Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1VCH
DownloadVisualize
BU of 1vch by Molmil
Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus
Descriptor: ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Rehse, P.H, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-08
Release date:2005-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus
To be Published
1VE4
DownloadVisualize
BU of 1ve4 by Molmil
ATP-Phosphoribosyltransferase(hisG) from Thermus thermophilus HB8
Descriptor: ATP phosphoribosyltransferase, GLYCEROL, SULFATE ION
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-27
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of ATP-phosphoribosyltransferase(HisG)
To be Published
1VDM
DownloadVisualize
BU of 1vdm by Molmil
Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3
Descriptor: purine phosphoribosyltransferase
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-23
Release date:2005-05-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3
To be Published
1VEF
DownloadVisualize
BU of 1vef by Molmil
Acetylornithine aminotransferase from Thermus thermophilus HB8
Descriptor: Acetylornithine/acetyl-lysine aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Matsumura, M, Goto, M, Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-30
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Three-Dimensional Strutcure of Acetylornithine aminotransferase from Thermus thermophilus HB8
To be Published
2CRQ
DownloadVisualize
BU of 2crq by Molmil
Solution structure of C-terminal domain of RIKEN cDNA 2810012L14
Descriptor: mitochondrial translational initiation factor 3
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C-terminal domain of RIKEN cDNA 2810012L14
To be published
2E63
DownloadVisualize
BU of 2e63 by Molmil
Solution structure of the NEUZ domain in KIAA1787 protein
Descriptor: KIAA1787 protein
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-25
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural and functional characterization of the NHR1 domain of the Drosophila neuralized E3 ligase in the notch signaling pathway.
J.Mol.Biol., 393, 2009
2D4R
DownloadVisualize
BU of 2d4r by Molmil
Crystal structure of TTHA0849 from Thermus thermophilus HB8
Descriptor: SULFATE ION, hypothetical protein TTHA0849
Authors:Nakabayashi, M, Shibata, N, Kuramitsu, S, Higuchi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-23
Release date:2005-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily.
Acta Crystallogr.,Sect.F, 61, 2005
2DB9
DownloadVisualize
BU of 2db9 by Molmil
Solution structure of the plus-3 domain of human KIAA0252 protein
Descriptor: Paf1/RNA polymerase II complex component
Authors:Yoneyama, M, Kigawa, T, Tochio, N, Nameki, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-06-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the plus-3 domain of human KIAA0252 protein
To be Published
2DCE
DownloadVisualize
BU of 2dce by Molmil
Solution structure of the SWIRM domain of human KIAA1915 protein
Descriptor: KIAA1915 protein
Authors:Yoneyama, M, Tochio, N, Umehara, T, Koshiba, S, Inoue, M, Tanaka, A, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-06
Release date:2006-07-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural and Functional Differences of SWIRM Domain Subtypes
J.Mol.Biol., 369, 2007
2DJQ
DownloadVisualize
BU of 2djq by Molmil
The solution structure of the first SH3 domain of mouse SH3 domain containing ring finger 2
Descriptor: SH3 domain containing ring finger 2
Authors:Sasagawa, A, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-05
Release date:2006-10-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the first SH3 domain of mouse SH3 domain containing ring finger 2
To be Published
2EO2
DownloadVisualize
BU of 2eo2 by Molmil
Solution structure of the insertion region (510-573) of FTHFS domain from mouse methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein
Descriptor: Adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230045M11 product:weakly similar to C1-tetrahydrofolate synthase
Authors:Kurosaki, C, Nagashima, T, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the insertion region (510-573) of FTHFS domain from mouse methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein
To be Published
2DYY
DownloadVisualize
BU of 2dyy by Molmil
Crystal structure of putative translation initiation inhibitor PH0854 from Pyrococcus horikoshii
Descriptor: UPF0076 protein PH0854
Authors:Ihsanawati, Kishishita, S, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-19
Release date:2007-03-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of putative translation initiation inhibitor PH0854 from Pyrococcus horikoshii
To be Published
2E61
DownloadVisualize
BU of 2e61 by Molmil
Solution structure of the zf-CW domain in zinc finger CW-type PWWP domain protein 1
Descriptor: ZINC ION, Zinc finger CW-type PWWP domain protein 1
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-25
Release date:2007-06-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into the zinc finger CW domain as a histone modification reader
Structure, 18, 2010
2E67
DownloadVisualize
BU of 2e67 by Molmil
Crystal structure of the hypothetical protein TTHB029 from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHB029, MAGNESIUM ION
Authors:Imagawa, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-26
Release date:2007-06-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the YdjC-family protein TTHB029 from Thermus thermophilus HB8: structural relationship with peptidoglycan N-acetylglucosamine deacetylase.
Biochem.Biophys.Res.Commun., 367, 2008
2D5A
DownloadVisualize
BU of 2d5a by Molmil
hypothetical protein from Pyrococcus horikoshii OT3
Descriptor: COENZYME A, hypothetical protein PH1109
Authors:Hiyama, T.B, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-31
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2D59
DownloadVisualize
BU of 2d59 by Molmil
hypothetical protein from Pyrococcus horikoshii OT3
Descriptor: hypothetical protein PH1109
Authors:Hiyama, T.B, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-31
Release date:2006-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2D1Y
DownloadVisualize
BU of 2d1y by Molmil
Crystal structure of TT0321 from Thermus thermophilus HB8
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, hypothetical protein TT0321
Authors:Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-02
Release date:2006-03-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Biochemical and structural characterization of a short-chain dehydrogenase/reductase of Thermus thermophilus HB8: a hyperthermostable aldose-1-dehydrogenase with broad substrate specificity.
Chem.Biol.Interact., 178, 2009
2DZL
DownloadVisualize
BU of 2dzl by Molmil
Solution Structure of the UBA domain in Human Protein FAM100B
Descriptor: Protein FAM100B
Authors:Zhao, C, Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-29
Release date:2007-03-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the UBA domain in Human Protein FAM100B
To be Published
2DOG
DownloadVisualize
BU of 2dog by Molmil
Solution structure of the N-terminal domain of RimM from Thermus thermophilus HB8
Descriptor: Probable 16S rRNA-processing protein rimM
Authors:Suzuki, S, Matsumoto, E, Tatsuguchi, A, Kawazoe, M, Kaminishi, T, Takemoto, C, Shirouzu, M, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-28
Release date:2007-04-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural characterization of the ribosome maturation protein, RimM
J.Bacteriol., 189, 2007
2DNU
DownloadVisualize
BU of 2dnu by Molmil
Solution structure of RSGI RUH-061, a SH3 domain from human
Descriptor: SH3 multiple domains 1
Authors:Ohashi, W, Hirota, H, Nagashima, T, Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-061, a SH3 domain from human
to be published
2EKZ
DownloadVisualize
BU of 2ekz by Molmil
Structural study of Project ID TTHB049 from Thermus thermophilus HB8 (L52M)
Descriptor: Alpha-ribazole-5'-phosphate phosphatase
Authors:Asada, Y, Matsuura, Y, Ono, N, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-26
Release date:2007-10-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural study of Project ID TTHB049 from Thermus thermophilus HB8 (L52M)
To be Published
2DZN
DownloadVisualize
BU of 2dzn by Molmil
Crystal structure analysis of yeast Nas6p complexed with the proteasome subunit, rpt3
Descriptor: 26S protease regulatory subunit 6B homolog, Probable 26S proteasome regulatory subunit p28
Authors:Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-29
Release date:2007-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome
Biochem.Biophys.Res.Commun., 359, 2007
2EKD
DownloadVisualize
BU of 2ekd by Molmil
Structural study of Project ID PH0250 from Pyrococcus horikoshii OT3
Descriptor: CHLORIDE ION, Hypothetical protein PH0250
Authors:Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-22
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural study of Project ID PH0250 from Pyrococcus horikoshii OT3
To be Published
2E89
DownloadVisualize
BU of 2e89 by Molmil
Crystal structure of Aquifex aeolicus TilS in a complex with ATP, Magnesium ion, and L-lysine
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, LYSINE, MAGNESIUM ION, ...
Authors:Kuratani, M, Yoshikawa, Y, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine
To be Published
2E9H
DownloadVisualize
BU of 2e9h by Molmil
Solution structure of the eIF-5_eIF-2B domain from human Eukaryotic translation initiation factor 5
Descriptor: Eukaryotic translation initiation factor 5, ZINC ION
Authors:Tomizawa, T, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-25
Release date:2008-01-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the eIF-5_eIF-2B domain from human Eukaryotic translation initiation factor 5
To be Published

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon