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8DEU
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BU of 8deu by Molmil
Cryo-electron microscopy structure of Neisseria gonorrhoeae multidrug efflux pump MtrD with CASP peptide complex
Descriptor: CASP peptide, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Lyu, M, Yu, E.W.
Deposit date:2022-06-21
Release date:2022-09-14
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural Basis of Peptide-Based Antimicrobial Inhibition of a Resistance-Nodulation-Cell Division Multidrug Efflux Pump.
Microbiol Spectr, 10, 2022
7JZ2
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BU of 7jz2 by Molmil
Succinate: quinone oxidoreductase SQR from E.coli K12
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Lyu, M, Su, C.-C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W.
Deposit date:2020-09-01
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
7JZ3
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BU of 7jz3 by Molmil
Osmoporin OmpC from E.coli K12
Descriptor: Outer membrane protein C
Authors:Lyu, M, Su, C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W.
Deposit date:2020-09-01
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
7KGE
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BU of 7kge by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-II
Descriptor: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGF
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BU of 7kgf by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-III
Descriptor: Efflux pump membrane transporter
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGH
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BU of 7kgh by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-II
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGD
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BU of 7kgd by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-I
Descriptor: Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGG
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BU of 7kgg by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-I
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KGI
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BU of 7kgi by Molmil
Cryo-EM Structures of AdeB from Acinetobacter baumannii: AdeB-ET-III
Descriptor: ETHIDIUM, Efflux pump membrane transporter, PHOSPHATIDYLETHANOLAMINE
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryoelectron Microscopy Structures of AdeB Illuminate Mechanisms of Simultaneous Binding and Exporting of Substrates.
Mbio, 12, 2021
7KG4
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BU of 7kg4 by Molmil
Recombinant Beta-2-Glycoprotein I antibody recognition loop mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Klenotic, P.A, Yu, E.W.
Deposit date:2020-10-15
Release date:2021-10-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Beta-2-Glycoprotein I and its role in APS
To be published
7M4U
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BU of 7m4u by Molmil
A. baumannii Ribosome-Eravacycline complex: 30S
Descriptor: 16s Ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4Z
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BU of 7m4z by Molmil
A. baumannii Ribosome-Eravacycline complex: hpf-bound 70S
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4Y
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BU of 7m4y by Molmil
A. baumannii Ribosome-Eravacycline complex: E-site tRNA 70S
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4X
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BU of 7m4x by Molmil
A. baumannii Ribosome-Eravacycline complex: P-site tRNA 70S
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4V
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BU of 7m4v by Molmil
A. baumannii Ribosome-Eravacycline complex: 50S
Descriptor: 23s ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
7M4W
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BU of 7m4w by Molmil
A. baumannii Ribosome-Eravacycline complex: Empty 70S
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2021-03-22
Release date:2021-05-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii.
Mbio, 12, 2021
1BKS
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BU of 1bks by Molmil
TRYPTOPHAN SYNTHASE (E.C.4.2.1.20) FROM SALMONELLA TYPHIMURIUM
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE
Authors:Hyde, C.C.
Deposit date:1998-07-10
Release date:1999-03-23
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Exchange of K+ or Cs+ for Na+ induces local and long-range changes in the three-dimensional structure of the tryptophan synthase alpha2beta2 complex.
Biochemistry, 35, 1996
1FLR
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BU of 1flr by Molmil
4-4-20 FAB FRAGMENT
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, 4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT
Authors:Whitlow, M.
Deposit date:1995-01-19
Release date:1995-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 A structure of anti-fluorescein 4-4-20 Fab.
Protein Eng., 8, 1995
1NBV
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BU of 1nbv by Molmil
AN AUTOANTIBODY TO SINGLE-STRANDED DNA: COMPARISON OF THE THREE-DIMENSIONAL STRUCTURES OF THE UNLIGANDED FAB AND A DEOXYNUCLEOTIDE-FAB COMPLEX
Descriptor: IGG2B-KAPPA BV04-01 FAB (HEAVY CHAIN), IGG2B-KAPPA BV04-01 FAB (LIGHT CHAIN)
Authors:Herron, J.N, He, X.M, Edmundson, A.B.
Deposit date:1993-03-16
Release date:1994-01-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:An autoantibody to single-stranded DNA: comparison of the three-dimensional structures of the unliganded Fab and a deoxynucleotide-Fab complex.
Proteins, 11, 1991
5XAJ
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BU of 5xaj by Molmil
Structural mimicry of the dengue virus envelope glycoprotein revealed by the crystallographic study of an idiotype-anti-idiotype Fab complex.
Descriptor: Fab E1 heavy chain, Fab E1 light chain, FabHM14c10 heavy chain, ...
Authors:Wong, Y.H, Goh, B.C, Lescar, J.
Deposit date:2017-03-13
Release date:2017-06-14
Last modified:2017-07-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural mimicry of the dengue virus envelope glycoprotein revealed by the crystallographic study of an idiotype-anti-idiotype Fab complex
J. Virol., 2017
7BNV
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BU of 7bnv by Molmil
Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-300
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain, Light Chain, ...
Authors:Hall, G, Cowan, R, Carr, M.
Deposit date:2021-01-22
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cross-Reactive SARS-CoV-2 Neutralizing Antibodies From Deep Mining of Early Patient Responses.
Front Immunol, 12, 2021
7CSQ
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BU of 7csq by Molmil
Solution structure of the complex between p75NTR-DD and TRADD-DD
Descriptor: Tumor necrosis factor receptor superfamily member 16, Tumor necrosis factor receptor type 1-associated DEATH domain protein
Authors:Lin, Z, Zhang, N.
Deposit date:2020-08-16
Release date:2021-08-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structural basis of NF-kappa B signaling by the p75 neurotrophin receptor interaction with adaptor protein TRADD through their respective death domains.
J.Biol.Chem., 297, 2021
6B1G
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BU of 6b1g by Molmil
Solution structure of TDP-43 N-terminal domain dimer.
Descriptor: TAR DNA-binding protein 43, S48E Mutant, Y4R Mutant
Authors:Naik, M.T, Wang, A, Conicella, A, Fawzi, N.L.
Deposit date:2017-09-18
Release date:2018-02-28
Last modified:2020-01-01
Method:SOLUTION NMR
Cite:A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing.
EMBO J., 37, 2018
6XQP
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BU of 6xqp by Molmil
Structure of human D462-E4 TCR in complex with human MR1-5-OP-RU
Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, BROMIDE ION, Beta-2-microglobulin, ...
Authors:Awad, W, Rossjohn, J.
Deposit date:2020-07-10
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Atypical TRAV1-2 - T cell receptor recognition of the antigen-presenting molecule MR1.
J.Biol.Chem., 295, 2020
6XQQ
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BU of 6xqq by Molmil
Structure of human D462-E4 TCR
Descriptor: GLYCEROL, TRAV12-2 alpha chain, TRBV29-1
Authors:Awad, W, Rossjohn, J.
Deposit date:2020-07-10
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Atypical TRAV1-2 - T cell receptor recognition of the antigen-presenting molecule MR1.
J.Biol.Chem., 295, 2020

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