Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7Y9L
DownloadVisualize
BU of 7y9l by Molmil
Crystal structure of P450 BM3-2F from Bacillus megaterium in complex with 2-Hydroxy-5-Nitrobenzonitrile
Descriptor: 5-nitro-2-oxidanyl-benzenecarbonitrile, Bifunctional cytochrome P450/NADPH--P450 reductase, NICKEL (II) ION, ...
Authors:Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-25
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of P450 BM3-2F from Bacillus megaterium in complex with 2-Hydroxy-5-Nitrobenzonitrile
to be published
5YGU
DownloadVisualize
BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
Descriptor: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
Authors:Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
Deposit date:2017-09-27
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
5ZY6
DownloadVisualize
BU of 5zy6 by Molmil
catechol methyltransferase spCOMT
Descriptor: Probable catechol O-methyltransferase 1, S-ADENOSYLMETHIONINE
Authors:Wang, Q, Xu, L.
Deposit date:2018-05-22
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:structural insight into spCOMT
To Be Published
6K87
DownloadVisualize
BU of 6k87 by Molmil
The closed state of RGLG1 VWA domain with MIDAS is occupied by water
Descriptor: E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:The closed state of RGLG1 VWA domain with MIDAS is occupied by water
To Be Published
6K82
DownloadVisualize
BU of 6k82 by Molmil
RGLG1 mutant-D338A E378A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:RGLG1 mutant-D338A E378A
To Be Published
6K83
DownloadVisualize
BU of 6k83 by Molmil
Structure of RGLG1 mutant-D207G
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:RGLG1 mutant-D207G
To Be Published
6K89
DownloadVisualize
BU of 6k89 by Molmil
The closed state of RGLG1 VWA domain
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.689 Å)
Cite:The closed state of RGLG1 VWA domain
To Be Published
6K8E
DownloadVisualize
BU of 6k8e by Molmil
Global regulatory element SarX
Descriptor: HTH-type transcriptional regulator SarX
Authors:Wang, Q.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of SarX from Staphylococcus aureus
To Be Published
5ZY5
DownloadVisualize
BU of 5zy5 by Molmil
spCOMT apo structure
Descriptor: Probable catechol O-methyltransferase 1
Authors:Wang, Q, Xu, L.
Deposit date:2018-05-22
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:structural and functional investigations of spCOMT
To Be Published
6K86
DownloadVisualize
BU of 6k86 by Molmil
The closed state of RGLG1 mutant-E378A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:The closed state of RGLG1 mutant-E378A
To Be Published
6K8B
DownloadVisualize
BU of 6k8b by Molmil
The open state of RGLG1 VWA domain
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The open state of RGLG1 VWA domain
To Be Published
5YWJ
DownloadVisualize
BU of 5ywj by Molmil
Global regulatory element SarX
Descriptor: HTH-type transcriptional regulator SarX
Authors:Wang, Q.
Deposit date:2017-11-29
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal structure of SarX from Staphylococcus aureus
To Be Published
6K85
DownloadVisualize
BU of 6k85 by Molmil
The closed state of RGLG1 mutant-D338A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:The closed state of RGLG1 mutant-D338A
To Be Published
6K8A
DownloadVisualize
BU of 6k8a by Molmil
RGLG1 VWA domain with MIDAS is occupied by water
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:RGLG1 VWA domain with MIDAS is occupied by water
To Be Published
6K88
DownloadVisualize
BU of 6k88 by Molmil
RGLG1 MIDAS binds calcium ion
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.788 Å)
Cite:RGLG1 MIDAS binds calcium ion
To Be Published
8IHO
DownloadVisualize
BU of 8iho by Molmil
Crystal structures of SARS-CoV-2 papain-like protease in complex with covalent inhibitors
Descriptor: Papain-like protease nsp3, ZINC ION, covalent inhibitor
Authors:Wang, Q, Hu, H, Li, M, Xu, Y.
Deposit date:2023-02-23
Release date:2024-01-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure-Based Design of Potent Peptidomimetic Inhibitors Covalently Targeting SARS-CoV-2 Papain-like Protease.
Int J Mol Sci, 24, 2023
8XT5
DownloadVisualize
BU of 8xt5 by Molmil
The closed state of RGLG5-VWA
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RGLG5
Authors:Wang, Q.
Deposit date:2024-01-10
Release date:2025-01-22
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Structure of the E3 ubiquitin ligase RGLG5 VWA domain
To Be Published
7E4I
DownloadVisualize
BU of 7e4i by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40/Tom5/Tom6 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Mitochondrial import receptor subunit TOM5, Mitochondrial import receptor subunit TOM6, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
7E4H
DownloadVisualize
BU of 7e4h by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Sorting assembly machinery 35 kDa subunit, Sorting assembly machinery 37 kDa subunit, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
7VG2
DownloadVisualize
BU of 7vg2 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 40-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a forward strand (5'-phosphorylation), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
7VG3
DownloadVisualize
BU of 7vg3 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 30-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a RNA forward strand (5'-phosphorylated), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
5ZKZ
DownloadVisualize
BU of 5zkz by Molmil
Crystal Structures of Mutant Endo-beta-1,4-xylanase II(Y77F) Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, GLYCEROL, IODIDE ION, ...
Authors:Zhang, X, Wan, Q.
Deposit date:2018-03-26
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of Endo-beta-1,4-xylanase II
to be published
5ZII
DownloadVisualize
BU of 5zii by Molmil
Crystal Structures of Mutant Endo-beta-1,4-xylanase II (Y88F)Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Zhang, X, Wan, Q.
Deposit date:2018-03-15
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of Endo-beta-1,4-xylanase II
to be published
5ZIW
DownloadVisualize
BU of 5ziw by Molmil
Crystal Structures of Mutant Endo-beta-1,4-xylanase(Y77F)
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:Zhang, X, Wan, Q.
Deposit date:2018-03-17
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of Endo-beta-1,4-xylanase II
to be published
6KVV
DownloadVisualize
BU of 6kvv by Molmil
Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose
Descriptor: Endo-1,4-beta-xylanase 2, GLYCEROL, IODIDE ION, ...
Authors:Li, C, Wan, Q.
Deposit date:2019-09-05
Release date:2021-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes: implications for the catalytic mechanism
To Be Published

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon