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6LVR
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BU of 6lvr by Molmil
Crystal structure of the PPR domain of Arabidopsis thaliana protein-only RNase P 1 (PRORP1) in complex with tRNA
分子名称: Proteinaceous RNase P 1, chloroplastic/mitochondrial, yeast phenylalanine tRNA
著者Teramoto, T, Hall, T.M.T.
登録日2020-02-04
公開日2020-08-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA.
Nucleic Acids Res., 48, 2020
7LWZ
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BU of 7lwz by Molmil
Apo Structure of Vibrio cholerae dGTPase protein VC1979
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1, NICKEL (II) ION
著者Sikkema, A.P, Horng, J, Klemm, B.P, Schaaper, R.M, Hall, T.M.T.
登録日2021-03-02
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structure of Vibrio cholerae dGTPase protein VC1979
To Be Published
1RPU
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BU of 1rpu by Molmil
Crystal Structure of CIRV p19 bound to siRNA
分子名称: 19 kDa protein, 5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*UP*CP*AP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3'
著者Vargason, J.M, Szittya, G, Burgyan, J, Hall, T.M.T.
登録日2003-12-03
公開日2004-01-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Size selective recognition of siRNA by an RNA silencing suppressor
Cell(Cambridge,Mass.), 115, 2003
8SCH
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BU of 8sch by Molmil
TCEI_III NMR Structure
分子名称: RNA (68-MER)
著者Warden, M.S, Mueller, G.A, Hall, T.M.T.
登録日2023-04-05
公開日2023-07-12
最終更新日2023-09-20
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献The translational repressor Glorund uses interchangeable RNA recognition domains to recognize Drosophila nanos.
Nucleic Acids Res., 51, 2023
8SCF
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BU of 8scf by Molmil
TCEIII NMR Structure
分子名称: RNA (30-MER)
著者Warden, M.S, Mueller, G.A, Hall, T.M.T.
登録日2023-04-05
公開日2023-07-12
最終更新日2023-09-20
実験手法SOLUTION NMR
主引用文献The translational repressor Glorund uses interchangeable RNA recognition domains to recognize Drosophila nanos.
Nucleic Acids Res., 51, 2023
8SJ7
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BU of 8sj7 by Molmil
Crystal structure of FBF-2 (RBD+CT) in complex with compact FBE RNA
分子名称: Fem-3 mRNA-binding factor 2, RNA (5'-R(*CP*UP*GP*UP*GP*AP*AP*UP*G)-3')
著者Qiu, C, Hall, T.M.T.
登録日2023-04-17
公開日2023-09-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Intra- and inter-molecular regulation by intrinsically-disordered regions governs PUF protein RNA binding.
Nat Commun, 14, 2023
1M8W
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BU of 1m8w by Molmil
CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE1-19 RNA
分子名称: 5'-R(P*UP*GP*UP*AP*UP*AP*U)-3', 5'-R(P*UP*GP*UP*CP*CP*AP*G)-3', 5'-R(P*UP*UP*GP*UP*AP*UP*AP*U)-3', ...
著者Wang, X, McLachlan, J, Zamore, P.D, Hall, T.M.T.
登録日2002-07-26
公開日2002-09-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献MODULAR RECOGNITION OF RNA BY A HUMAN PUMILIO-HOMOLOGY DOMAIN
CELL(CAMBRIDGE,MASS.), 110, 2002
1M8Y
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BU of 1m8y by Molmil
CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE2-10 RNA
分子名称: 5'-R(P*AP*UP*UP*GP*UP*AP*CP*AP*UP*A)-3', Pumilio 1
著者Wang, X, McLachlan, J, Zamore, P.D, Hall, T.M.T.
登録日2002-07-26
公開日2002-09-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献MODULAR RECOGNITION OF RNA BY A HUMAN PUMILIO-HOMOLOGY DOMAIN
CELL(CAMBRIDGE,MASS.), 110, 2002
1M8X
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BU of 1m8x by Molmil
CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE1-14 RNA
分子名称: 5'-R(P*UP*GP*UP*AP*UP*AP*U)-3', 5'-R(P*UP*UP*GP*UP*AP*UP*AP*U)-3', Pumilio 1
著者Wang, X, McLachlan, J, Zamore, P.D, Hall, T.M.T.
登録日2002-07-26
公開日2002-09-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献MODULAR RECOGNITION OF RNA BY A HUMAN PUMILIO-HOMOLOGY DOMAIN
CELL(CAMBRIDGE,MASS.), 110, 2002
6PUN
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BU of 6pun by Molmil
Crystal structure of a ternary complex of FBF-2 with LST-1 (site B) and compact FBE RNA
分子名称: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, GLYCEROL, ...
著者Qiu, C, Campbell, Z.T, Hall, T.M.T.
登録日2019-07-18
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity.
Elife, 8, 2019
7S02
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BU of 7s02 by Molmil
Crystal structure of FBF-2 in complex with LST-1 site A peptide and FBE RNA
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FBE RNA, ...
著者Qiu, C, Hall, T.M.T.
登録日2021-08-28
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Bipartite interaction sites differentially modulate RNA-binding affinity of a protein complex essential for germline stem cell self-renewal.
Nucleic Acids Res., 50, 2022
7RZZ
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BU of 7rzz by Molmil
Crystal structure of FBF-2 in complex with LST-1 site A peptide and compact FBE RNA
分子名称: Fem-3 mRNA-binding factor 2, Lateral Signaling Target, RNA
著者Qiu, C, Hall, T.M.T.
登録日2021-08-28
公開日2022-04-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Bipartite interaction sites differentially modulate RNA-binding affinity of a protein complex essential for germline stem cell self-renewal.
Nucleic Acids Res., 50, 2022
3BX2
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BU of 3bx2 by Molmil
Puf4 RNA binding domain bound to HO endonuclease RNA 3' UTR recognition sequence
分子名称: HO endonuclease 3' UTR binding sequence, Protein PUF4, SODIUM ION, ...
著者Miller, M.T, Higgin, J.J, Hall, T.M.T.
登録日2008-01-11
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
3BX3
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BU of 3bx3 by Molmil
Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence
分子名称: COX17 RNA target sequence, Protein PUF4, SULFATE ION
著者Miller, M.T, Higgin, J.J, Hall, T.M.T.
登録日2008-01-11
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
3BWT
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BU of 3bwt by Molmil
Crystal structure of the RNA binding domain of Puf4 from Saccharomyces cerevisiae
分子名称: Protein PUF4
著者Miller, M.T, Higgin, J.J, Hall, T.M.T.
登録日2008-01-10
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
1M8Z
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BU of 1m8z by Molmil
Crystal Structure Of A Pumilio-Homology Domain
分子名称: BETA-MERCAPTOETHANOL, PUMILIO 1
著者Wang, X, Zamore, P.D, Hall, T.M.T.
登録日2002-07-26
公開日2002-09-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Pumilio homology domain.
Mol.Cell, 7, 2001
7TU3
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BU of 7tu3 by Molmil
Structure of the L. blandensis dGTPase del55-58 mutant
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, SULFATE ION, ...
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU2
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BU of 7tu2 by Molmil
Structure of the L. blandensis dGTPase R37A mutant bound to Mn
分子名称: MANGANESE (II) ION, SULFATE ION, dGTP triphosphohydrolase
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU1
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BU of 7tu1 by Molmil
Structure of the L. blandensis dGTPase R37A mutant
分子名称: 1,2-ETHANEDIOL, SULFATE ION, dGTP triphosphohydrolase
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU0
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BU of 7tu0 by Molmil
Structure of the L. blandensis dGTPase bound to Mn
分子名称: MANGANESE (II) ION, SULFATE ION, dGTP triphosphohydrolase
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU4
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BU of 7tu4 by Molmil
Structure of the L. blandensis dGTPase del55-58 mutant bound to Mn
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, SULFATE ION, ...
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
6NWW
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BU of 6nww by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P212121 space group
分子名称: CHLORIDE ION, Pumilio domain-containing protein C56F2.08c
著者Qiu, C, Hall, T.M.T.
登録日2019-02-07
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NX5
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BU of 6nx5 by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P21 space group
分子名称: 1,2-ETHANEDIOL, Pumilio domain-containing protein C56F2.08c
著者Qiu, C, Hall, T.M.T.
登録日2019-02-08
公開日2019-07-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.554 Å)
主引用文献Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NY5
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BU of 6ny5 by Molmil
Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA
分子名称: MAGNESIUM ION, Pumilio domain-containing protein C56F2.08c, RNA (5'-R(P*UP*UP*AP*AP*UP*AP*AP*CP*UP*UP*AP*AP*U)-3'), ...
著者Qiu, C, Hall, T.M.T.
登録日2019-02-11
公開日2019-07-03
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
3V71
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BU of 3v71 by Molmil
Crystal structure of PUF-6 in complex with 5BE13 RNA
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Puf (Pumilio/fbf) domain-containing protein 7, confirmed by transcript evidence, ...
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012

 

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