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2V3V
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BU of 2v3v by Molmil
A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM ATOM, ...
著者Najmudin, S, Gonzalez, P.J, Trincao, J, Coelho, C, Mukhopadhyay, A, Romao, C.C, Moura, I, Moura, J.J, Brondino, C.D, Romao, M.J.
登録日2007-06-22
公開日2008-03-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Periplasmic Nitrate Reductase Revisited: A Sulfur Atom Completes the Sixth Coordination of the Catalytic Molybdenum.
J.Biol.Inorg.Chem., 13, 2008
3ERX
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BU of 3erx by Molmil
High-resolution structure of Paracoccus pantotrophus pseudoazurin
分子名称: COPPER (II) ION, Pseudoazurin, SULFATE ION
著者Najmudin, S, Pauleta, S.R, Moura, I, Romao, M.J.
登録日2008-10-03
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The 1.4 A resolution structure of Paracoccus pantotrophus pseudoazurin.
Acta Crystallogr.,Sect.F, 66, 2010
3FAH
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Glycerol inhibited form of Aldehyde oxidoreductase from Desulfovibrio gigas
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), Aldehyde oxidoreductase, CHLORIDE ION, ...
著者Santos-Silva, T, Romao, M.J.
登録日2008-11-17
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Kinetic, structural, and EPR studies reveal that aldehyde oxidoreductase from Desulfovibrio gigas does not need a sulfido ligand for catalysis and give evidence for a direct Mo-C interaction in a biological system.
J.Am.Chem.Soc., 131, 2009
3FC4
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Ethylene glycol inhibited form of Aldehyde oxidoreductase from Desulfovibrio gigas
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), 1,2-ETHANEDIOL, Aldehyde oxidoreductase, ...
著者Santos-Silva, T, Romao, M.J.
登録日2008-11-21
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Kinetic, structural, and EPR studies reveal that aldehyde oxidoreductase from Desulfovibrio gigas does not need a sulfido ligand for catalysis and give evidence for a direct Mo-C interaction in a biological system.
J.Am.Chem.Soc., 131, 2009
4US9
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BU of 4us9 by Molmil
Aldehyde Oxidoreductase from Desulfovibrio gigas (MOP), soaked with 3- phenylpropionaldehyde
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), 3-PHENYLPROPANAL, ALDEHYDE OXIDOREDUCTASE, ...
著者Correia, H.D, Romao, M.J, Santos-Silva, T.
登録日2014-07-03
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Aromatic Aldehydes at the Active Site of Aldehyde Oxidoreductase from Desulfovibrio Gigas: Reactivity and Molecular Details of the Enzyme-Substrate and Enzyme-Product Interaction.
J.Biol.Inorg.Chem., 20, 2015
4USA
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Aldehyde Oxidoreductase from Desulfovibrio gigas (MOP), soaked with trans-cinnamaldehyde
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ALDEHYDE OXIDOREDUCTASE, BICARBONATE ION, ...
著者Correia, H.D, Romao, M.J, Santos-Silva, T.
登録日2014-07-03
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Aromatic Aldehydes at the Active Site of Aldehyde Oxidoreductase from Desulfovibrio Gigas: Reactivity and Molecular Details of the Enzyme-Substrate and Enzyme-Product Interaction.
J.Biol.Inorg.Chem., 20, 2015
4US8
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Aldehyde Oxidoreductase from Desulfovibrio gigas (MOP), soaked with benzaldehyde
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), ALDEHYDE OXIDOREDUCTASE, BICARBONATE ION, ...
著者Correia, H.D, Romao, M.J, Santos-Silva, T.
登録日2014-07-03
公開日2014-10-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Aromatic Aldehydes at the Active Site of Aldehyde Oxidoreductase from Desulfovibrio Gigas: Reactivity and Molecular Details of the Enzyme-Substrate and Enzyme-Product Interaction.
J.Biol.Inorg.Chem., 20, 2015
6SDV
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BU of 6sdv by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
著者Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
登録日2019-07-29
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
6SDR
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W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, alpha subunit, ...
著者Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
登録日2019-07-29
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
7OPN
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BU of 7opn by Molmil
Human Aldehyde Oxidase SNP R1231H in complex with Raloxifene
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Aldehyde oxidase, DIMETHYL SULFOXIDE, ...
著者Mota, C, Coelho, C, Santos Silva, T, Romao, M.J.
登録日2021-06-01
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Interrogating the Inhibition Mechanisms of Human Aldehyde Oxidase by X-ray Crystallography and NMR Spectroscopy: The Raloxifene Case.
J.Med.Chem., 64, 2021
7ORC
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BU of 7orc by Molmil
Human Aldehyde Oxidase in complex with Raloxifene
分子名称: Aldehyde oxidase, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Mota, C, Coelho, C, Santos Silva, T, Romao, M.J.
登録日2021-06-05
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Interrogating the Inhibition Mechanisms of Human Aldehyde Oxidase by X-ray Crystallography and NMR Spectroscopy: The Raloxifene Case.
J.Med.Chem., 64, 2021
7Q8E
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BU of 7q8e by Molmil
Crystal Structure of the MurT-GatD Enzyme Complex from Staphylococcus aureus COL strain
分子名称: CHLORIDE ION, Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD, Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT, ...
著者Leisico, F, Romao, M.J, Santos-Silva, T.
登録日2021-11-11
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.90001726 Å)
主引用文献Crystal Structure of the MurT-GatD Enzyme Complex from Staphylococcus aureus COL strain
To Be Published
1RZ6
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BU of 1rz6 by Molmil
Di-haem Cytochrome c Peroxidase, Form IN
分子名称: CITRIC ACID, Cytochrome c peroxidase, HEME C
著者Dias, J.M, Alves, T, Bonifacio, C, Pereira, A, Bourgeois, D, Moura, I, Romao, M.J.
登録日2003-12-24
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
1RZ5
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Di-haem Cytochrome c Peroxidase, Form OUT
分子名称: CALCIUM ION, Cytochrome c peroxidase, HEME C
著者Dias, J.M, Alves, T, Bonifacio, C, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
登録日2003-12-24
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
5K39
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BU of 5k39 by Molmil
THE TYPE II COHESIN DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM
分子名称: CALCIUM ION, Cellulosome anchoring protein cohesin region, Dockerin module from a protein of unknown function
著者Viegas, A, Pinheiro, B, Bras, J.L.A, Romao, M.J, Alves, V, Carvalho, A.L, Fontes, C.M.G.A.
登録日2016-05-19
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Diverse specificity of cellulosome attachment to the bacterial cell surface.
Sci Rep, 6, 2016
5LU3
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The Structure of Spirochaeta thermophila CBM64
分子名称: 3,6,9,12,15-pentaoxaoctadecan-17-amine, 4-oxobutanoic acid, CALCIUM ION, ...
著者Correia, M.A.S, Romao, M.J, Carvalho, A.L.
登録日2016-09-07
公開日2017-02-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Stability and Ligand Promiscuity of Type A Carbohydrate-binding Modules Are Illustrated by the Structure of Spirochaeta thermophila StCBM64C.
J. Biol. Chem., 292, 2017
1Y07
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BU of 1y07 by Molmil
Crystal structure of the superoxide reductase from Treponema pallidum
分子名称: FE (III) ION, MAGNESIUM ION, desulfoferrodoxin (rbo)
著者Santos-Silva, T, Trincao, J, Carvalho, A.L, Bonifacio, C, Auchere, F, Moura, J, Romao, M.J.
登録日2004-11-15
公開日2005-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The first crystal structure of class III superoxide reductase from Treponema pallidum.
J.Biol.Inorg.Chem., 11, 2006
1Z1N
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BU of 1z1n by Molmil
Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, HEME C, ...
著者Santos-Silva, T, Dias, J.M, Romao, M.J.
登録日2005-03-04
公開日2006-04-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas
to be published
2C26
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BU of 2c26 by Molmil
Structural basis for the promiscuous specificity of the carbohydrate- binding modules from the beta-sandwich super family
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOGLUCANASE
著者Najmudin, S, Guerreiro, C.I.P.D, Carvalho, A.L, Bolam, D.N, Prates, J.A.M, Correia, M.A.S, Alves, V.D, Ferreira, L.M.A, Romao, M.J, Gilbert, H.J, Fontes, C.M.G.A.
登録日2005-09-26
公開日2005-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Xyloglucan is Recognized by Carbohydrate-Binding Modules that Interact with Beta-Glucan Chains.
J.Biol.Chem., 281, 2006
2C4X
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BU of 2c4x by Molmil
Structural basis for the promiscuous specificity of the carbohydrate- binding modules from the beta-sandwich super family
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOGLUCANASE
著者Najmudin, S, Guerreiro, C.I.P.D, Carvalho, A.L, Bolam, D.N, Prates, J.A.M, Correia, M.A.S, Alves, V.D, Ferreira, L.M.A, Romao, M.J, Gilbert, H.J, Fontes, C.M.G.A.
登録日2005-10-25
公開日2005-10-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Xyloglucan is Recognized by Carbohydrate-Binding Modules that Interact with Beta-Glucan Chains.
J.Biol.Chem., 281, 2006
6FF9
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Mutant R280K of human P53
分子名称: Cellular tumor antigen p53, ZINC ION
著者Trovao, F.G, Gomes, A.S, Pinheiro, B, Carvalho, A.L, Romao, M.J.
登録日2018-01-04
公開日2018-04-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of the R280K Mutant of Human p53 Explains the Loss of DNA Binding.
Int J Mol Sci, 19, 2018
2W5F
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BU of 2w5f by Molmil
High resolution crystallographic structure of the Clostridium thermocellum N-terminal endo-1,4-beta-D-xylanase 10B (Xyn10B) CBM22-1- GH10 modules complexed with xylohexaose
分子名称: ACETATE ION, CADMIUM ION, ENDO-1,4-BETA-XYLANASE Y, ...
著者Najmudin, S, Pinheiro, B.A, Romao, M.J, Prates, J.A.M, Fontes, C.M.G.A.
登録日2008-12-10
公開日2010-01-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Putting an N-Terminal End to the Clostridium Thermocellum Xylanase Xyn10B Story: Crystal Structure of the Cbm22-1-Gh10 Modules Complexed with Xylohexaose.
J.Struct.Biol., 172, 2010
2WFB
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BU of 2wfb by Molmil
High resolution structure of the apo form of the orange protein (ORP) from Desulfovibrio gigas
分子名称: ACETATE ION, PHOSPHATE ION, PUTATIVE UNCHARACTERIZED PROTEIN ORP
著者Najmudin, S, Bonifacio, C, Duarte, A.G, Pereira, A.S, Moura, I, Moura, J.M, Romao, M.J.
登録日2009-04-03
公開日2010-05-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High Resolution Crystal Structure of the Apo Form of the Orange Protein (Apo-Orp) from Desulfovibrio Gigas
To be Published
2WZE
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High resolution crystallographic structure of the Clostridium thermocellum N-terminal endo-1,4-beta-D-xylanase 10B (Xyn10B) CBM22-1- GH10 modules complexed with xylohexaose
分子名称: CALCIUM ION, ENDO-1,4-BETA-XYLANASE Y, GLYCEROL, ...
著者Najmudin, S, Pinheiro, B.A, Romao, M.J, Prates, J.A.M, Fontes, C.M.G.A.
登録日2009-11-27
公開日2010-08-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Putting an N-Terminal End to the Clostridium Thermocellum Xylanase Xyn10B Story: Crystal Structure of the Cbm22-1-Gh10 Modules Complexed with Xylohexaose.
J.Struct.Biol., 172, 2010
2WYS
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BU of 2wys by Molmil
High resolution crystallographic structure of the Clostridium thermocellum N-terminal endo-1,4-beta-D-xylanase 10B (Xyn10B) CBM22-1- GH10 modules complexed with xylohexaose
分子名称: CALCIUM ION, ENDO-1,4-BETA-XYLANASE Y, PHOSPHATE ION, ...
著者Najmudin, S, Pinheiro, B.A, Romao, M.J, Prates, J.A.M, Fontes, C.M.G.A.
登録日2009-11-20
公開日2010-08-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Putting an N-Terminal End to the Clostridium Thermocellum Xylanase Xyn10B Story: Crystal Structure of the Cbm22-1-Gh10 Modules Complexed with Xylohexaose.
J.Struct.Biol., 172, 2010

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