5BZ6
 
 | | Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme | | Descriptor: | Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION | | Authors: | Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H. | | Deposit date: | 2015-06-11 | | Release date: | 2015-09-16 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.75 Å) | | Cite: | Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
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5HZY
 | | Crystal structure of the legionella pneumophila effector protein RavZ - P6322 | | Descriptor: | Uncharacterized protein RavZ | | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | | Deposit date: | 2016-02-03 | | Release date: | 2016-11-09 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.548 Å) | | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
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5IO3
 | | Crystal structure of the legionella pneumophila effector protein RavZ - I422 | | Descriptor: | Uncharacterized protein RavZ | | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | | Deposit date: | 2016-03-08 | | Release date: | 2016-11-09 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.74 Å) | | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
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3NIH
 | | The structure of UBR box (RIAAA) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide RIAAA, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIL
 | | The structure of UBR box (RDAA) | | Descriptor: | ACETATE ION, E3 ubiquitin-protein ligase UBR1, Peptide RDAA, ... | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIK
 | | The structure of UBR box (REAA) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide REAA, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIS
 | | The structure of UBR box (native2) | | Descriptor: | ACETATE ION, E3 ubiquitin-protein ligase UBR1, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.68 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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5IZV
 | | Crystal structure of the legionella pneumophila effector protein RavZ - F222 | | Descriptor: | Uncharacterized protein RavZ | | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | | Deposit date: | 2016-03-26 | | Release date: | 2016-11-09 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.814 Å) | | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
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3NII
 | | The structure of UBR box (KIAA) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide KIAA, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIM
 | | The structure of UBR box (RRAA) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide RRAA, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIJ
 | | The structure of UBR box (HIAA) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide HIAA, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIN
 | | The structure of UBR box (RLGES) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, Peptide RLGES, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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3NIT
 | | The structure of UBR box (native1) | | Descriptor: | E3 ubiquitin-protein ligase UBR1, ZINC ION | | Authors: | Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. | | Deposit date: | 2010-06-16 | | Release date: | 2010-09-15 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
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6KGJ
 | | M1Q-hNTAQ1 C28S | | Descriptor: | Protein N-terminal glutamine amidohydrolase | | Authors: | Park, M.R, Kim, L, Kwon, D.H, Song, H.K. | | Deposit date: | 2019-07-11 | | Release date: | 2020-01-22 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway.
J.Biol.Chem., 295, 2020
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6L18
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6LHN
 | | RLGSGG-AtPRT6 UBR box | | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | | Authors: | Kim, L, Kwon, D.H, Song, H.K. | | Deposit date: | 2019-12-09 | | Release date: | 2020-01-22 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway.
J.Biol.Chem., 295, 2020
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7D34
 | | AtClpS1-peptide complex | | Descriptor: | ACETIC ACID, ALANINE, ATP-dependent Clp protease adapter protein CLPS1, ... | | Authors: | Heo, J, Kim, L, Kwon, D.H, Song, H.K. | | Deposit date: | 2020-09-18 | | Release date: | 2021-04-28 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.007 Å) | | Cite: | Structural basis for the N-degron specificity of ClpS1 from Arabidopsis thaliana.
Protein Sci., 30, 2021
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7FER
 | | Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2 | | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | | Deposit date: | 2021-07-21 | | Release date: | 2022-07-06 | | Last modified: | 2022-07-20 | | Method: | ELECTRON MICROSCOPY (3.4 Å) | | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
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7FEQ
 | | Cryo-EM structure of apo BsClpP at pH 6.5 | | Descriptor: | ATP-dependent Clp protease proteolytic subunit | | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | | Deposit date: | 2021-07-21 | | Release date: | 2022-07-06 | | Last modified: | 2022-07-20 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
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7FES
 | | Cryo-EM structure of apo BsClpP at pH 4.2 | | Descriptor: | ATP-dependent Clp protease proteolytic subunit | | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | | Deposit date: | 2021-07-21 | | Release date: | 2022-07-06 | | Last modified: | 2022-07-20 | | Method: | ELECTRON MICROSCOPY (3.4 Å) | | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
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7FEP
 | | Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5 | | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | | Deposit date: | 2021-07-21 | | Release date: | 2022-07-06 | | Last modified: | 2022-07-20 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
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7XV2
 | | TRIM E3 ubiquitin ligase | | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | | Authors: | Park, S.H, Song, H.K. | | Deposit date: | 2022-05-20 | | Release date: | 2023-05-24 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.75 Å) | | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
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7XZ0
 | | TRIM E3 ubiquitin ligase | | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | | Authors: | Park, S.H, Song, H.K. | | Deposit date: | 2022-06-02 | | Release date: | 2023-07-12 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (3.28 Å) | | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
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7XZ1
 | | TRIM E3 ubiquitin ligase | | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | | Authors: | Park, S.H, Song, H.K. | | Deposit date: | 2022-06-02 | | Release date: | 2023-07-12 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (5.2 Å) | | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
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7XYY
 | | TRIM E3 ubiquitin ligase WT | | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | | Authors: | Park, S.H, Song, H.K. | | Deposit date: | 2022-06-02 | | Release date: | 2023-07-12 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (7.1 Å) | | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
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