylx by Molmil
yeast TRiC-plp2-actin complex at S4 closed TRiC state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Han, W.Y.
Deposit date:2022-07-27
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT.
Sci Adv, 9, 2023
7YLY
DownloadVisualize
BU of 7yly by Molmil
yeast TRiC-plp2 complex at S5 closed TRiC state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Han, W.Y.
Deposit date:2022-07-27
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT.
Sci Adv, 9, 2023
7YLU
DownloadVisualize
BU of 7ylu by Molmil
yeast TRiC-plp2-substrate complex at S1 TRiC-NPP state
Descriptor: Phosducin-like protein 2, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
Authors:Han, W.Y.
Deposit date:2022-07-27
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT.
Sci Adv, 9, 2023
7YLW
DownloadVisualize
BU of 7ylw by Molmil
yeast TRiC-plp2-tubulin complex at S3 closed TRiC state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Han, W.Y.
Deposit date:2022-07-27
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT.
Sci Adv, 9, 2023
7WVP
DownloadVisualize
BU of 7wvp by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C2 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-02-10
Release date:2022-04-06
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron.
Nature, 604, 2022
7WVQ
DownloadVisualize
BU of 7wvq by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C3 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-02-10
Release date:2022-04-06
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron.
Nature, 604, 2022
7WK4
DownloadVisualize
BU of 7wk4 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron spike protein with ACE2, C1 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-01-08
Release date:2022-02-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron
Nature, 604, 2022
7WK5
DownloadVisualize
BU of 7wk5 by Molmil
Cryo-EM structure of Omicron S-ACE2, C2 state
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-01-08
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Molecular basis of SARS-CoV-2 Omicron variant receptor engagement and antibody evasion and neutralization
Biorxiv, 2022
7WK6
DownloadVisualize
BU of 7wk6 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron spike protein with human ACE2 (focus refinement on RBD-1/ACE2)
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Han, W.Y, Wang, Y.F.
Deposit date:2022-01-08
Release date:2022-02-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Molecular basis of receptor binding and antibody neutralization of Omicron
Nature, 604, 2022
3R3Y
DownloadVisualize
BU of 3r3y by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/Fluoroacetate
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R40
DownloadVisualize
BU of 3r40 by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/apo
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3X
DownloadVisualize
BU of 3r3x by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Bromoacetate
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3U
DownloadVisualize
BU of 3r3u by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/apo
Descriptor: CHLORIDE ION, Fluoroacetate dehalogenase, NICKEL (II) ION
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3Z
DownloadVisualize
BU of 3r3z by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/Glycolate
Descriptor: Fluoroacetate dehalogenase, GLYCOLIC ACID, NICKEL (II) ION
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R41
DownloadVisualize
BU of 3r41 by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/apo
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-17
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3W
DownloadVisualize
BU of 3r3w by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Chloroacetate
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3V
DownloadVisualize
BU of 3r3v by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Fluoroacetate
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
7WK3
DownloadVisualize
BU of 7wk3 by Molmil
SARS-CoV-2 Omicron S-open
Descriptor: Spike glycoprotein
Authors:Li, J.W, Cong, Y.
Deposit date:2022-01-08
Release date:2022-01-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for ACE2 engagement and antibody evasion and neutralization of SARS-Co-2 Omicron varient
To Be Published
7F3H
DownloadVisualize
BU of 7f3h by Molmil
Crystal structure of cytochrome P450DA heme domain
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE, SERINE, ...
Authors:Wan, N.W.
Deposit date:2021-06-16
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Directed evolution of cytochrome P450DA hydroxylase activity for stereoselective biohydroxylation
Catalysis Science And Technology, 12, 2022
7KCO
DownloadVisualize
BU of 7kco by Molmil
ROR gamma in complex with SCR2 and compound 3
Descriptor: 1-[(2-chlorophenyl)methyl]-N-{[4-(methylsulfonyl)phenyl]methyl}-4',5'-dihydrospiro[piperidine-4,7'-thieno[2,3-c]pyran]-2'-carboxamide, GLYCEROL, Nuclear receptor ROR-gamma, ...
Authors:Durbin, J.D, Guo, S.Y, Stout, S.L, Clawson, D.K.
Deposit date:2020-10-06
Release date:2021-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Defining Target Engagement Required for Efficacy In Vivo at the Retinoic Acid Receptor-Related Orphan Receptor C2 (ROR gamma t).
J.Med.Chem., 64, 2021

 

12>

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon