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1AZP
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BU of 1azp by Molmil
HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
分子名称: DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
著者Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
登録日1997-11-19
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998
1BHR
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BU of 1bhr by Molmil
2'-DEOXY-ISOGUANOSINE BASE PAIRED TO THYMIDINE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: DNA (5'-D(*CP*GP*CP*IGUP*AP*AP*TP*TP*TP*GP*CP*G)-3')
著者Robinson, H, Gao, Y.-G, Bauer, C, Roberts, C, Switzer, C, Wang, A.H.-J.
登録日1998-06-10
公開日1998-11-04
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献2'-Deoxyisoguanosine adopts more than one tautomer to form base pairs with thymidine observed by high-resolution crystal structure analysis.
Biochemistry, 37, 1998
1CC3
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BU of 1cc3 by Molmil
PURPLE CUA CENTER
分子名称: COPPER (II) ION, PROTEIN (CUA AZURIN)
著者Robinson, H, Ang, M.C, Gao, Y.-G, Hay, M.T, Lu, Y, Wang, A.H.-J.
登録日1999-03-03
公開日1999-12-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of electron transfer modulation in the purple CuA center.
Biochemistry, 38, 1999
1C8C
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BU of 1c8c by Molmil
CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS
分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', DNA-BINDING PROTEIN 7A
著者Su, S, Gao, Y.-G, Robinson, H, Liaw, Y.-C, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
登録日2000-05-04
公開日2001-05-04
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs.
J.Mol.Biol., 303, 2000
1D33
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BU of 1d33 by Molmil
Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies
分子名称: 5'-D(*CP*GP*CP*(G49)P*CP*G)-3', DAUNOMYCIN, MAGNESIUM ION
著者Wang, A.H.-J, Gao, Y.-G, Liaw, Y.-C, Li, Y.-K.
登録日1991-02-27
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies.
Biochemistry, 30, 1991
1DNO
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BU of 1dno by Molmil
A-DNA/RNA DODECAMER R(GCG)D(TATACGC) MG BINDING SITES
分子名称: DNA/RNA (5'-R(*GP*CP*GP)-D(*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
著者Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
登録日1999-12-16
公開日2000-04-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
3ERY
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BU of 3ery by Molmil
Different thermodynamic binding mechanisms and peptide fine specificities associated with a panel of structurally similar high-affinity T cell receptors
分子名称: 2-oxoglutarate dehydrogenase E1 peptide, H-2 class I histocompatibility antigen
著者Huang, R.H, Jones, L.L.
登録日2008-10-03
公開日2008-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Different thermodynamic binding mechanisms and peptide fine specificities associated with a panel of structurally similar high-affinity T cell receptors
Biochemistry, 47, 2008
5B5X
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BU of 5b5x by Molmil
Crystal structure of limiting CO2-inducible protein LCIC
分子名称: SULFATE ION, ZINC ION, limiting CO2-inducible protein LCIC
著者Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Cajar, O.M, Gao, Y.
登録日2016-05-24
公開日2016-12-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.511 Å)
主引用文献Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B60
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BU of 5b60 by Molmil
Crystal structure of PtLCIB4 S47R mutant, a homolog of the limiting CO2-inducible protein LCIB
分子名称: CHLORIDE ION, PtLCIB4 S47R mutant, ZINC ION
著者Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
登録日2016-05-24
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B5Y
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BU of 5b5y by Molmil
Crystal structure of PtLCIB4, a homolog of the limiting CO2-inducible protein LCIB
分子名称: ACETATE ION, PtLCIB4, ZINC ION
著者Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Cajar, O.M, Gao, Y.
登録日2016-05-24
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5B5Z
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BU of 5b5z by Molmil
Crystal structure of PtLCIB4 H88A mutant, a homolog of the limiting CO2-inducible protein LCIB
分子名称: PtLCIB4 H88A mutant, ZINC ION
著者Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
登録日2016-05-24
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5D6M
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BU of 5d6m by Molmil
Mn(II)-loaded MnCcP.1
分子名称: Cytochrome c peroxidase, mitochondrial, MANGANESE (II) ION, ...
著者Robinson, H, Gao, Y.-G, Hosseinzadeh, P, Lu, Y.
登録日2015-08-12
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions.
Biochemistry, 55, 2016
5FC9
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BU of 5fc9 by Molmil
Novel Purple Cupredoxin from Nitrosopumilus maritimus
分子名称: Blue (Type 1) copper domain protein, COPPER (II) ION
著者Hosseinzadeh, P, Lu, Y, Robinson, H, Gao, Y.-G.
登録日2015-12-15
公開日2016-05-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Purple Cupredoxin from Nitrosopumilus maritimus Containing a Mononuclear Type 1 Copper Center with an Open Binding Site.
J.Am.Chem.Soc., 138, 2016
4FWZ
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BU of 4fwz by Molmil
Aquoferric CuB myoglobin (L29H F43H sperm whale myoglobin)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Gao, Y.-G, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
登録日2012-07-02
公開日2012-07-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
4FWX
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BU of 4fwx by Molmil
Aquoferric F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Gao, Y.-G, Stoner-Ma, D, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
登録日2012-07-02
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
4FWY
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BU of 4fwy by Molmil
F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin) with copper bound
分子名称: COPPER (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Gao, Y.-G, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
登録日2012-07-02
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
5VEH
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BU of 5veh by Molmil
Re-refinement OF THE PDB STRUCTURE 1yiz of Aedes aegypti kynurenine aminotransferase
分子名称: BROMIDE ION, GLYCEROL, Kynurenine aminotransferase
著者Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-04
公開日2017-11-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
2IA8
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BU of 2ia8 by Molmil
Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase
分子名称: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE
著者Pfister, T, Mirarefi, A.Y, Gengenbach, A.J, Zhao, X, Conaster, C.D.N, Gao, Y.G, Robinson, H, Zukoski, C.F, Wang, A.H.J, Lu, Y.
登録日2006-09-07
公開日2007-08-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase
J.Biol.Inorg.Chem., 12, 2007
2ICV
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BU of 2icv by Molmil
Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase
分子名称: COBALT (II) ION, Cytochrome c peroxidase, mitochondrial, ...
著者Pfister, T, Mirarefi, A.Y, Gengenbach, A.J, Zhao, X, Conaster, C.D.N, Gao, Y.G, Robinson, H, Zukoski, C.F, Wang, A.H.J, Lu, Y.
登録日2006-09-13
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase
J.Biol.Inorg.Chem., 12, 2007
6M4C
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BU of 6m4c by Molmil
C. albicans actin interacting protein Aip5
分子名称: C. albicans actin interacting protein Aip5
著者Loh, Z.Y, Gao, Y.G, Xie, Y, Miao, Y.
登録日2020-03-06
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Orchestrated actin nucleation by the Candida albicans polarisome complex enables filamentous growth.
J.Biol.Chem., 295, 2020
7EQ4
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BU of 7eq4 by Molmil
Crystal Structure of the N-terminus of Nonstructural protein 1 from SARS-CoV-2
分子名称: Host translation inhibitor nsp1
著者Liu, Y, Ke, Z, Hu, H, Zhao, K, Xiao, J, Xia, Y, Li, Y.
登録日2021-04-29
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural Basis and Function of the N Terminus of SARS-CoV-2 Nonstructural Protein 1.
Microbiol Spectr, 9, 2021
7FBT
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BU of 7fbt by Molmil
Crystal structure of chitinase (RmChi1) from Rhizomucor miehei (sp p32 2 1, MR)
分子名称: Chitinase, MAGNESIUM ION
著者Jiang, Z.Q, Hu, S.Q, Zhu, Q, Liu, Y.C, Ma, J.W, Yan, Q.J, Gao, Y.G, Yang, S.Q.
登録日2021-07-12
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a chitinase (RmChiA) from the thermophilic fungus Rhizomucor miehei with a real active site tunnel.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
4F86
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BU of 4f86 by Molmil
Structure analysis of Geranyl diphosphate methyltransferase in complex with GPP and sinefungin
分子名称: GERANYL DIPHOSPHATE, Geranyl diphosphate 2-C-methyltransferase, MAGNESIUM ION, ...
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
4F85
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Structure analysis of Geranyl diphosphate methyltransferase
分子名称: Geranyl diphosphate 2-C-methyltransferase
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
4F84
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Structure analysis of Geranyl diphosphate methyltransferase in complex with SAM
分子名称: Geranyl diphosphate 2-C-methyltransferase, S-ADENOSYLMETHIONINE
著者Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
登録日2012-05-17
公開日2012-10-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012

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