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8A9E
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BU of 8a9e by Molmil
Lysozyme, 9-11 fs FEL pulses as determined by XTCAV
分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, GADOLINIUM ATOM, Lysozyme
著者Barends, T, Nass, K, Gorel, A, Schlichting, I.
登録日2022-06-28
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.665 Å)
主引用文献Microcrystallization methods
To Be Published
8A9F
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BU of 8a9f by Molmil
Thaumatin, 9-11 fs FEL pulses as determined by XTCAV
分子名称: L(+)-TARTARIC ACID, Thaumatin-1
著者Barends, T, Nass, K, Gorel, A, Schlichting, I.
登録日2022-06-28
公開日2023-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Microcrystallization paper
To Be Published
6FKW
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BU of 6fkw by Molmil
Europium-containing methanol dehydrogenase
分子名称: EUROPIUM ION, Methanol dehydrogenase, PYRROLOQUINOLINE QUINONE
著者Barends, T, Dietl, A.
登録日2018-01-24
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Similar but not the same: First Kinetic and Structural Analyses of a Methanol Dehydrogenase Containing a Europium Ion in the Active Site.
Chembiochem, 2018
5MXZ
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BU of 5mxz by Molmil
Kustc0563 Y40F mutant
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Cytochrome c-552 Ks_3358, ...
著者Mohd, A, Barends, T.
登録日2017-01-25
公開日2018-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Function of the c-type cytochrome Kustc0563 from Kuenenia stuttgartiensis
To Be Published
7ZS2
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BU of 7zs2 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292H mutant
分子名称: CALCIUM ION, HEME C, Hypothetical (Diheme) protein
著者Akram, M, Barends, T.
登録日2022-05-05
公開日2023-05-17
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
7ZS1
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BU of 7zs1 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292C mutant
分子名称: CALCIUM ION, GLYCEROL, HEME C, ...
著者Akram, M, Barends, T.
登録日2022-05-05
公開日2023-05-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
7ZS0
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BU of 7zs0 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis
分子名称: CALCIUM ION, GLYCEROL, HEME C, ...
著者Akram, M, Barends, T.
登録日2022-05-05
公開日2023-05-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
2RHG
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BU of 2rhg by Molmil
Tryptophan synthase complexed with IGP, pH 7.0, internal aldimine
分子名称: INDOLE-3-GLYCEROL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
著者Kulik, V, Barends, T, Schlichting, I.
登録日2007-10-09
公開日2007-11-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tryptophan synthase complexed with IGP, pH 7.0, internal aldimine
To be Published
7QV0
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BU of 7qv0 by Molmil
Covalent complex between Scalindua brodae amxFabZ and amxACP
分子名称: Acyl carrier protein, Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase, S-[2-[3-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (Z)-hex-2-enethioate
著者Barends, T, Dietl, A.
登録日2022-01-19
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structures of an unusual 3-hydroxyacyl dehydratase (FabZ) from a ladderane-producing organism with an unexpected substrate preference.
J.Biol.Chem., 299, 2023
3GFX
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BU of 3gfx by Molmil
Klebsiella pneumoniae BlrP1 pH 4.5 calcium/cy-diGMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
著者Barends, T, Hartmann, E, Griese, J, Beitlich, T, Kirienko, N, Ryjenkov, D, Reinstein, J, Shoeman, R, Gomelsky, M, Schlichting, I.
登録日2009-02-27
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.
Nature, 459, 2009
3GG1
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BU of 3gg1 by Molmil
Klebsiella pneumoniae BlrP1 pH 8.0 calcium/cy-diGMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
著者Barends, T, Hartmann, E, Griese, J, Beitlich, T, Kirienko, N, Ryjenkov, D, Reinstein, J, Shoeman, R, Gomelsky, M, Schlichting, I.
登録日2009-02-27
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.
Nature, 459, 2009
3GFZ
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BU of 3gfz by Molmil
Klebsiella pneumoniae BlrP1 pH 6 manganese/cy-diGMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FLAVIN MONONUCLEOTIDE, Klebsiella pneumoniae BlrP1, ...
著者Barends, T, Hartmann, E, Griese, J, Beitlich, T, Kirienko, N, Ryjenkov, D, Reinstein, J, Shoeman, R, Gomelsky, M, Schlichting, I.
登録日2009-02-27
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.
Nature, 459, 2009
3GG0
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BU of 3gg0 by Molmil
Klebsiella pneumoniae BlrP1 pH 9.0 manganese/cy-diGMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FLAVIN MONONUCLEOTIDE, Klebsiella pneumoniae BlrP1, ...
著者Barends, T, Hartmann, E, Griese, J, Beitlich, T, Kirienko, N, Ryjenkov, D, Reinstein, J, Shoeman, R, Gomelsky, M, Schlichting, I.
登録日2009-02-27
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.
Nature, 459, 2009
3GFY
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BU of 3gfy by Molmil
Klebsiella pneumoniae BlrP1 with FMN and cyclic diGMP, no metal ions
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FLAVIN MONONUCLEOTIDE, Klebsiella pneumoniae BlrP1
著者Barends, T, Hartmann, E, Griese, J, Beitlich, T, Kirienko, N, Ryjenkov, D, Reinstein, J, Shoeman, R, Gomelsky, M, Schlichting, I.
登録日2009-02-27
公開日2009-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.
Nature, 459, 2009
8BKH
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BU of 8bkh by Molmil
Carboxymyoglobin dark state for comparison with power titration and 23 / 101 mJ/cm2 time series
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T, Schlichting, I.
登録日2022-11-09
公開日2024-01-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024
8BKN
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BU of 8bkn by Molmil
Carboxymyoglobin dark state for comparison with 5 mJ/cm2 time series
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T, Schlichting, I.
登録日2022-11-09
公開日2024-01-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024
2Q1D
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BU of 2q1d by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase complexed with magnesium and 2,5-dioxopentanoate
分子名称: 2,5-DIOXOPENTANOIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, MAGNESIUM ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q19
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BU of 2q19 by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase apo form
分子名称: 2-keto-3-deoxy-D-arabinonate dehydratase
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q1C
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BU of 2q1c by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase complexed with calcium and 2-oxobutyrate
分子名称: 2-KETOBUTYRIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, CALCIUM ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q18
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BU of 2q18 by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase
分子名称: 2-keto-3-deoxy-D-arabinonate dehydratase, PHOSPHATE ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
2Q1A
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BU of 2q1a by Molmil
2-keto-3-deoxy-D-arabinonate dehydratase complexed with magnesium and 2-oxobutyrate
分子名称: 2-KETOBUTYRIC ACID, 2-keto-3-deoxy-D-arabinonate dehydratase, MAGNESIUM ION
著者Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
登録日2007-05-24
公開日2008-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
5D5R
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BU of 5d5r by Molmil
Horse-heart myoglobin - deoxy state
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Barends, T, Schlichting, I.
登録日2015-08-11
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
8R8I
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BU of 8r8i by Molmil
Ensemble-refined carboxymyoglobin photolysis power titration, 56 mJ/cm2
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T, Schlichting, I.
登録日2023-11-29
公開日2024-01-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024
8R9D
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BU of 8r9d by Molmil
Multicopy-refined carboxymyoglobin photolysis time series at 23 mJ/cm2 laser fluence, 399 fs time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T, Schlichting, I.
登録日2023-11-30
公開日2024-01-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024
8R9P
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BU of 8r9p by Molmil
Multicopy-refined carboxymyoglobin photolysis time series at 23 mJ/cm2 laser fluence, 1297 fs time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T, Schlichting, I.
登録日2023-11-30
公開日2024-01-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024

 

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