5JF1
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with actinonin | Descriptor: | ACETATE ION, ACTINONIN, Peptide deformylase, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5O9S
| HsNMT1 in complex with CoA and Myristoylated-GKSNSKLK octapeptide | Descriptor: | CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ... | Authors: | Dian, C, Meinnel, T, Giglione, C. | Deposit date: | 2017-06-20 | Release date: | 2018-06-27 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern. Nat. Chem. Biol., 14, 2018
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5O9V
| HsNMT1 in complex with CoA and Myristoylated-GGCFSKPK octapeptide | Descriptor: | Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ... | Authors: | Dian, C, Meinnel, T, Giglione, C. | Deposit date: | 2017-06-20 | Release date: | 2018-06-27 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.201 Å) | Cite: | Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern. Nat. Chem. Biol., 14, 2018
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5O9T
| HsNMT1 in complex with CoA and acetylated-NCFSKPK peptide | Descriptor: | 1IP-CYS-PHE-SER-LYS-PRO-ARG, CHLORIDE ION, GLYCEROL, ... | Authors: | Dian, C, Meinnel, T, Giglione, C. | Deposit date: | 2017-06-20 | Release date: | 2018-06-27 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern. Nat. Chem. Biol., 14, 2018
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5O9U
| HsNMT1 in complex with CoA and Myristoylated-GCSVSKKK octapeptide | Descriptor: | COENZYME A, Calcineurin B-like protein 4, GLYCEROL, ... | Authors: | Dian, C, Meinnel, T, Giglione, C. | Deposit date: | 2017-06-20 | Release date: | 2018-06-27 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern. Nat. Chem. Biol., 14, 2018
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3PN4
| Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) in complex with actinonin (crystallized in PEG-550-MME) | Descriptor: | ACTINONIN, Peptide deformylase 1B, chloroplastic, ... | Authors: | Fieulaine, S, Meinnel, T, Giglione, C. | Deposit date: | 2010-11-18 | Release date: | 2011-06-08 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Trapping conformational States along ligand-binding dynamics of Peptide deformylase: the impact of induced fit on enzyme catalysis. Plos Biol., 9, 2011
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3PN2
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3PN6
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3PN5
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3PN3
| Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) in complex with inhibitor 21 | Descriptor: | Peptide deformylase 1B, chloroplastic, ZINC ION, ... | Authors: | Fieulaine, S, Meinnel, T, Giglione, C. | Deposit date: | 2010-11-18 | Release date: | 2011-06-08 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Trapping conformational States along ligand-binding dynamics of Peptide deformylase: the impact of induced fit on enzyme catalysis. Plos Biol., 9, 2011
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3M6Q
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3M6O
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3M6R
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3M6P
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5MTD
| Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form II | Descriptor: | NICKEL (II) ION, Putative uncharacterized protein orf60T, TRIETHYLENE GLYCOL, ... | Authors: | Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T. | Deposit date: | 2017-01-09 | Release date: | 2017-09-20 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation. Sci Rep, 7, 2017
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5MTC
| Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form I | Descriptor: | NICKEL (II) ION, Putative uncharacterized protein orf60T, ZINC ION | Authors: | Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T. | Deposit date: | 2017-01-09 | Release date: | 2017-09-20 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation. Sci Rep, 7, 2017
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3O3J
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5JEX
| Crystal structure of type 2 PDF from Streptococcus agalactiae, crystallized in imidazole buffer | Descriptor: | IMIDAZOLE, Peptide deformylase, ZINC ION | Authors: | Fieulaine, S, Giglione, C, Meinnel, T. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5JF3
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor AT018 | Descriptor: | ACETATE ION, IMIDAZOLE, Peptide deformylase, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5JEY
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5JF6
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor 6b (AB47) | Descriptor: | 2-(5-bromo-1H-indol-3-yl)-N-hydroxyacetamide, ACETATE ION, Peptide deformylase, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T, Hamiche, K. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5JF8
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor RAS358 (21) | Descriptor: | ACETATE ION, IMIDAZOLE, Peptide deformylase, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5JEZ
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with tripeptide Met-Ala-Ser | Descriptor: | ACETATE ION, Met-Ala-Ser, Peptide deformylase, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5JF7
| Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor SMP289 | Descriptor: | 2-(3-benzyl-5-bromo-1H-indol-1-yl)-N-hydroxyacetamide, ACETATE ION, IMIDAZOLE, ... | Authors: | Fieulaine, S, Giglione, C, Meinnel, T, Hamiche, K. | Deposit date: | 2016-04-19 | Release date: | 2016-11-30 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | A unique peptide deformylase platform to rationally design and challenge novel active compounds. Sci Rep, 6, 2016
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5MTE
| Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T in complex with actinonin - crystal form II | Descriptor: | ACTINONIN, NICKEL (II) ION, Putative uncharacterized protein orf60T, ... | Authors: | Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T. | Deposit date: | 2017-01-09 | Release date: | 2017-11-29 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts. Biochim. Biophys. Acta, 1866, 2018
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