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Crystal structure of human Fab PGT122, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor:	GLYCEROL, PGT122 heavy chain, PGT122 light chain
Authors:	Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:	2013-03-29
Release date:	2013-05-08
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans. Plos Pathog., 9, 2013

4JY4

Crystal structure of human Fab PGT121, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor:	GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PGT121 heavy chain, ...
Authors:	Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:	2013-03-29
Release date:	2013-05-15
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans. Plos Pathog., 9, 2013

5BZD

Crystal Structure of PCDN-27A, an antibody from the PCDN family of HIV-1 antibodies
Descriptor:	5G8 HIV Antibody heavy chain, 5G8 HIV Antibody light chain, GLYCEROL
Authors:	Garces, F, WILSON, I.A.
Deposit date:	2015-06-11
Release date:	2016-05-25
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Early Antibody Lineage Diversification and Independent Limb Maturation Lead to Broad HIV-1 Neutralization Targeting the Env High-Mannose Patch Immunity, 44, 2016

5BZW

Crystal Structure of PCDN-27B, an antibody from the PCDN family of HIV-1 antibodies
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2B3 HIV Antibody heavy chain, 2B3 HIV Antibody light chain, ...
Authors:	Garces, F, WILSON, I.A.
Deposit date:	2015-06-11
Release date:	2016-05-25
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Early Antibody Lineage Diversification and Independent Limb Maturation Lead to Broad HIV-1 Neutralization Targeting the Env High-Mannose Patch. Immunity, 44, 2016

4NPY

Crystal structure of germline Fab PGT121, a putative precursor of the broadly reactive and potent HIV-1 neutralizing antibody
Descriptor:	GLYCEROL, germline PGT121 heavy chain, germline PGT121 light chain
Authors:	Julien, J.-P, Diwanji, D.C, Wilson, I.A.
Deposit date:	2013-11-22
Release date:	2013-12-11
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.796 Å)
Cite:	The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies. Plos Pathog., 9, 2013

6SSL

Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule
Descriptor:	Endogenous retrovirus group K member 24 Gag polyprotein
Authors:	Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:	2019-09-08
Release date:	2020-01-01
Last modified:	2020-03-11
Method:	ELECTRON MICROSCOPY (3.77 Å)
Cite:	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid. Nat Commun, 10, 2019

6SA9

Endogenous Retrovirus HML2 Capsid NTD
Descriptor:	Endogenous retrovirus group K member 9 Pol protein, GLYCEROL
Authors:	Goldstone, D.C, Ball, N.J, Taylor, I.A.
Deposit date:	2019-07-16
Release date:	2020-01-01
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid. Nat Commun, 10, 2019

6SSJ

Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron
Descriptor:	Endogenous retrovirus group K member 24 Gag polyprotein
Authors:	Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:	2019-09-08
Release date:	2020-01-01
Last modified:	2024-05-22
Method:	ELECTRON MICROSCOPY (2.75 Å)
Cite:	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid. Nat Commun, 10, 2019

6SSM

Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron
Descriptor:	Endogenous retrovirus group K member 24 Gag polyprotein
Authors:	Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:	2019-09-08
Release date:	2020-01-01
Method:	ELECTRON MICROSCOPY (4.34 Å)
Cite:	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid. Nat Commun, 10, 2019

6SSK

Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Descriptor:	Endogenous retrovirus group K member 24 Gag polyprotein
Authors:	Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:	2019-09-08
Release date:	2020-01-01
Method:	ELECTRON MICROSCOPY (3.18 Å)
Cite:	Structural basis for Fullerene geometry in a human endogenous retrovirus capsid. Nat Commun, 10, 2019

6C59

Chimeric Pol kappa RIR Rev1 C-terminal domain
Descriptor:	ACETATE ION, Chimeric Pol kappa RIR Rev1 C-terminal domain
Authors:	Wojtaszek, J.L, Zhou, P.
Deposit date:	2018-01-15
Release date:	2019-06-12
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (2.03 Å)
Cite:	A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy. Cell, 178, 2019

6C8C

Chimeric Pol kappa RIR Rev1 C-terminal domain in complex with JHRE06
Descriptor:	8-chloro-2-[(2,4-dichlorophenyl)amino]-3-(3-methylbutanoyl)-5-nitroquinolin-4(1H)-one, Chimeric protein of the Pol Kappa RIR helix and the Rev1 C-terminal domain
Authors:	Najeeb, J, Zhou, P.
Deposit date:	2018-01-24
Release date:	2019-06-12
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy. Cell, 178, 2019

5JYX

Crystal structure of the covalent thioimide intermediate of the archaeosine synthase QueF-Like
Descriptor:	2-amino-5-[(Z)-iminomethyl]-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, Archeaosine synthase QueF-Like, SODIUM ION
Authors:	Mei, X, Swairjo, M.A.
Deposit date:	2016-05-15
Release date:	2016-11-09
Last modified:	2020-01-29
Method:	X-RAY DIFFRACTION (2.74 Å)
Cite:	Crystal structure of the archaeosine synthase QueF-like-Insights into amidino transfer and tRNA recognition by the tunnel fold. Proteins, 85, 2017

5K0P

Crystal structure of the archaeosine synthase QueF-Like in the apo form
Descriptor:	Archeaosine synthase QueF-Like, TETRAETHYLENE GLYCOL, THIOCYANATE ION, ...
Authors:	Mei, X, Swairjo, M.A.
Deposit date:	2016-05-17
Release date:	2016-11-09
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.94 Å)
Cite:	Crystal structure of the archaeosine synthase QueF-like-Insights into amidino transfer and tRNA recognition by the tunnel fold. Proteins, 85, 2017

1INN

CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, P21
Descriptor:	AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:	Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:	2001-05-14
Release date:	2001-06-08
Last modified:	2017-10-04
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs. Structure, 9, 2001

1J6X

CRYSTAL STRUCTURE OF HELICOBACTER PYLORI LUXS
Descriptor:	AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:	Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:	2001-05-14
Release date:	2001-06-08
Last modified:	2017-10-04
Method:	X-RAY DIFFRACTION (2.38 Å)
Cite:	A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs. Structure, 9, 2001

1J6V

CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, C2
Descriptor:	AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, ZINC ION
Authors:	Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:	2001-05-14
Release date:	2001-06-08
Last modified:	2017-10-04
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs. Structure, 9, 2001

1J6W

CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE LUXS
Descriptor:	AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:	Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:	2001-05-14
Release date:	2001-06-08
Last modified:	2017-10-04
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs. Structure, 9, 2001

4AQP

The structure of the AXH domain of ataxin-1.
Descriptor:	ATAXIN-1, DI(HYDROXYETHYL)ETHER, SODIUM ION
Authors:	Rees, M, Chen, Y.W, de Chiara, C, Pastore, A.
Deposit date:	2012-04-19
Release date:	2013-03-27
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (2.452 Å)
Cite:	Self-Assembly and Conformational Heterogeneity of the Axh Domain of Ataxin-1: An Unusual Example of a Chameleon Fold Biophys.J., 104, 2013

4APT

The structure of the AXH domain of ataxin-1.
Descriptor:	ATAXIN-1, SODIUM ION
Authors:	Rees, M, Chen, Y.W, de Chiara, C, Pastore, A.
Deposit date:	2012-04-05
Release date:	2013-03-27
Last modified:	2023-12-20
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Self-Assembly and Conformational Heterogeneity of the Axh Domain of Ataxin-1: An Unusual Example of a Chameleon Fold Biophys.J., 104, 2013

1VGU

Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Descriptor:	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Authors:	Structural GenomiX
Deposit date:	2003-11-03
Release date:	2003-11-25
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005

1VH0

Crystal structure of a hypothetical protein
Descriptor:	Hypothetical UPF0247 protein SAV0024/SA0023
Authors:	Structural GenomiX
Deposit date:	2003-11-03
Release date:	2003-11-25
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.31 Å)
Cite:	Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005

1VHL

Crystal structure of dephospho-CoA kinase with adenosine-5'-diphosphate
Descriptor:	ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, Dephospho-CoA kinase
Authors:	Structural GenomiX
Deposit date:	2003-12-01
Release date:	2003-12-30
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005

1VI1

Crystal structure of a fatty acid/phospholipid synthesis protein
Descriptor:	Fatty acid/phospholipid synthesis protein plsX
Authors:	Structural GenomiX
Deposit date:	2003-12-01
Release date:	2003-12-30
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.95 Å)
Cite:	Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005

1VGY

Crystal structure of succinyl diaminopimelate desuccinylase
Descriptor:	succinyl-diaminopimelate desuccinylase
Authors:	Structural GenomiX
Deposit date:	2003-11-03
Release date:	2003-11-25
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005

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