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419D
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OCTAMER 5'-R(*GP*UP*AP*UP*AP*CP*A)-D(P*C)-3' WITH SIX WATSON-CRICK BASE-PAIRS AND TWO 3' OVERHANG RESIDUES
分子名称: DNA/RNA (5'-R(*GP*UP*AP*UP*AP*CP*A)-D(P*C)-3')
著者Mitra, S.M, Shi, K, Biswas, R, Sundaralingam, M.
登録日1998-08-12
公開日2000-05-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the octamer [r(guauaca)dC]2 with six Watson-Crick base-pairs and two 3' overhang residues.
J.Mol.Biol., 299, 2000
472D
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STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS
分子名称: RNA (5'-R(*GP*UP*AP*GP*GP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*UP*UP*UP*AP*C)-3')
著者Deng, J, Sundaralingam, M.
登録日1999-05-14
公開日2000-11-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Synthesis and crystal structure of an octamer RNA r(guguuuac)/r(guaggcac) with G.G/U.U tandem wobble base pairs: comparison with other tandem G.U pairs.
Nucleic Acids Res., 28, 2000
331D
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CRYSTAL STRUCTURE OF D(GCGCGCG) WITH 5'-OVERHANG G'S
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*GP*CP*GP*CP*G)-3')
著者Pan, B, Ban, C, Wahl, M, Sundaralingam, M.
登録日1997-05-13
公開日1997-09-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of d(GCGCGCG) with 5'-overhang G residues.
Biophys.J., 73, 1997
1JO2
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Crystal Structure of the B-DNA Hexamer (CgATCG).Daunomycin Complex Containing a Ribose at the Intercalation Site
分子名称: 5'-D(*C)-R(P*G)-D(P*AP*TP*CP*G)-3', DAUNOMYCIN
著者Shi, K, Pan, B, Sundaralingam, M.
登録日2001-07-26
公開日2003-07-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a B-form DNA/RNA chimera (dC)(rG)d(ATCG) complexed with daunomycin at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1JS2
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Crystal structure of C77S HiPIP: a serine ligated [4Fe-4S] cluster
分子名称: IRON/SULFUR CLUSTER, high-potential iron protein
著者Mansy, S.S, Xiong, Y, Hemann, C, Hille, R, Sundaralingam, M, Cowan, J.A.
登録日2001-08-16
公開日2002-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and stability studies of C77S HiPIP: a serine ligated [4Fe-4S] cluster.
Biochemistry, 41, 2002
1JUX
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1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side
分子名称: 5'-D(*IP*TP*IP*TP*AP*CP*AP*C)-3', DISTAMYCIN A
著者Deng, J, Pan, B, Sundaralingam, M.
登録日2001-08-28
公開日2004-01-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of d(ITITACAC) complexed with distamycin at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1L3Z
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Crystal Structure Analysis of an RNA Heptamer
分子名称: 5'-R(*GP*UP*AP*UP*AP*CP*A)-3', SODIUM ION
著者Shi, K, Pan, B, Sundaralingam, M.
登録日2002-03-04
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The crystal structure of an alternating RNA heptamer r(GUAUACA) forming a six base-paired duplex with 3'-end adenine overhangs
Nucleic Acids Res., 31, 2003
1LNT
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Crystal Structure of the Highly Conserved RNA Internal Loop of SRP
分子名称: 5'-R(*CP*GP*GP*AP*AP*GP*CP*AP*GP*(CBV)P*GP*C)-3', 5'-R(*GP*CP*GP*UP*CP*AP*GP*GP*UP*CP*(CBV)P*G)-3', CALCIUM ION, ...
著者Deng, J, Xiong, Y, Pan, B, Sundaralingam, M.
登録日2002-05-03
公開日2003-06-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of an RNA dodecamer containing a fragment from SRP domain IV of Escherichia coli.
Acta Crystallogr.,Sect.D, 59, 2003
1M6R
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Crystal structure of rGd(CGCGCG) forming hexamer Z-DNA duplex with 5'-(rG) overhang
分子名称: 5'-R(*G)D(*CP*GP*CP*GP*CP*G)-3'
著者Pan, B, Sundaralingam, M.
登録日2002-07-17
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of rGd(CGCGCG): a Z-DNA hexamer duplex with a 5'-(rG) overhang.
Acta Crystallogr.,Sect.D, 59, 2003
1MDG
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An Alternating Antiparallel Octaplex in an RNA Crystal Structure
分子名称: 5'-R(*UP*(BGM)GP*AP*GP*GP*U)-3', COBALT HEXAMMINE(III), SODIUM ION
著者Pan, B.C, Xiong, Y, Shi, K, Sundaralingam, M.
登録日2002-08-07
公開日2003-08-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An Eight-Stranded Helical Fragment in RNA Crystal Structure: Implications for Tetraplex Interaction
Structure, 11, 2003
1M77
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Near Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNA
分子名称: 5'-D(*CP*CP*CP*GP*AP*TP*CP*GP*GP*G)-3', COBALT HEXAMMINE(III)
著者Ramakrishnan, B, Sekharudu, C, Pan, B.C, Sundaralingam, M.
登録日2002-07-18
公開日2003-01-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Near-atomic resolution crystal structure of an A-DNA decamer d(CCCGATCGGG): cobalt hexammine interaction with A-DNA.
Acta Crystallogr.,Sect.D, 59, 2003
1P79
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Crystal structure of a bulged RNA tetraplex: implications for a novel binding site in RNA tetraplex
分子名称: 5'-R(*UP*GP*UP*GP*GP*U)-3', POTASSIUM ION
著者Pan, B, Xiong, Y, Shi, K, Sundaralingam, M.
登録日2003-04-30
公開日2003-11-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal Structure of a Bulged RNA Tetraplex at 1.1 A Resolution: Implications for a Novel Binding Site in RNA Tetraplex
STRUCTURE, 11, 2003
1OSU
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STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU-OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS
分子名称: RNA (5'-R(*UP*UP*CP*GP*CP*G)-3')
著者Wahl, M.C, Rao, S.T, Sundaralingam, M.
登録日1995-11-08
公開日1996-04-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structure of r(UUCGCG) has a 5'-UU-overhang exhibiting Hoogsteen-like trans U.U base pairs.
Nat.Struct.Biol., 3, 1996
326D
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CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-ORTHOGONAL FORM
分子名称: DNA (5'-D(*CP*(5CM)P*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3'), SPERMINE
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997
393D
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CRYSTAL STRUCTURE OF TWO SELF-COMPLEMENTARY CHIMERIC DECAMER D(CCGG)R(C)D(GCCGG) AND D(CCGG)R(CG)D(CCGG)
分子名称: DNA/RNA (5'-D(*CP*CP*GP*GP)-R(*CP)-D(*GP*CP*CP*GP*G)-3')
著者Ban, C, Sundaralingam, M, Ramakrishnan, B.
登録日1998-04-29
公開日1998-05-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Two Self-Complementary Chimeric Decamer d(CCGG)r(C)d(GCCGG) and d(CCGG)r(CG)d(CCGG)
To be Published
317D
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STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS
分子名称: DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3')
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of d(CCCTAGGG): comparison with nine isomorphous octamer sequences reveals four distinct patterns of sequence-dependent intermolecular interactions.
Acta Crystallogr.,Sect.D, 52, 1996
327D
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CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)
分子名称: DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3')
著者Tippin, D.B, Ramakrishnan, B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: crystal structure of d(Gm5CGm5CGCGCGC).
J.Mol.Biol., 270, 1997
322D
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CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3')
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997
378D
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STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA
分子名称: DISTAMYCIN A, DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3'), SODIUM ION
著者Mitra, S.N, Wahl, M.C, Sundaralingam, M.
登録日1998-01-28
公開日1999-03-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the side-by-side binding of distamycin to d(GTATATAC)2.
Acta Crystallogr.,Sect.D, 55, 1999
394D
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CRYSTAL STRUCTURE OF TWO SELF-COMPLEMENTARY CHIMERIC DECAMERS D(CCGG)R(C)D(GCCGG) AND D(CCGG)R(CG)D(CCGG)
分子名称: DNA/RNA (5'-D(*CP*CP*GP*GP)-R(*CP*GP)-D(*CP*CP*GP*G)-3')
著者Ban, C, Sundaralingam, M.
登録日1998-04-29
公開日1998-05-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Two Self-Complementary Chimeric Decamers d(CCGG)r(C)d(GCCGG) and d(CCGG)r(CG)d(CCGG)
To be Published
321D
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CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'), SPERMINE
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997
332D
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CRYSTAL STRUCTURE OF R(GUGUGUA)D(C) WITH TANDEM G-U/U-G WOBBLE PAIRS WITH STRAND SLIPPAGE
分子名称: DNA/RNA (5'-R(*GP*UP*GP*UP*GP*UP*AP*)-D(*C)-3')
著者Biswas, R, Sundaralingam, M.
登録日1997-05-14
公開日1997-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of r(GUGUGUA)dC with tandem G x U/U x G wobble pairs with strand slippage.
J.Mol.Biol., 270, 1997
318D
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CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORM
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(CBR)P*GP*G)-3')
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997
358D
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CRYSTAL STRUCTURE OF THE 2:1 NETROPSIN-DNA DECAMER D(CBRCCCCIIIII) COMPLEX WITH END-TO-END BINDING
分子名称: DNA (5'-D(*CP*(CBR)P*CP*CP*CP*IP*IP*IP*IP*I)-3'), NETROPSIN
著者Mitra, S.N, Chen, X, Sundaralingam, M.
登録日1997-10-20
公開日2000-05-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A novel end-to-end binding of two netropsins to the DNA decamers d(CCCCCIIIII)2, d(CCCBr5CCIIIII)2and d(CBr5CCCCIIIII)2.
Nucleic Acids Res., 26, 1998
320D
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CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'), SPERMINE
著者Tippin, D.B, Sundaralingam, M.
登録日1997-03-17
公開日1997-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol., 267, 1997

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