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2Z3I
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BU of 2z3i by Molmil
Crystal structure of blasticidin S deaminase (BSD) mutant E56Q complexed with substrate
分子名称: BLASTICIDIN S, Blasticidin-S deaminase, CACODYLATE ION, ...
著者Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc
J.Biol.Chem., 282, 2007
2Z3J
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BU of 2z3j by Molmil
Crystal structure of blasticidin S deaminase (BSD) R90K mutant
分子名称: Blasticidin-S deaminase, CACODYLATE ION, CHLORIDE ION, ...
著者Teh, A.H, Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T.
登録日2007-06-04
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc
J.Biol.Chem., 282, 2007
1UAX
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BU of 1uax by Molmil
Crystal structure of the ribonuclease H2 from Pyrococcus horikoshii OT3
分子名称: Ribonuclease HII
著者Hata, T, Numata, T, Kakuta, Y, Kimura, M.
登録日2003-03-24
公開日2004-06-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the ribonuclease H2 from Pyrococcus horikoshii OT3
To be published
1V76
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Crystal Structure of Archaeal Ribonuclease P Protein Ph1771p from Pyrococcus horikoshii OT3
分子名称: RNase P protein Ph1771p, SULFATE ION
著者Numata, T, Kakuta, Y, Kimura, M.
登録日2003-12-12
公開日2004-10-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp29
Rna, 10, 2004
2ZAE
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BU of 2zae by Molmil
Crystal structure of protein Ph1601p in complex with protein Ph1771p of archaeal ribonuclease P from Pyrococcus horikoshii OT3
分子名称: GLYCEROL, NITRATE ION, Ribonuclease P protein component 1, ...
著者Honda, T, Kakuta, Y, Kimura, M.
登録日2007-10-04
公開日2008-10-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure of an archaeal homolog of the human protein complex Rpp21-Rpp29 that is a key core component for the assembly of active ribonuclease P.
J.Mol.Biol., 384, 2008
1IYB
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BU of 1iyb by Molmil
Crystal Structure of the Nicotiana glutinosa Ribonuclease NW
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Ribonuclease
著者Kawano, S, Kakuta, Y, Kimura, M.
登録日2002-08-05
公開日2003-08-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Guanine binding site of the Nicotiana glutinosa ribonuclease NW revealed by X-ray crystallography
Biochemistry, 41, 2002
3VSM
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BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
3VSN
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BU of 3vsn by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
分子名称: GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66
著者Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
2ZWI
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Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, Photobacterium phosphoreum
分子名称: Alpha-/beta-galactoside alpha-2,3-sialyltransferase, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Iwatani, T, Okino, N, Sakakura, M, Kajiwara, H, Ichikawa, M, Takakura, Y, Kimura, M, Ito, M, Yamamoto, T, Kakuta, Y.
登録日2008-12-05
公開日2009-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of alpha/beta-galactoside alpha2,3-sialyltransferase from a luminous marine bacterium, Photobacterium phosphoreum
Febs Lett., 583, 2009
3AP3
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Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Protein-tyrosine sulfotransferase 2
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013
3AP1
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Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP and C4 peptide
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ...
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013
3AP2
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Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP,C4 peptide, and phosphate ion
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ...
著者Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2: Insights into substrate-binding and catalysis of post-translational protein tyrosine sulfation
To be Published
2ZOX
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Crystal Structure of the Covalent Intermediate of Human Cytosolic beta-Glucosidase
分子名称: 4-nitrophenyl alpha-D-glucopyranoside, Cytosolic beta-glucosidase, GLYCEROL, ...
著者Noguchi, J, Hayashi, Y, Baba, Y, Okino, N, Kimura, M, Ito, M, Kakuta, Y.
登録日2008-06-17
公開日2008-09-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the covalent intermediate of human cytosolic beta-glucosidase
Biochem.Biophys.Res.Commun., 374, 2008
2ZVQ
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BU of 2zvq by Molmil
Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and alpha-naphthol
分子名称: 1-NAPHTHOL, ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-11-14
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase--mSULT1D1
Biochem.Biophys.Res.Commun., 379, 2009
2ZVP
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Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-11-14
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase--mSULT1D1
Biochem.Biophys.Res.Commun., 379, 2009
2ZYU
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Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS and p-nitrophenyl sulfate
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, 4-nitrophenyl sulfate, GLYCEROL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
2ZYV
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Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS/PAP and p-nitrophenol
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
5XTM
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BU of 5xtm by Molmil
Crystal structure of PhoRpp38 bound to a K-turn in P12.2 helix
分子名称: 50S ribosomal protein L7Ae, MAGNESIUM ION, RNA (47-MER)
著者Oshima, K, Kimura, M.
登録日2017-06-20
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif.
Acta Crystallogr F Struct Biol Commun, 74, 2018
2ZYW
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BU of 2zyw by Molmil
crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol, obtained by two-step soaking method
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, P-NITROPHENOL, ...
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
2ZYT
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Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, GLYCEROL, Tyrosine-ester sulfotransferase
著者Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2009-01-29
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate
Biochem.Biophys.Res.Commun., 383, 2009
5Y7M
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Crystal structure of PhoRpp38 bound to a K-turn in P12.1 helix
分子名称: 50S ribosomal protein L7Ae, GUANOSINE-5'-TRIPHOSPHATE, RNA (52-MER), ...
著者Oshima, K, Kimura, M.
登録日2017-08-01
公開日2018-02-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif.
Acta Crystallogr F Struct Biol Commun, 74, 2018
2ZPT
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Crystal structure of mouse sulfotransferase SULT1D1 complex with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, Tyrosine-ester sulfotransferase
著者Teramoto, T, Sakakibara, Y, Inada, K, Liu, M.C, Suiko, M, Kimura, M, Kakuta, Y.
登録日2008-07-28
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structure of mSULT1D1, a mouse catecholamine sulfotransferase
Febs Lett., 582, 2008
3A5T
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Crystal structure of MafG-DNA complex
分子名称: 5'-D(*CP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*G)-3', MAGNESIUM ION, ...
著者Kurokawa, H, Motohashi, H, Sueno, S, Kimura, M, Takagawa, H, Kanno, Y, Yamamoto, M, Tanaka, T.
登録日2009-08-11
公開日2009-10-13
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of Alternative DNA Recognition by Maf Transcription Factors
Mol.Cell.Biol., 29, 2009
2Z41
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Crystal Structure Analysis of the Ski2-type RNA helicase
分子名称: MAGNESIUM ION, putative ski2-type helicase
著者Nakashima, T, Zhang, X, Kakuta, Y, Yao, M, Tanaka, I, Kimura, M.
登録日2007-06-12
公開日2008-04-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Crystal structure of an archaeal Ski2p-like protein from Pyrococcus horikoshii OT3
Protein Sci., 17, 2008
3VK9
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Crystal structure of delta-class glutathione transferase from silkmoth
分子名称: GLYCEROL, Glutathione S-transferase delta
著者Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K.
登録日2011-11-10
公開日2012-10-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012

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