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3Q0M
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BU of 3q0m by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with p38alpha NREb
Descriptor: 5'-R(UP*GP*UP*AP*GP*AP*UP*A)-3', Pumilio homolog 1
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3Q0S
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BU of 3q0s by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO2 in complex with erk2 NRE
Descriptor: 5'-R(UP*GP*UP*AP*CP*AP*UP*C)-3', Pumilio homolog 2
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3QG9
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BU of 3qg9 by Molmil
crystal structure of FBF-2/gld-1 FBEa A7U mutant complex
Descriptor: 1,2-ETHANEDIOL, 5'-R(*UP*GP*UP*GP*CP*CP*UP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Koh, Y.Y, Wang, Y, Qiu, C, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
Deposit date:2011-01-24
Release date:2011-03-23
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
3Q0R
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BU of 3q0r by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO2 in complex with p38alpha NREb
Descriptor: 5'-R(UP*GP*UP*AP*GP*AP*UP*A)-3', Pumilio homolog 2
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3Q0O
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BU of 3q0o by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with erk2 NRE
Descriptor: 5'-R(UP*GP*UP*AP*CP*AP*UP*C)-3', Pumilio homolog 1
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3Q0L
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BU of 3q0l by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with p38alpha NREa
Descriptor: 5'-R(UP*GP*UP*AP*AP*AP*UP*A)-3', Pumilio homolog 1
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3Q0N
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BU of 3q0n by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with erk2 NRE
Descriptor: 5'-R(UP*GP*UP*AP*CP*AP*UP*C)-3', Pumilio homolog 1
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3QGB
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BU of 3qgb by Molmil
Crystal structure of FBF-2 R288Y mutant in complex with gld-1 FBEa
Descriptor: 5'-R(*UP*GP*UP*GP*CP*CP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Qiu, C, Koh, Y.Y, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
Deposit date:2011-01-24
Release date:2011-03-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
3Q0P
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BU of 3q0p by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO1 in complex with hunchback NRE
Descriptor: 5'-R(UP*GP*UP*AP*UP*AP*UP*A)-3', CHLORIDE ION, Pumilio homolog 1
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3Q0Q
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BU of 3q0q by Molmil
Crystal structure of the PUMILIO-homology domain from Human PUMILIO2 in complex with p38alpha NREa
Descriptor: 5'-R(UP*GP*UP*AP*AP*AP*UP*A)-3', Pumilio homolog 2
Authors:Lu, G, Hall, T.M.T.
Deposit date:2010-12-15
Release date:2011-03-16
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Structure, 19, 2011
3QGC
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BU of 3qgc by Molmil
Crystal structure of FBF-2 R288Y mutant in complex with gld-1 FBEa A7U mutant
Descriptor: 5'-R(*UP*GP*UP*GP*CP*CP*UP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Qiu, C, Koh, Y.Y, Opperman, L, Gross, L, Hall, T.M.T, Wickens, M.
Deposit date:2011-01-24
Release date:2011-03-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Stacking interactions in PUF-RNA complexes.
Rna, 17, 2011
7RZZ
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BU of 7rzz by Molmil
Crystal structure of FBF-2 in complex with LST-1 site A peptide and compact FBE RNA
Descriptor: Fem-3 mRNA-binding factor 2, Lateral Signaling Target, RNA
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2021-08-28
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Bipartite interaction sites differentially modulate RNA-binding affinity of a protein complex essential for germline stem cell self-renewal.
Nucleic Acids Res., 50, 2022
3BX2
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BU of 3bx2 by Molmil
Puf4 RNA binding domain bound to HO endonuclease RNA 3' UTR recognition sequence
Descriptor: HO endonuclease 3' UTR binding sequence, Protein PUF4, SODIUM ION, ...
Authors:Miller, M.T, Higgin, J.J, Hall, T.M.T.
Deposit date:2008-01-11
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
3BX3
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BU of 3bx3 by Molmil
Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence
Descriptor: COX17 RNA target sequence, Protein PUF4, SULFATE ION
Authors:Miller, M.T, Higgin, J.J, Hall, T.M.T.
Deposit date:2008-01-11
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
6LVR
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BU of 6lvr by Molmil
Crystal structure of the PPR domain of Arabidopsis thaliana protein-only RNase P 1 (PRORP1) in complex with tRNA
Descriptor: Proteinaceous RNase P 1, chloroplastic/mitochondrial, yeast phenylalanine tRNA
Authors:Teramoto, T, Hall, T.M.T.
Deposit date:2020-02-04
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA.
Nucleic Acids Res., 48, 2020
8SCH
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BU of 8sch by Molmil
TCEI_III NMR Structure
Descriptor: RNA (68-MER)
Authors:Warden, M.S, Mueller, G.A, Hall, T.M.T.
Deposit date:2023-04-05
Release date:2023-07-12
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:The translational repressor Glorund uses interchangeable RNA recognition domains to recognize Drosophila nanos.
Nucleic Acids Res., 51, 2023
8SCF
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BU of 8scf by Molmil
TCEIII NMR Structure
Descriptor: RNA (30-MER)
Authors:Warden, M.S, Mueller, G.A, Hall, T.M.T.
Deposit date:2023-04-05
Release date:2023-07-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The translational repressor Glorund uses interchangeable RNA recognition domains to recognize Drosophila nanos.
Nucleic Acids Res., 51, 2023
8SJ7
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BU of 8sj7 by Molmil
Crystal structure of FBF-2 (RBD+CT) in complex with compact FBE RNA
Descriptor: Fem-3 mRNA-binding factor 2, RNA (5'-R(*CP*UP*GP*UP*GP*AP*AP*UP*G)-3')
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2023-04-17
Release date:2023-09-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Intra- and inter-molecular regulation by intrinsically-disordered regions governs PUF protein RNA binding.
Nat Commun, 14, 2023
3BWT
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BU of 3bwt by Molmil
Crystal structure of the RNA binding domain of Puf4 from Saccharomyces cerevisiae
Descriptor: Protein PUF4
Authors:Miller, M.T, Higgin, J.J, Hall, T.M.T.
Deposit date:2008-01-10
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
6NWW
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BU of 6nww by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P212121 space group
Descriptor: CHLORIDE ION, Pumilio domain-containing protein C56F2.08c
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-07
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NX5
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BU of 6nx5 by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P21 space group
Descriptor: 1,2-ETHANEDIOL, Pumilio domain-containing protein C56F2.08c
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-08
Release date:2019-07-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NY5
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BU of 6ny5 by Molmil
Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA
Descriptor: MAGNESIUM ION, Pumilio domain-containing protein C56F2.08c, RNA (5'-R(P*UP*UP*AP*AP*UP*AP*AP*CP*UP*UP*AP*AP*U)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-11
Release date:2019-07-03
Last modified:2020-01-15
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
1RPU
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BU of 1rpu by Molmil
Crystal Structure of CIRV p19 bound to siRNA
Descriptor: 19 kDa protein, 5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*UP*CP*AP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3'
Authors:Vargason, J.M, Szittya, G, Burgyan, J, Hall, T.M.T.
Deposit date:2003-12-03
Release date:2004-01-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Size selective recognition of siRNA by an RNA silencing suppressor
Cell(Cambridge,Mass.), 115, 2003
6PUN
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BU of 6pun by Molmil
Crystal structure of a ternary complex of FBF-2 with LST-1 (site B) and compact FBE RNA
Descriptor: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, GLYCEROL, ...
Authors:Qiu, C, Campbell, Z.T, Hall, T.M.T.
Deposit date:2019-07-18
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity.
Elife, 8, 2019
7S02
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BU of 7s02 by Molmil
Crystal structure of FBF-2 in complex with LST-1 site A peptide and FBE RNA
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FBE RNA, ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2021-08-28
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Bipartite interaction sites differentially modulate RNA-binding affinity of a protein complex essential for germline stem cell self-renewal.
Nucleic Acids Res., 50, 2022

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PDB entries from 2024-08-07

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