Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4C7O
DownloadVisualize
BU of 4c7o by Molmil
The structural basis of FtsY recruitment and GTPase activation by SRP RNA
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SIGNAL RECOGNITION PARTICLE PROTEIN, ...
Authors:Voigts-Hoffmann, F, Schmitz, N, Shen, K, Shan, S.O, Ataide, S.F, Ban, N.
Deposit date:2013-09-23
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structural Basis of Ftsy Recruitment and Gtpase Activation by Srp RNA
Mol.Cell, 52, 2013
1UL9
DownloadVisualize
BU of 1ul9 by Molmil
CGL2 ligandfree
Descriptor: galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULC
DownloadVisualize
BU of 1ulc by Molmil
CGL2 in complex with lactose
Descriptor: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULF
DownloadVisualize
BU of 1ulf by Molmil
CGL2 in complex with Blood Group A tetrasaccharide
Descriptor: alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULE
DownloadVisualize
BU of 1ule by Molmil
CGL2 in complex with linear B2 trisaccharide
Descriptor: alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULD
DownloadVisualize
BU of 1uld by Molmil
CGL2 in complex with blood group H type II
Descriptor: alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
1ULG
DownloadVisualize
BU of 1ulg by Molmil
CGL2 in complex with Thomsen-Friedenreich antigen
Descriptor: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, galectin-2
Authors:Walser, P.J, Haebel, P.W, Kuenzler, M, Kues, U, Aebi, M, Ban, N.
Deposit date:2003-09-12
Release date:2004-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Functional Analysis of the Fungal Galectin CGL2
STRUCTURE, 12, 2004
2AKI
DownloadVisualize
BU of 2aki by Molmil
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
1W26
DownloadVisualize
BU of 1w26 by Molmil
Trigger Factor in Complex with the Ribosome forms a Molecular Cradle for Nascent Proteins
Descriptor: TRIGGER FACTOR
Authors:Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N.
Deposit date:2004-06-28
Release date:2004-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
Nature, 431, 2004
1W2B
DownloadVisualize
BU of 1w2b by Molmil
Trigger Factor ribosome binding domain in complex with 50S
Descriptor: 23S RRNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L13P, ...
Authors:Ferbitz, L, Maier, T, Patzelt, H, Bukau, B, Deuerling, E, Ban, N.
Deposit date:2004-07-01
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
Nature, 431, 2004
7O81
DownloadVisualize
BU of 7o81 by Molmil
Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
Deposit date:2021-04-14
Release date:2021-06-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O7Y
DownloadVisualize
BU of 7o7y by Molmil
Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
Deposit date:2021-04-14
Release date:2021-06-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7O80
DownloadVisualize
BU of 7o80 by Molmil
Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
Deposit date:2021-04-14
Release date:2021-06-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7NSH
DownloadVisualize
BU of 7nsh by Molmil
39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2
Descriptor: 16S rRNA, 39S ribosomal protein L48, mitochondrial, ...
Authors:Kummer, E, Schubert, K, Ban, N.
Deposit date:2021-03-07
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NSJ
DownloadVisualize
BU of 7nsj by Molmil
55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*)
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S16, ...
Authors:Kummer, E, Schubert, K, Ban, N.
Deposit date:2021-03-07
Release date:2021-06-02
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7O7Z
DownloadVisualize
BU of 7o7z by Molmil
Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Bhatt, P.R, Scaiola, A, Leibundgut, M.A, Atkins, J.F, Ban, N.
Deposit date:2021-04-14
Release date:2021-06-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Science, 372, 2021
7NSI
DownloadVisualize
BU of 7nsi by Molmil
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
Authors:Kummer, E, Schubert, K, Ban, N.
Deposit date:2021-03-07
Release date:2021-06-02
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7O5H
DownloadVisualize
BU of 7o5h by Molmil
Ribosomal methyltransferase KsgA bound to small ribosomal subunit
Descriptor: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Stephan, N.C, Ries, A.B, Boehringer, D, Ban, N.
Deposit date:2021-04-08
Release date:2021-06-16
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of successive adenosine modifications by the conserved ribosomal methyltransferase KsgA.
Nucleic Acids Res., 49, 2021
7ODT
DownloadVisualize
BU of 7odt by Molmil
State C of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
7ODS
DownloadVisualize
BU of 7ods by Molmil
State B of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA, 39S ribosomal protein L10, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
7ODR
DownloadVisualize
BU of 7odr by Molmil
State A of the human mitoribosomal large subunit assembly intermediate
Descriptor: 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA, 39S ribosomal protein L10, ...
Authors:Lenarcic, T, Jaskolowski, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Saurer, M, Lee, R.G, Rackham, O, Filipovska, A, Ban, N.
Deposit date:2021-04-30
Release date:2021-06-23
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
Nat Commun, 12, 2021
7NQL
DownloadVisualize
BU of 7nql by Molmil
55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S16, ...
Authors:Kummer, E, Schubert, K, Ban, N.
Deposit date:2021-03-01
Release date:2021-05-05
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NQH
DownloadVisualize
BU of 7nqh by Molmil
55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S16, ...
Authors:Kummer, E, Schubert, K, Ban, N.
Deposit date:2021-03-01
Release date:2021-05-05
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NFX
DownloadVisualize
BU of 7nfx by Molmil
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Jomaa, A, Lee, J.H, Shan, S, Ban, N.
Deposit date:2021-02-08
Release date:2021-06-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Receptor compaction and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.
Sci Adv, 7, 2021
5O61
DownloadVisualize
BU of 5o61 by Molmil
The complete structure of the Mycobacterium smegmatis 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hentschel, J, Burnside, C, Mignot, I, Leibundgut, M, Boehringer, D, Ban, N.
Deposit date:2017-06-03
Release date:2017-07-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:The Complete Structure of the Mycobacterium smegmatis 70S Ribosome.
Cell Rep, 20, 2017

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon