Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3EE1
DownloadVisualize
BU of 3ee1 by Molmil
Novel fold of VirA, a type III secretion system effector protein from Shigella flexneri
Descriptor: Effector protein virA
Authors:Davis, J.S.
Deposit date:2008-09-03
Release date:2008-12-16
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Novel fold of VirA, a type III secretion system effector protein from Shigella flexneri
Protein Sci., 17, 2008
2PPS
DownloadVisualize
BU of 2pps by Molmil
PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY
Descriptor: CHLOROPHYLL A, IRON/SULFUR CLUSTER, PHOTOSYSTEM I, ...
Authors:Krauss, N, Schubert, W.-D, Klukas, O, Fromme, P, Witt, H.T, Saenger, W.
Deposit date:1997-05-27
Release date:1998-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4 Å)
Cite:Photosystem I at 4 A resolution represents the first structural model of a joint photosynthetic reaction centre and core antenna system.
Nat.Struct.Biol., 3, 1996
2PXS
DownloadVisualize
BU of 2pxs by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
3GB3
DownloadVisualize
BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3GL4
DownloadVisualize
BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3LKY
DownloadVisualize
BU of 3lky by Molmil
Monomeric Griffithsin with a Single Gly-Ser Insertion
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Griffithsin, ...
Authors:Moulaei, T, Wlodawer, A.
Deposit date:2010-01-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure, 18, 2010
3LL2
DownloadVisualize
BU of 3ll2 by Molmil
Monomeric Griffithsin in Complex with a High-Mannose Branched Carbohydrate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Griffithsin, ...
Authors:Moulaei, T, Wlodawer, A.
Deposit date:2010-01-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure, 18, 2010
3LL0
DownloadVisualize
BU of 3ll0 by Molmil
Monomeric Griffithsin with two Gly-Ser Insertions
Descriptor: GLYCEROL, Griffithsin, SULFATE ION
Authors:Moulaei, T, Wlodawer, A.
Deposit date:2010-01-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure, 18, 2010
3LL1
DownloadVisualize
BU of 3ll1 by Molmil
Monomeric Griffithsin with a Single Gly-Ser Insertion and Mutations to Remove Residual Self-Association
Descriptor: CHLORIDE ION, Griffithsin
Authors:Moulaei, T, Wlodawer, A.
Deposit date:2010-01-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure, 18, 2010
2ALD
DownloadVisualize
BU of 2ald by Molmil
HUMAN MUSCLE ALDOLASE
Descriptor: FRUCTOSE-BISPHOSPHATE ALDOLASE
Authors:Dalby, A.R, Littlechild, J.A.
Deposit date:1998-10-21
Release date:1999-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human muscle aldolase complexed with fructose 1,6-bisphosphate: mechanistic implications.
Protein Sci., 8, 1999
2BD1
DownloadVisualize
BU of 2bd1 by Molmil
A possible role of the second calcium ion in interfacial binding: Atomic and medium resolution crystal structures of the quadruple mutant of phospholipase A2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Phospholipase A2
Authors:Sekar, K, Velmurugan, D, Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2CST
DownloadVisualize
BU of 2cst by Molmil
CRYSTAL STRUCTURE OF THE CLOSED FORM OF CHICKEN CYTOSOLIC ASPARTATE AMINOTRANSFERASE AT 1.9 ANGSTROMS RESOLUTION
Descriptor: ASPARTATE AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Malashkevich, V.N, Strokopytov, B.V, Borisov, V.V.
Deposit date:1994-09-06
Release date:1994-11-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the closed form of chicken cytosolic aspartate aminotransferase at 1.9 A resolution.
J.Mol.Biol., 247, 1995
2B96
DownloadVisualize
BU of 2b96 by Molmil
Third Calcium ion found in an inhibitor bound phospholipase A2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-METHOXYBENZOIC ACID, CALCIUM ION, ...
Authors:Sekar, K, Velmurugan, D, Yamane, T, Tsai, M.D.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Third Calcium ion found in an inhibitor bound phospholipase A2
Acta Crystallogr.,Sect.D, 62, 2006
5EBI
DownloadVisualize
BU of 5ebi by Molmil
Crystal structure of a DNA-RNA chimera in complex with Ba2+ ions: a case of unusual multi-domain twinning
Descriptor: BARIUM ION, DNA/RNA (5'-D(*C)-R(P*G)-D(P*C)-R(P*G)-D(P*C)-R(P*G)-3')
Authors:Gilski, M, Drozdzal, P, Kierzek, R, Jaskolski, M.
Deposit date:2015-10-19
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Atomic resolution structure of a chimeric DNA-RNA Z-type duplex in complex with Ba(2+) ions: a case of complicated multi-domain twinning.
Acta Crystallogr D Struct Biol, 72, 2016
5EXB
DownloadVisualize
BU of 5exb by Molmil
Wild type green fluorescent protein DendFP (Dendronephthya sp.)
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
5EXC
DownloadVisualize
BU of 5exc by Molmil
Photoconverted red fluorescent protein DendRFP
Descriptor: GLYCEROL, Green fluorescent protein, MAGNESIUM ION
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
4HE4
DownloadVisualize
BU of 4he4 by Molmil
Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)
Descriptor: Yellow fluorescent protein
Authors:Pletneva, N, Pletnev, S, Pletnev, V.Z.
Deposit date:2012-10-03
Release date:2013-05-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
Acta Crystallogr.,Sect.D, 69, 2013
4HVF
DownloadVisualize
BU of 4hvf by Molmil
Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
Descriptor: GLYCEROL, Green fluorescent protein blFP-Y6
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2012-11-06
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JGE
DownloadVisualize
BU of 4jge by Molmil
Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-03-01
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JEO
DownloadVisualize
BU of 4jeo by Molmil
Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-27
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JF9
DownloadVisualize
BU of 4jf9 by Molmil
Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum)
Descriptor: Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-28
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JHG
DownloadVisualize
BU of 4jhg by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, MALONATE ION, MtN13 protein, ...
Authors:Ruszkowski, M, Tusnio, K, Ciesielska, A, Brzezinski, K, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon