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2I9T
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BU of 2i9t by Molmil
Structure of NF-kB p65-p50 heterodimer bound to PRDII element of B-interferon promoter
分子名称: 5'-D(*AP*GP*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*TP*CP*TP*G)-3', 5'-D(*CP*AP*GP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*CP*AP*CP*T)-3', Nuclear factor NF-kappa-B p105 subunit, ...
著者Escalante, C.R, Shen, L, Thanos, D, Aggarwal, A.K.
登録日2006-09-06
公開日2007-02-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of NF-kappaB p50/p65 heterodimer bound to the PRDII DNA element from the interferon-beta promoter
Structure, 10, 2002
1IF1
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BU of 1if1 by Molmil
INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
分子名称: DNA (26-MER), PROTEIN (INTERFERON REGULATORY FACTOR 1)
著者Escalante, C.R, Yie, J, Thanos, D, Aggarwal, A.
登録日1997-09-12
公開日1998-02-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of IRF-1 with bound DNA reveals determinants of interferon regulation.
Nature, 391, 1998
2PI0
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BU of 2pi0 by Molmil
Crystal Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-B enhancer
分子名称: Interferon regulatory factor 3, PRDIII-I region of human interferon-B promoter strand 1, PRDIII-I region of human interferon-B promoter strand 2
著者Escalante, C.R, Nistal-Villan, E, Leyi, S, Garcia-Sastre, A, Aggarwal, A.K.
登録日2007-04-12
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structure of IRF-3 bound to the PRDIII-I regulatory element of the human interferon-beta enhancer.
Mol.Cell, 26, 2007
6XB8
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BU of 6xb8 by Molmil
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
分子名称: DNA (5'-D(*GP*CP*TP*CP*TP*T)-3'), Protein Rep68, ZINC ION
著者Escalante, C.R, Musayev, F.N.
登録日2020-06-05
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSH
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BU of 7jsh by Molmil
Adeno-Associated Virus 2 Rep68 HD Heptamer-ssAAVS1 with ATPgS
分子名称: DNA (5'-D(P*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*C)-3'), Protein Rep68
著者Escalante, C.R.
登録日2020-08-14
公開日2020-12-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSG
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BU of 7jsg by Molmil
Adeno-Associated Virus 2 Rep68 HD-Heptamer-ssDNA with ATPgS
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Protein Rep68
著者Escalante, C.R.
登録日2020-08-14
公開日2020-12-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSF
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BU of 7jsf by Molmil
Adeno-Associated Virus Helicase domain Heptamer with ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*T)-3'), Protein Rep68
著者Escalante, C.R.
登録日2020-08-14
公開日2020-12-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSI
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BU of 7jsi by Molmil
Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*T)-3'), Protein Rep68
著者Escalante, C.R.
登録日2020-08-14
公開日2020-12-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.01 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
7JSE
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BU of 7jse by Molmil
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
分子名称: DNA (5'-D(*TP*TP*TP*T)-3'), Protein Rep68
著者Escalante, C.R.
登録日2020-08-14
公開日2020-12-09
最終更新日2021-10-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.
Nucleic Acids Res., 48, 2020
5V30
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BU of 5v30 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
分子名称: GLYCEROL, SULFATE ION, Transcriptional regulator
著者Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
登録日2017-03-06
公開日2018-06-13
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
4ZO0
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BU of 4zo0 by Molmil
X-ray Structure of AAV-2 Origin Binding Domain
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, Protein Rep68
著者Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
登録日2015-05-05
公開日2015-10-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies of AAV2 Rep68 Reveal a Partially Structured Linker and Compact Domain Conformation.
Biochemistry, 54, 2015
4ZQ9
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BU of 4zq9 by Molmil
X-ray structure of AAV-2 OBD bound to AAVS1 site 3:1
分子名称: DNA (5'-D(*CP*GP*CP*CP*CP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*GP*GP*GP*C)-3'), MANGANESE (II) ION, ...
著者Musayev, F.N, Zarate-Perez, F, Escalante, C.R.
登録日2015-05-08
公開日2015-09-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
5EYB
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BU of 5eyb by Molmil
X-ray Structure of Reb1-Ter Complex
分子名称: DNA (26-MER), DNA-binding protein reb1
著者Jaiswal, R, Choudhury, M, Zaman, S, Singh, S, Santosh, V, Bastia, D, Escalante, C.R.
登録日2015-11-24
公開日2016-04-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe.
Proc.Natl.Acad.Sci.USA, 113, 2016
6NP6
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BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
分子名称: Crp/Fnr family transcriptional regulator, GLYCEROL
著者Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
登録日2019-01-17
公開日2019-06-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
1U0J
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BU of 1u0j by Molmil
Crystal Structure of AAV2 Rep40-ADP complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein
著者James, J.A, Aggarwal, A.K, Linden, R.M, Escalante, C.R.
登録日2004-07-13
公開日2004-08-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of adeno-associated virus type 2 Rep40-ADP complex: Insight into nucleotide recognition and catalysis by superfamily 3 helicases
Proc.Natl.Acad.Sci.USA, 101, 2004
5BYG
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BU of 5byg by Molmil
X-ray structure of AAV2 OBD-AAVS1 complex 2:1
分子名称: CITRIC ACID, DNA (5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*T)-3'), DNA (5'-D(*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*CP*CP*GP*A)-3'), ...
著者Musayev, F.N, Escalante, C.R.
登録日2015-06-10
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
J.Biol.Chem., 290, 2015
3QU3
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BU of 3qu3 by Molmil
Crystal structure of IRF-7 DBD apo form
分子名称: 1,2-ETHANEDIOL, Interferon regulatory factor 7, SODIUM ION
著者De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
登録日2011-02-23
公開日2011-06-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011
3QU6
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BU of 3qu6 by Molmil
Crystal structure of IRF-3 DBD free form
分子名称: CHLORIDE ION, IRF3 protein, SODIUM ION, ...
著者De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
登録日2011-02-23
公開日2011-06-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011
1MX3
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BU of 1mx3 by Molmil
Crystal structure of CtBP dehydrogenase core holo form
分子名称: ACETIC ACID, C-terminal binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kumar, V, Carlson, J.E, Ohgi, K.E, Edwards, T.E, Rose, D.W, Escalante, C.R, Aggarwal, A.K.
登録日2002-10-01
公開日2002-12-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Transcription Corepressor CtBP Is an NAD+-Regulated Dehydrogenase
Mol.Cell, 10, 2002
1S97
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BU of 1s97 by Molmil
DPO4 with GT mismatch
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*G)-3', 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Trincao, J, Johnson, R.E, Wolfle, W.T, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
登録日2004-02-03
公開日2004-04-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dpo4 is hindered in extending a G.T mismatch by a reverse wobble
Nat.Struct.Mol.Biol., 11, 2004
1SDO
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BU of 1sdo by Molmil
Crystal Structure of Restriction Endonuclease BstYI
分子名称: BstYI
著者Townson, S.A, Samuelson, J.C, Vanamee, E.S, Edwards, T.A, Escalante, C.R, Xu, S.Y, Aggarwal, A.K.
登録日2004-02-13
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of BstYI at 1.85 A Resolution: A Thermophilic Restriction Endonuclease with Overlapping Specificities to BamHI and BglII
J.Mol.Biol., 338, 2004
1S9F
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BU of 1s9f by Molmil
DPO with AT matched
分子名称: 2',3'-DIDEOXYCYTOSINE-5'-DIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
著者Trincao, J, Johnson, R.E, Wolfle, W.T, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
登録日2004-02-04
公開日2005-02-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dpo4 is hindered in extending a G.T mismatch by a reverse wobble
Nat.Struct.Mol.Biol., 11, 2004
1S9H
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BU of 1s9h by Molmil
Crystal Structure of Adeno-associated virus Type 2 Rep40
分子名称: Rep 40 protein
著者James, J.A, Escalante, C.R, Yoon-Robarts, M, Edwards, T.A, Linden, R.M, Aggarwal, A.K.
登録日2004-02-04
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the SF3 Helicase from Adeno-Associated Virus Type 2
Structure, 11, 2003
1JIH
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BU of 1jih by Molmil
Yeast DNA Polymerase ETA
分子名称: DNA Polymerase ETA
著者Trincao, J, Johnson, R.E, Escalante, C.R, Prakash, S, Prakash, L, Aggarwal, A.K.
登録日2001-07-02
公開日2002-01-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis
Mol.Cell, 8, 2001
5BVI
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BU of 5bvi by Molmil
X-ray Structure of Interferon Regulatory Factor 4 IAD Domain
分子名称: CHLORIDE ION, Interferon regulatory factor 4
著者Escalate, C.R, Remesh, S.G.
登録日2015-06-05
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Studies of IRF4 Reveal a Flexible Autoinhibitory Region and a Compact Linker Domain.
J.Biol.Chem., 290, 2015

 

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