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4OB8
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BU of 4ob8 by Molmil
Crystal structure of a novel thermostable esterase from Pseudomonas putida ECU1011
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER
著者Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
登録日2014-01-07
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
4OB7
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BU of 4ob7 by Molmil
Crystal structure of esterase rPPE mutant W187H
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER
著者Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
登録日2014-01-07
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
4OU5
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BU of 4ou5 by Molmil
Crystal structure of esterase rPPE mutant S159A/W187H
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER
著者Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
登録日2014-02-15
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
4OU4
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BU of 4ou4 by Molmil
Crystal structure of esterase rPPE mutant S159A complexed with (S)-Ac-CPA
分子名称: (2S)-(acetyloxy)(2-chlorophenyl)ethanoic acid, Alpha/beta hydrolase fold-3 domain protein
著者Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
登録日2014-02-15
公開日2014-07-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
4OB6
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BU of 4ob6 by Molmil
Complex structure of esterase rPPE S159A/W187H and substrate (S)-Ac-CPA
分子名称: (2S)-(acetyloxy)(2-chlorophenyl)ethanoic acid, Alpha/beta hydrolase fold-3 domain protein
著者Dou, S, Kong, X.D, Ma, B.D, Chen, Q, Zhou, J.H, Xu, J.H.
登録日2014-01-07
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014
1T7P
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BU of 1t7p by Molmil
T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN
分子名称: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*CP*CP*TP*TP*GP*GP*CP*AP*CP*TP*GP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*2DA)-3'), ...
著者Doublie, S, Tabor, S, Long, A.M, Richardson, C.C, Ellenberger, T.
登録日1997-09-24
公開日1998-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution.
Nature, 391, 1998
1TDH
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BU of 1tdh by Molmil
Crystal structure of human endonuclease VIII-like 1 (NEIL1)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, nei endonuclease VIII-like 1
著者Doublie, S, Bandaru, V, Bond, J.P, Wallace, S.S.
登録日2004-05-22
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of human endonuclease VIII-like 1 (NEIL1) reveals a zincless finger motif required for glycosylase activity.
Proc.Natl.Acad.Sci.USA, 101, 2004
4RNC
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BU of 4rnc by Molmil
Crystal structure of an esterase RhEst1 from Rhodococcus sp. ECU1013
分子名称: Esterase, PHOSPHATE ION
著者Dou, S, Kong, X.D, Xu, J.H, Zhou, J.
登録日2014-10-23
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Substrate channel evolution of an esterase for the synthesis of Cilastatin
CATALYSIS SCIENCE AND TECHNOLOGY, 5, 2015
5Z9R
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BU of 5z9r by Molmil
NMNAT as a specific chaperone antagonizing pathological condensation of phosphorylated tau
分子名称: Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3
著者Dou, S, Ma, X, Li, D, Liu, C.
登録日2018-02-05
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nicotinamide mononucleotide adenylyltransferase uses its NAD+substrate-binding site to chaperone phosphorylated Tau.
Elife, 9, 2020
6GEU
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BU of 6geu by Molmil
Crystal structure of the C230A mutant of human IBA57
分子名称: Putative transferase CAF17, mitochondrial
著者Calderone, V, Ciofi-Baffoni, S, Gourdoupis, S, Banci, L, Nasta, V.
登録日2018-04-27
公開日2019-04-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献IBA57 Recruits ISCA2 to Form a [2Fe-2S] Cluster-Mediated Complex.
J.Am.Chem.Soc., 140, 2018
6QE4
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BU of 6qe4 by Molmil
Re-refinement of 5OLI human IBA57-I3C
分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, Putative transferase CAF17, mitochondrial
著者Calderone, V, Ciofi-Baffoni, S, Gourdoupis, S, Banci, L, Nasta, V.
登録日2019-01-04
公開日2019-03-13
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献In-house high-energy-remote SAD phasing using the magic triangle: how to tackle the P1 low symmetry using multiple orientations of the same crystal of human IBA57 to increase the multiplicity.
Acta Crystallogr D Struct Biol, 75, 2019
6QE3
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BU of 6qe3 by Molmil
Re-refinement of 6ESR human IBA57 at 1.75 A resolution
分子名称: Putative transferase CAF17, mitochondrial
著者Calderone, V, Ciofi-Baffoni, S, Gourdoupis, S, Banci, L.
登録日2019-01-04
公開日2019-03-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献In-house high-energy-remote SAD phasing using the magic triangle: how to tackle the P1 low symmetry using multiple orientations of the same crystal of human IBA57 to increase the multiplicity.
Acta Crystallogr D Struct Biol, 75, 2019
6KBH
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BU of 6kbh by Molmil
Crystal structure of an intact type IV self-sufficient cytochrome P450 monooxygenase
分子名称: Cytochrome P450 monooxygenase, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Gong, R, Wu, L.J, Zhang, Y, Liu, Z, Dou, S, Zhang, R.G, Xu, J.H, Tang, C, Zhou, J.H.
登録日2019-06-25
公開日2020-07-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of an intact type IV self-sufficient cytochrome P450 monooxygenase
To Be Published
3KNT
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BU of 3knt by Molmil
Crystal structure of Methanocaldococcus jannaschii 8-oxoguanine glycosylase/lyase in complex with 15mer DNA containing 8-oxoguanine
分子名称: 5'-D(*AP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*TP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3', N-glycosylase/DNA lyase, ...
著者Faucher, F, Doublie, S.
登録日2009-11-12
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The C-terminal Lysine of Ogg2 DNA Glycosylases is a Major Molecular Determinant for Guanine/8-Oxoguanine Distinction.
J.Mol.Biol., 397, 2010
3TWL
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BU of 3twl by Molmil
Crystal structure of Arabidopsis thaliana FPG
分子名称: Formamidopyrimidine-DNA glycosylase 1, GLYCEROL
著者Duclos, S, Aller, P, Wallace, S.S, Doublie, S.
登録日2011-09-22
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical studies of a plant formamidopyrimidine-DNA glycosylase reveal why eukaryotic Fpg glycosylases do not excise 8-oxoguanine.
Dna Repair, 11, 2012
3TWK
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BU of 3twk by Molmil
Crystal structure of arabidopsis thaliana FPG
分子名称: Formamidopyrimidine-DNA glycosylase 1, GLYCEROL
著者Duclos, S, Aller, P, Wallace, S.S, Doublie, S.
登録日2011-09-22
公開日2012-07-25
最終更新日2012-08-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and biochemical studies of a plant formamidopyrimidine-DNA glycosylase reveal why eukaryotic Fpg glycosylases do not excise 8-oxoguanine.
Dna Repair, 11, 2012
7RAG
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BU of 7rag by Molmil
Structure of the CwlD amidase from Clostridioides difficile in complex with the GerS lipoprotein
分子名称: 1,2-ETHANEDIOL, Germination-specific N-acetylmuramoyl-L-alanine amidase, Autolysin, ...
著者Eckenroth, B.E, Doublie, S.
登録日2021-07-01
公開日2021-09-08
最終更新日2021-10-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A lipoprotein allosterically activates the CwlD amidase during Clostridioides difficile spore formation.
Plos Genet., 17, 2021
2WNX
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BU of 2wnx by Molmil
3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum
分子名称: CALCIUM ION, FORMIC ACID, GLYCOSIDE HYDROLASE, ...
著者Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2009-07-20
公開日2009-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
2WOB
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BU of 2wob by Molmil
3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum. Orthorhombic structure
分子名称: CALCIUM ION, GLYCOSIDE HYDROLASE, FAMILY 9
著者Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2009-07-22
公開日2009-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
2WO4
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3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum, in-house data
分子名称: CALCIUM ION, CHLORIDE ION, GLYCOSIDE HYDROLASE, ...
著者Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
登録日2009-07-21
公開日2009-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
3RMA
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BU of 3rma by Molmil
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol
分子名称: DNA (5'-D(*CP*GP*AP*(CTG)*GP*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*CP*A)-3'), DNA polymerase
著者Aller, P, Duclos, S, Wallace, S.S, Doublie, S.
登録日2011-04-20
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献A crystallographic study of the role of sequence context in thymine glycol bypass by a replicative DNA polymerase serendipitously sheds light on the exonuclease complex.
J.Mol.Biol., 412, 2011
3RMC
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BU of 3rmc by Molmil
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol
分子名称: DNA (5'-D(*CP*GP*TP*(CTG)P*GP*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*CP*A)-3'), DNA polymerase
著者Aller, P, Duclos, S, Wallace, S.S, Doublie, S.
登録日2011-04-20
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A crystallographic study of the role of sequence context in thymine glycol bypass by a replicative DNA polymerase serendipitously sheds light on the exonuclease complex.
J.Mol.Biol., 412, 2011
3RMD
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BU of 3rmd by Molmil
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*TP*(CTG)P*G*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*CP*AP*A)-3'), ...
著者Aller, P, Duclos, S, Wallace, S.S, Doublie, S.
登録日2011-04-20
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献A crystallographic study of the role of sequence context in thymine glycol bypass by a replicative DNA polymerase serendipitously sheds light on the exonuclease complex.
J.Mol.Biol., 412, 2011
3RMB
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BU of 3rmb by Molmil
Crystal Structure of a replicative DNA polymerase bound to DNA containing Thymine Glycol
分子名称: DNA (5'-D(*CP*GP*CP*(CTG)P*GP*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*TP*CP*A)-3'), DNA polymerase, ...
著者Aller, P, Duclos, S, Wallace, S.S, Doublie, S.
登録日2011-04-20
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A crystallographic study of the role of sequence context in thymine glycol bypass by a replicative DNA polymerase serendipitously sheds light on the exonuclease complex.
J.Mol.Biol., 412, 2011
1SL0
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BU of 1sl0 by Molmil
Ternary 3' complex of T7 DNA polymerase with a DNA primer/template containing a disordered cis-syn thymine dimer on the template and an incoming nucleotide
分子名称: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3', ...
著者Li, Y, Dutta, S, Doublie, S, Bdour, H.M, Taylor, J.S, Ellenberger, T.
登録日2004-03-05
公開日2004-07-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004

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