Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7WEM
DownloadVisualize
BU of 7wem by Molmil
Solid-state NMR Structure of TFo c-Subunit Ring
分子名称: ATP synthase subunit c
著者Akutsu, H, Todokoro, Y, Kang, S.-J, Suzuki, T, Yoshida, M, Ikegami, T, Fujiwara, T.
登録日2021-12-23
公開日2022-08-10
最終更新日2022-08-24
実験手法SOLID-STATE NMR
主引用文献Chemical Conformation of the Essential Glutamate Site of the c -Ring within Thermophilic Bacillus F o F 1 -ATP Synthase Determined by Solid-State NMR Based on its Isolated c -Ring Structure.
J.Am.Chem.Soc., 144, 2022
1J0O
DownloadVisualize
BU of 1j0o by Molmil
High Resolution Crystal Structure of the wild type Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE
著者Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
登録日2002-11-19
公開日2003-11-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1J0P
DownloadVisualize
BU of 1j0p by Molmil
Three dimensional Structure of the Y43L mutant of Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
登録日2002-11-19
公開日2003-11-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (0.91 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1SNH
DownloadVisualize
BU of 1snh by Molmil
Solution structure of the DNA Decamer Duplex Containing Double TG Mismatches of Cis-syn Cyclobutane Pyrimidine Dimer
分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*GP*TP*GP*CP*G)-3'
著者Lee, J.H, Park, C.J, Shin, J.S, Ikegami, T, Akutsu, H, Choi, B.S.
登録日2004-03-11
公開日2004-05-18
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
2E5U
DownloadVisualize
BU of 2e5u by Molmil
C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic Bacillus PS3
分子名称: ATP synthase epsilon chain
著者Yagi, H, Akutsu, H.
登録日2006-12-25
公開日2007-07-10
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E5Y
DownloadVisualize
BU of 2e5y by Molmil
Epsilon subunit and ATP complex of F1F0-ATP synthase from the Thermophilic Bacillus PS3
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain
著者Yagi, H, Akutsu, H.
登録日2006-12-25
公開日2007-07-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E5T
DownloadVisualize
BU of 2e5t by Molmil
C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic bacillus PS3 in the presence of ATP condition
分子名称: ATP synthase epsilon chain
著者Yagi, H, Akutsu, H.
登録日2006-12-22
公開日2007-07-10
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1
Proc.Natl.Acad.Sci.Usa, 104, 2007
1WUZ
DownloadVisualize
BU of 1wuz by Molmil
Structure of EC1 domain of CNR
分子名称: Pcdha4 protein
著者Morishita, H, Umitsu, M, Yamaguchi, T, Murata, Y, Shibata, N, Udaka, K, Higuchi, Y, Akutsu, H, Yagi, T, Ikegami, T.
登録日2004-12-09
公開日2005-12-13
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Structural diversity of the first cadherin domains revealed by the structure of CNR/Protocadherin alpha
To be Published
1IT1
DownloadVisualize
BU of 1it1 by Molmil
Solution structures of ferrocytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: HEME C, cytochrome c3
著者Harada, E, Fukuoka, Y, Ohmura, T, Fukunishi, A, Kawai, G, Fujiwara, T, Akutsu, H.
登録日2001-12-29
公開日2002-07-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Redox-coupled conformational alternations in cytochrome c(3) from D. vulgaris Miyazaki F on the basis of its reduced solution structure.
J.Mol.Biol., 319, 2002
1WU0
DownloadVisualize
BU of 1wu0 by Molmil
Solution structure of subunit c of F1Fo-ATP synthase from the thermophilic bacillus PS3
分子名称: ATP synthase C chain
著者Nakano, T, Ikegami, T, Suzuki, T, Yoshida, M, Akutsu, H.
登録日2004-11-29
公開日2005-12-13
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献solution structure TF1Fo subunit c
To be Published
2CVC
DownloadVisualize
BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
分子名称: HEME C, High-molecular-weight cytochrome c precursor
著者Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
登録日2005-06-02
公開日2006-06-06
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of High-Molecular Weight Cytochrome c
To be Published
2CZP
DownloadVisualize
BU of 2czp by Molmil
Structural analysis of membrane-bound mastoparan-X by solid-state NMR
分子名称: Mastoparan X
著者Todokoro, Y, Fujiwara, T, Yumen, I, Fukushima, K, Kang, S.-W, Park, J.-S, Kohno, T, Wakamatsu, K, Akutsu, H.
登録日2005-07-14
公開日2006-07-04
最終更新日2022-03-09
実験手法SOLID-STATE NMR
主引用文献Structure of tightly membrane-bound mastoparan-x, a g-protein-activating Peptide, determined by solid-state NMR.
Biophys.J., 91, 2006
2D49
DownloadVisualize
BU of 2d49 by Molmil
Solution structure of the Chitin-Binding Domain of Streptomyces griseus Chitinase C
分子名称: chitinase C
著者Akagi, K, Watanabe, J, Hara, M, Kezuka, Y, Chikaishi, E, Yamaguchi, T, Akutsu, H, Nonaka, T, Watanabe, T, Ikegami, T.
登録日2005-10-11
公開日2006-10-11
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Identification of the substrate interaction region of the chitin-binding domain of Streptomyces griseus chitinase C
J.Biochem.(Tokyo), 139, 2006
2RQ7
DownloadVisualize
BU of 2rq7 by Molmil
Solution structure of the epsilon subunit chimera combining the N-terminal beta-sandwich domain from T. Elongatus bp-1 f1 and the C-terminal alpha-helical domain from spinach chloroplast F1
分子名称: ATP synthase epsilon chain,ATP synthase epsilon chain, chloroplastic
著者Yagi, H, Konno, H, Murakami-Fuse, T, Oroguchi, H, Akutsu, T, Ikeguchi, M, Hisabori, T.
登録日2009-03-03
公開日2010-01-12
最終更新日2020-01-01
実験手法SOLUTION NMR
主引用文献Structural and functional analysis of the intrinsic inhibitor subunit epsilon of F1-ATPase from photosynthetic organisms.
Biochem.J., 425, 2010
2RQ6
DownloadVisualize
BU of 2rq6 by Molmil
Solution structure of the epsilon subunit of the F1-atpase from thermosynechococcus elongatus BP-1
分子名称: ATP synthase epsilon chain
著者Yagi, H, Konno, H, Murakami-Fuse, T, Oroguchi, H, Akutsu, T, Ikeguchi, M, Hisabori, T.
登録日2009-03-03
公開日2010-01-12
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structural and functional analysis of the intrinsic inhibitor subunit epsilon of F1-ATPase from photosynthetic organisms.
Biochem.J., 425, 2010
2FFN
DownloadVisualize
BU of 2ffn by Molmil
The E41Q mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-12-20
公開日2006-12-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Roles of charged residues in pH-dependent redox properties of cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
BIOPHYSICS(BSJ), 2, 2006
2EWK
DownloadVisualize
BU of 2ewk by Molmil
The T24V mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-11-03
公開日2006-11-28
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
1WR5
DownloadVisualize
BU of 1wr5 by Molmil
Three dimensional Structure of the E41K mutant of Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, HEME C
著者Tomimoto, Y, Ogata, H, Higuchi, Y.
登録日2004-10-11
公開日2004-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1PIB
DownloadVisualize
BU of 1pib by Molmil
Solution structure of DNA containing CPD opposited by GA
分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3'
著者Lee, J.H, Park, C.J, Shin, J.S, Choi, B.S.
登録日2003-05-30
公開日2004-05-18
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
2YXC
DownloadVisualize
BU of 2yxc by Molmil
The H25M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-04-26
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
2YYW
DownloadVisualize
BU of 2yyw by Molmil
The F20M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2YYX
DownloadVisualize
BU of 2yyx by Molmil
The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2Z47
DownloadVisualize
BU of 2z47 by Molmil
The Y66L mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, HEME C
著者Higuchi, Y, Komori, H.
登録日2007-06-13
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2E84
DownloadVisualize
BU of 2e84 by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F) in the presence of zinc ion
分子名称: High-molecular-weight cytochrome c, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
著者Shibata, N, Suto, K, Sato, M, Morimoto, Y, Kitamura, M, Higuchi, Y.
登録日2007-01-17
公開日2008-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F)
To be Published
2E8D
DownloadVisualize
BU of 2e8d by Molmil
3D Structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR
分子名称: Beta-2-microglobulin
著者Fujiwara, T.
登録日2007-01-19
公開日2007-02-13
最終更新日2020-02-26
実験手法SOLID-STATE NMR
主引用文献3D structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR
Proc.Natl.Acad.Sci.Usa, 103, 2006

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon