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4EN5
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BU of 4en5 by Molmil
Crystal structure of fluoride riboswitch, Tl-Acetate soaked
分子名称: FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ...
著者Ren, A.M, Rajashankar, K.R, Patel, D.J.
登録日2012-04-12
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.957 Å)
主引用文献Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4ENA
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BU of 4ena by Molmil
Crystal structure of fluoride riboswitch, soaked in Cs+
分子名称: CESIUM ION, FLUORIDE ION, Fluoride riboswitch, ...
著者Ren, A.M, Rajashankar, K.R, Patel, D.J.
登録日2012-04-12
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4ENB
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BU of 4enb by Molmil
Crystal structure of fluoride riboswitch, bound to Iridium
分子名称: FLUORIDE ION, Fluoride riboswitch, IRIDIUM HEXAMMINE ION, ...
著者Ren, A.M, Rajashankar, K.R, Patel, D.J.
登録日2012-04-12
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4QLM
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BU of 4qlm by Molmil
ydao riboswitch binding to c-di-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, RNA (108-MER), ...
著者Ren, A.M, Patel, D.J.
登録日2014-06-12
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.721 Å)
主引用文献c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.
Nat.Chem.Biol., 10, 2014
4ENC
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BU of 4enc by Molmil
Crystal structure of fluoride riboswitch
分子名称: FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ...
著者Ren, A.M, Rajashankar, K.R, Patel, D.J.
登録日2012-04-12
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.272 Å)
主引用文献Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4QLN
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BU of 4qln by Molmil
structure of ydao riboswitch binding with c-di-dAMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, RNA (117-MER)
著者Ren, A.M, Patel, D.J.
登録日2014-06-12
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.
Nat.Chem.Biol., 10, 2014
3VRS
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BU of 3vrs by Molmil
Crystal structure of fluoride riboswitch, soaked in Mn2+
分子名称: FLUORIDE ION, Fluoride riboswitch, MANGANESE (II) ION, ...
著者Ren, A.M, Rajashankar, K.R, Patel, D.J.
登録日2012-04-13
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
8GXC
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BU of 8gxc by Molmil
Crystal structure of NAD+ -II riboswitch in complex with NMN
分子名称: 61-mer RNA, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MAGNESIUM ION, ...
著者Xu, X.C, Ren, A.M.
登録日2022-09-19
公開日2023-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based investigations of the NAD+-II riboswitch.
Nucleic Acids Res., 51, 2023
8GXB
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BU of 8gxb by Molmil
Crystal structure of NAD+ -II riboswitch in complex with NAD+
分子名称: MAGNESIUM ION, NAD+ II riboswitch, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Xu, X.C, Ren, A.M.
登録日2022-09-19
公開日2023-01-18
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-based investigations of the NAD+-II riboswitch.
Nucleic Acids Res., 51, 2023
7D7X
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BU of 7d7x by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine diphosphate (ADP)
分子名称: 18GAAA(52-MER), ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.631 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D7W
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BU of 7d7w by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
分子名称: 18GAAA (52-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.391 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D82
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BU of 7d82 by Molmil
Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
分子名称: 832GAAA (50-MER), MAGNESIUM ION, MANGANESE (II) ION, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.489 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D81
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BU of 7d81 by Molmil
Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
分子名称: 832GAAA (50-MER), MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D7Y
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BU of 7d7y by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine triphosphate (ATP)
分子名称: 18GAAA (52-MER), ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D7V
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BU of 7d7v by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein
分子名称: 17delU1A (58-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D7Z
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BU of 7d7z by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
分子名称: 18GAAA(52-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7XFA
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BU of 7xfa by Molmil
Structure of human Galectin-3 CRD in complex with monosaccharide inhibitor
分子名称: (2~{S},3~{R},4~{R},5~{R},6~{R})-4-[4-[4-chloranyl-3,5-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-[2-[5-chloranyl-2-(trifluoromethyl)phenyl]-5-methyl-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,5-diol, Galectin-3
著者Shukla, J, Raman, S, Ghosh, K.
登録日2022-04-01
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Identification of Monosaccharide Derivatives as Potent, Selective, and Orally Bioavailable Inhibitors of Human and Mouse Galectin-3.
J.Med.Chem., 65, 2022
7CXA
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BU of 7cxa by Molmil
Structure of human Galectin-3 CRD in complex with TD-139 belonging to P31 space group.
分子名称: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, CHLORIDE ION, Galectin-3
著者Kumar, A.
登録日2020-09-01
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Molecular mechanism of interspecies differences in the binding affinity of TD139 to Galectin-3.
Glycobiology, 31, 2021
7CXB
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BU of 7cxb by Molmil
Structure of mouse Galectin-3 CRD in complex with TD-139 belonging to P6522 space group.
分子名称: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, CHLORIDE ION, Galectin-3
著者Kumar, A.
登録日2020-09-01
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Molecular mechanism of interspecies differences in the binding affinity of TD139 to Galectin-3.
Glycobiology, 31, 2021
7CXD
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BU of 7cxd by Molmil
Xray structure of rat Galectin-3 CRD in complex with TD-139 belonging to P121 space group
分子名称: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, BROMIDE ION, Galectin-3
著者Kumar, A.
登録日2020-09-01
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Molecular mechanism of interspecies differences in the binding affinity of TD139 to Galectin-3.
Glycobiology, 31, 2021
7CXC
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BU of 7cxc by Molmil
Structure of mouse Galectin-3 CRD point mutant (V160A) in complex with TD-139 belonging to P121 space group.
分子名称: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, Galectin-3
著者Kumar, A.
登録日2020-09-01
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Molecular mechanism of interspecies differences in the binding affinity of TD139 to Galectin-3.
Glycobiology, 31, 2021
4NLD
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BU of 4nld by Molmil
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with BMS-791325 also known as (1aR,12bS)-8-cyclohexyl-n-(dimethylsulfamoyl)-11-methoxy-1a-{[(1R,5S)-3-methyl-3,8-diazabicyclo[3.2.1]oct-8-yl]carbonyl}-1,1a,2,12b-tetrahydrocyclopropa[d]indolo[2,1-a][2]benzazepine-5-carboxamide and 2-(4-fluorophenyl)-n-methyl-6-[(methylsulfonyl)amino]-5-(propan-2-yloxy)-1-benzofuran-3-carboxamide
分子名称: (1aR,12bS)-8-cyclohexyl-N-(dimethylsulfamoyl)-11-methoxy-1a-{[(1R,5S)-3-methyl-3,8-diazabicyclo[3.2.1]oct-8-yl]carbonyl}-1,1a,2,12b-tetrahydrocyclopropa[d]indolo[2,1-a][2]benzazepine-5-carboxamide, 2-(4-fluorophenyl)-N-methyl-6-[(methylsulfonyl)amino]-5-(propan-2-yloxy)-1-benzofuran-3-carboxamide, RNA-directed RNA polymerase, ...
著者Sheriff, S.
登録日2013-11-14
公開日2014-03-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Discovery and Preclinical Characterization of the Cyclopropylindolobenzazepine BMS-791325, A Potent Allosteric Inhibitor of the Hepatitis C Virus NS5B Polymerase.
J.Med.Chem., 57, 2014
7DF6
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BU of 7df6 by Molmil
Mouse Galectin-3 CRD in complex with novel tetrahydropyran-based thiodisaccharide mimic inhibitor
分子名称: (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-5-methoxy-6-[(3R,4R,5S)-4-oxidanyl-5-(4-pyrimidin-5-yl-1,2,3-triazol-1-yl)oxan-3-yl]sulfanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-ol, Galectin-3
著者Ghosh, K, Kumar, A.
登録日2020-11-06
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis, Structure-Activity Relationships, and In Vivo Evaluation of Novel Tetrahydropyran-Based Thiodisaccharide Mimics as Galectin-3 Inhibitors.
J.Med.Chem., 64, 2021
7DF5
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BU of 7df5 by Molmil
Human Galectin-3 CRD in complex with novel tetrahydropyran-based thiodisaccharide mimic inhibitor
分子名称: (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-5-methoxy-6-[(3R,4R,5S)-4-oxidanyl-5-(4-pyrimidin-5-yl-1,2,3-triazol-1-yl)oxan-3-yl]sulfanyl-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-ol, CHLORIDE ION, Galectin-3, ...
著者Ghosh, K, Kumar, A.
登録日2020-11-06
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Synthesis, Structure-Activity Relationships, and In Vivo Evaluation of Novel Tetrahydropyran-Based Thiodisaccharide Mimics as Galectin-3 Inhibitors.
J.Med.Chem., 64, 2021
7ELR
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BU of 7elr by Molmil
Crystal structure of xanthine riboswitch with xanthine
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NMT1 (46-MER), ...
著者Xu, X.C, Ren, A.M.
登録日2021-04-12
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021

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