Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4GS1
DownloadVisualize
BU of 4gs1 by Molmil
Crystal structure of DyP-type peroxidase from Thermobifida cellulosilytica
分子名称: DyP-type peroxidase, GLYCEROL, OXYGEN MOLECULE, ...
著者Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
登録日2012-08-27
公開日2013-09-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
5W8G
DownloadVisualize
BU of 5w8g by Molmil
The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with SAH
分子名称: Autoinducer synthase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5W8E
DownloadVisualize
BU of 5w8e by Molmil
The structure of a CoA-dependent acyl-homoserine lactone synthase, BjaI, with the adduct of SAH and IV-CoA
分子名称: (2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-[(3-methylbutanoyl)amino]butanoic acid, ADENINE, Autoinducer synthase, ...
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WA3
DownloadVisualize
BU of 5wa3 by Molmil
Pyridine synthase, TbtD, from thiomuracin biosynthesis
分子名称: Pyridine synthase TbtD
著者Cogan, D.P, Nair, S.K.
登録日2017-06-24
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6C0H
DownloadVisualize
BU of 6c0h by Molmil
Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to 1-Dha6Ala
分子名称: GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2017-12-31
公開日2018-09-05
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C0G
DownloadVisualize
BU of 6c0g by Molmil
Lysinoalanine synthase, DurN, from duramycin biosynthesis
分子名称: Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2017-12-31
公開日2018-09-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.145 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C28
DownloadVisualize
BU of 6c28 by Molmil
Transcriptional repressor, CouR, bound to p-coumaroyl-CoA
分子名称: Transcriptional regulator, MarR family, p-coumaroyl-CoA
著者Cogan, D.P, Nair, S.K.
登録日2018-01-07
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
6C8S
DownloadVisualize
BU of 6c8s by Molmil
Loganic acid methyltransferase with SAH
分子名称: Loganic acid O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Petronikolou, N, Nair, S.K.
登録日2018-01-25
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Loganic Acid Methyltransferase: Insights into the Specificity of Methylation on an Iridoid Glycoside.
Chembiochem, 19, 2018
6C0Y
DownloadVisualize
BU of 6c0y by Molmil
Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin
分子名称: CYS-LYS-GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY-ASN-DBB-LYS, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2018-01-03
公開日2018-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C9T
DownloadVisualize
BU of 6c9t by Molmil
Transcriptional repressor, CouR
分子名称: CouR
著者Cogan, D.P, Nair, S.K.
登録日2018-01-28
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
4IIY
DownloadVisualize
BU of 4iiy by Molmil
Structure of MccF in complex with glutamyl sulfamoyl inosine
分子名称: 1,2-ETHANEDIOL, 5'-O-(L-alpha-glutamylsulfamoyl)inosine, MccF
著者Agarwal, V, Nair, S.K.
登録日2012-12-20
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of MccF with substrate analogs
To be Published
4IM7
DownloadVisualize
BU of 4im7 by Molmil
Crystal structure of fructuronate reductase (ydfI) from E. coli CFT073 (EFI TARGET EFI-506389) complexed with NADH and D-mannonate
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-MANNONIC ACID, Hypothetical oxidoreductase ydfI, ...
著者Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
登録日2013-01-02
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of fructuronate reductase (ydfI) from E. coli CFT073 (EFI TARGET EFI-506389) complexed with NADH and D-mannonate
To be Published
4IL2
DownloadVisualize
BU of 4il2 by Molmil
Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)
分子名称: MAGNESIUM ION, Starvation sensing protein rspA
著者Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
登録日2012-12-28
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mannonate degradation pathway in E. coli CFT073
To be Published
4IIX
DownloadVisualize
BU of 4iix by Molmil
Structure of MccF in complex with glutamyl sulfamoyl guanosine
分子名称: 1,2-ETHANEDIOL, 5'-O-(L-alpha-glutamylsulfamoyl)guanosine, MccF
著者Agarwal, V, Nair, S.K.
登録日2012-12-20
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.229 Å)
主引用文献Structure of MccF with substrate analogs
To be Published
4INE
DownloadVisualize
BU of 4ine by Molmil
Crystal structure of N-methyl transferase (PMT-2) from Caenorhabditis elegant complexed with S-adenosyl homocysteine and phosphoethanolamine
分子名称: BETA-MERCAPTOETHANOL, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Protein PMT-2, ...
著者Lukk, T, Nair, S.K.
登録日2013-01-04
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of N-methyl transferase (PMT-2) from Caenorhabditis elegant complexed with S-adenosyl homocysteine and phosphoethanolamine
To be Published
4ILK
DownloadVisualize
BU of 4ilk by Molmil
Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MANGANESE (II) ION, Starvation sensing protein rspB, ...
著者Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
登録日2012-12-31
公開日2013-01-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
To be Published
4IL0
DownloadVisualize
BU of 4il0 by Molmil
Crystal structure of GlucDRP from E. coli K-12 MG1655 (EFI target EFI-506058)
分子名称: CITRIC ACID, GLYCEROL, Glucarate dehydratase-related protein
著者Lukk, T, Ghasempur, S, Imker, H.J, Gerlt, J.A, Nair, S.K, Enzyme Function Initiative (EFI)
登録日2012-12-28
公開日2013-01-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Glucarate dehydratase and its related protein from Escherichia coli form a heterotetrameric complex.
to be published
4IV8
DownloadVisualize
BU of 4iv8 by Molmil
Crystal structure of N-methyl transferase from Plasmodium knowlesi complexed with S-adenosyl methionine
分子名称: BETA-MERCAPTOETHANOL, Phosphoethanolamine N-methyltransferase,putative, S-ADENOSYLMETHIONINE
著者Lukk, T, Nair, S.K.
登録日2013-01-22
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Phosphoethanolamine N-methyl transferase is a Malarial drug target.
To be Published
4IV0
DownloadVisualize
BU of 4iv0 by Molmil
Crystal structure of N-methyl transferase from Plasmodium vivax complexed with S-adenosyl methionine and phosphate
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, PHOSPHATE ION, ...
著者Lukk, T, Nair, S.K.
登録日2013-01-22
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Phosphoethanolamine N-methyl transferase is a Malarial drug target
To be Published
4K8G
DownloadVisualize
BU of 4k8g by Molmil
Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
著者Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K.
登録日2013-04-18
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
To be Published
4KWC
DownloadVisualize
BU of 4kwc by Molmil
Structure of the plantazolicin methyltransferase BpumL in complex with SAH
分子名称: BpumL, S-ADENOSYL-L-HOMOCYSTEINE
著者Hao, Y, Nair, S.K.
登録日2013-05-23
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KVZ
DownloadVisualize
BU of 4kvz by Molmil
Crystal structure of the plantazolicin methyltransferase BamL in complex with SAH
分子名称: BamL, S-ADENOSYL-L-HOMOCYSTEINE
著者Hao, Y, Nair, S.K.
登録日2013-05-23
公開日2013-07-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4MGS
DownloadVisualize
BU of 4mgs by Molmil
BiXyn10A CBM1 APO
分子名称: Putative glycosyl hydrolase family 10
著者Chekan, J.R, Nair, S.K.
登録日2013-08-28
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MGQ
DownloadVisualize
BU of 4mgq by Molmil
PbXyn10C CBM APO
分子名称: CALCIUM ION, Glycosyl hydrolase family 10
著者Chekan, J.R, Nair, S.K.
登録日2013-08-28
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
3OEB
DownloadVisualize
BU of 3oeb by Molmil
Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose
分子名称: CALCIUM ION, S-layer associated multidomain endoglucanase, SULFATE ION, ...
著者Agarwal, V, Nair, S.K.
登録日2010-08-12
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon