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4UX1
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Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
1OED
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BU of 1oed by Molmil
STRUCTURE OF ACETYLCHOLINE RECEPTOR PORE FROM ELECTRON IMAGES
分子名称: Acetylcholine receptor beta subunit, Acetylcholine receptor delta subunit, Acetylcholine receptor gamma subunit, ...
著者Miyazawa, A, Fujiyoshi, Y, Unwin, N.
登録日2003-03-24
公開日2003-06-26
最終更新日2019-09-11
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure and gating mechanism of the acetylcholine receptor pore.
Nature, 423, 2003
4UX2
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Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. MgF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (7 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
1AT9
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BU of 1at9 by Molmil
STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY
分子名称: BACTERIORHODOPSIN, RETINAL
著者Kimura, Y, Vassylyev, D.G, Miyazawa, A, Kidera, A, Matsushima, M, Mitsuoka, K, Murata, K, Hirai, T, Fujiyoshi, Y.
登録日1997-08-20
公開日1998-09-16
最終更新日2011-07-13
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献Surface of bacteriorhodopsin revealed by high-resolution electron crystallography.
Nature, 389, 1997
4BGN
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cryo-EM structure of the NavCt voltage-gated sodium channel
分子名称: VOLTAGE-GATED SODIUM CHANNEL
著者Tsai, C.J, Tani, K, Irie, K, Hiroaki, Y, Shimomura, T, Mcmillan, D.G, Cook, G.M, Schertler, G, Fujiyoshi, Y, Li, X.D.
登録日2013-03-28
公開日2013-07-10
最終更新日2023-12-20
実験手法ELECTRON CRYSTALLOGRAPHY (9 Å)
主引用文献Two Alternative Conformations of a Voltage-Gated Sodium Channel.
J.Mol.Biol., 425, 2013
8GCL
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BU of 8gcl by Molmil
Cryo-EM structure of hAQP2 in DDM
分子名称: Aquaporin-2
著者Kamegawa, A, Suzuki, S, Nishikawa, K, Numoto, N, Suzuki, H, Fujiyoshi, Y.
登録日2023-03-02
公開日2023-06-21
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural analysis of the water channel AQP2 by single-particle cryo-EM.
J.Struct.Biol., 215, 2023
4P79
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Crystal structure of mouse claudin-15
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Claudin-15
著者Suzuki, H, Nishizawa, T, Tani, K, Yamazaki, Y, Tamura, A, Ishitani, R, Dohmae, N, Tsukita, S, Nureki, O, Fujiyoshi, Y.
登録日2014-03-26
公開日2014-04-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a claudin provides insight into the architecture of tight junctions.
Science, 344, 2014
1FQY
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STRUCTURE OF AQUAPORIN-1 AT 3.8 A RESOLUTION BY ELECTRON CRYSTALLOGRAPHY
分子名称: AQUAPORIN-1
著者Murata, K, Mitsuoka, K, Hirai, T, Walz, T, Agre, P, Heymann, J.B, Engel, A, Fujiyoshi, Y.
登録日2000-09-07
公開日2000-10-18
最終更新日2024-04-17
実験手法ELECTRON CRYSTALLOGRAPHY (3.8 Å)
主引用文献Structural determinants of water permeation through aquaporin-1.
Nature, 407, 2000
1L9H
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Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEPTANE-1,2,3-TRIOL, MERCURY (II) ION, ...
著者Okada, T, Fujiyoshi, Y, Silow, M, Navarro, J, Landau, E.M, Shichida, Y.
登録日2002-03-23
公開日2002-05-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 99, 2002
3IYZ
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Structure of Aquaporin-4 S180D mutant at 10.0 A resolution from electron micrograph
分子名称: Aquaporin-4
著者Mitsuma, T, Tani, K, Hiroaki, Y, Kamegawa, A, Suzuki, H, Hibino, H, Kurachi, Y, Fujiyoshi, Y.
登録日2010-07-24
公開日2010-08-25
最終更新日2023-09-06
実験手法ELECTRON CRYSTALLOGRAPHY (10 Å)
主引用文献Influence of the cytoplasmic domains of aquaporin-4 on water conduction and array formation.
J.Mol.Biol., 402, 2010
1I2H
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BU of 1i2h by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PSD-ZIP45(HOMER1C/VESL-1L)CONSERVED HOMER 1 DOMAIN
分子名称: PSD-ZIP45(HOMER-1C/VESL-1L)
著者Irie, K, Nakatsu, T, Mitsuoka, K, Fujiyoshi, Y, Kato, H.
登録日2001-02-09
公開日2002-05-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Homer 1 Family Conserved Region Reveals the Interaction Between the EVH1 Domain and Own Proline-rich Motif
J.Mol.Biol., 318, 2002
2AT9
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BU of 2at9 by Molmil
STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM BY ELECTRON CRYSTALLOGRAPHY
分子名称: 3-[[3-METHYLPHOSPHONO-GLYCEROLYL]PHOSPHONYL]-[1,2-DI[2,6,10,14-TETRAMETHYL-HEXADECAN-16-YL]GLYCEROL, BACTERIORHODOPSIN, RETINAL
著者Mitsuoka, K, Hirai, T, Murata, K, Miyazawa, A, Kidera, A, Kimura, Y, Fujiyoshi, Y.
登録日1998-12-17
公開日1999-04-27
最終更新日2011-07-13
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution.
J.Mol.Biol., 286, 1999
7WSV
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BU of 7wsv by Molmil
Cryo-EM structure of the N-terminal deletion mutant of human pannexin-1 in a nanodisc
分子名称: Pannexin-1
著者Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2022-02-01
公開日2022-02-16
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids.
Sci.Signal., 15, 2022
3IZ1
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BU of 3iz1 by Molmil
C-alpha model fitted into the EM structure of Cx26M34A
分子名称: Gap junction beta-2 protein
著者Oshima, A, Tani, K, Toloue, M.M, Hiroaki, Y, Smock, A, Inukai, S, Cone, A, Nicholson, B.J, Sosinsky, G.E, Fujiyoshi, Y.
登録日2010-08-19
公開日2010-11-03
最終更新日2024-02-21
実験手法ELECTRON CRYSTALLOGRAPHY (6 Å)
主引用文献Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels.
J.Mol.Biol., 405, 2011
3IZ2
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C-alpha model fitted into the EM structure of Cx26M34Adel2-7
分子名称: Gap junction beta-2 protein
著者Oshima, A, Tani, K, Toloue, M.M, Hiroaki, Y, Smock, A, Inukai, S, Cone, A, Nicholson, B.J, Sosinsky, G.E, Fujiyoshi, Y.
登録日2010-08-19
公開日2010-11-03
最終更新日2024-02-21
実験手法ELECTRON CRYSTALLOGRAPHY (10 Å)
主引用文献Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels.
J.Mol.Biol., 405, 2011
3X29
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CRYSTAL STRUCTURE of MOUSE CLAUDIN-19 IN COMPLEX with C-TERMINAL FRAGMENT OF CLOSTRIDIUM PERFRINGENS ENTEROTOXIN
分子名称: Claudin-19, Heat-labile enterotoxin B chain
著者Saitoh, Y, Suzuki, H, Tani, K, Nishikawa, K, Irie, K, Ogura, Y, Tamura, A, Tsukita, S, Fujiyoshi, Y.
登録日2014-12-13
公開日2015-01-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural insight into tight junction disassembly by Clostridium perfringens enterotoxin
Science, 347, 2015
2ZZ9
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Structure of aquaporin-4 S180D mutant at 2.8 A resolution by electron crystallography
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Aquaporin-4
著者Tani, K, Mitsuma, T, Hiroaki, Y, Kamegawa, A, Nishikawa, K, Tanimura, Y, Fujiyoshi, Y.
登録日2009-02-06
公開日2009-06-09
最終更新日2023-11-08
実験手法ELECTRON CRYSTALLOGRAPHY (2.8 Å)
主引用文献Mechanism of Aquaporin-4's Fast and Highly Selective Water Conduction and Proton Exclusion.
J.Mol.Biol., 389, 2009
3IXZ
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Pig gastric H+/K+-ATPase complexed with aluminium fluoride
分子名称: Potassium-transporting ATPase alpha, Potassium-transporting ATPase subunit beta
著者Abe, K, Tani, K, Nishizawa, T, Fujiyoshi, Y.
登録日2009-03-09
公開日2009-06-23
最終更新日2024-02-21
実験手法ELECTRON CRYSTALLOGRAPHY (6.5 Å)
主引用文献Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle
Embo J., 28, 2009
2B6O
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BU of 2b6o by Molmil
Electron crystallographic structure of lens Aquaporin-0 (AQP0) (lens MIP) at 1.9A resolution, in a closed pore state
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Lens fiber major intrinsic protein
著者Gonen, T, Cheng, Y, Sliz, P, Hiroaki, Y, Fujiyoshi, Y, Harrison, S.C, Walz, T.
登録日2005-10-03
公開日2005-12-06
最終更新日2023-08-23
実験手法ELECTRON CRYSTALLOGRAPHY (1.9 Å)
主引用文献Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.
Nature, 438, 2005
2B6P
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X-ray structure of lens Aquaporin-0 (AQP0) (lens MIP) in an open pore state
分子名称: Lens fiber major intrinsic protein
著者Gonen, T, Cheng, Y, Sliz, P, Hiroaki, Y, Fujiyoshi, Y, Harrison, S.C, Walz, T.
登録日2005-10-03
公開日2005-12-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.
Nature, 438, 2005
6AKF
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Crystal structure of mouse claudin-3 P134A mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
6AKG
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Crystal structure of mouse claudin-3 P134G mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
6AKE
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Crystal structure of mouse claudin-3 in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Claudin-3, Heat-labile enterotoxin B chain
著者Nakamura, S, Irie, K, Fujiyoshi, Y.
登録日2018-08-31
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Morphologic determinant of tight junctions revealed by claudin-3 structures.
Nat Commun, 10, 2019
5GLH
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Human endothelin receptor type-B in complex with ET-1
分子名称: Endothelin Receptor Subtype-B, Peptide from Endothelin-1
著者Shihoya, W, Nishizawa, T, Okuta, A, Tani, K, Fujiyoshi, Y, Dohmae, N, Nureki, O, Doi, T.
登録日2016-07-11
公開日2016-09-07
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Activation mechanism of endothelin ETB receptor by endothelin-1.
Nature, 537, 2016
5H1R
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C. elegans INX-6 gap junction channel
分子名称: Innexin-6
著者Oshima, A, Tani, K, Fujiyoshi, Y.
登録日2016-10-11
公開日2016-12-07
最終更新日2017-02-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016

 

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