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Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D6 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-09
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3.53 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TOZ

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D7 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (4.07 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP0

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D8 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-09
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3.57 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP2

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D10 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-09
Last modified:	2024-10-30
Method:	ELECTRON MICROSCOPY (3.72 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP1

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; Subclassification D9 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-09
Last modified:	2023-04-12
Method:	ELECTRON MICROSCOPY (3.81 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP8

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D12 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPA

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D14 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.6 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPC

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D15 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.91 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPE

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D16 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (4 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPF

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D17 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPL

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the M1 conformation, D4
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3.87 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TPH

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 2-RBD-up conformation - D3
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.58 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP9

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D13 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-10-16
Method:	ELECTRON MICROSCOPY (3.48 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TP7

Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; Subclassification D11 state
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-25
Release date:	2022-02-09
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3.48 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

7TOW

Antibody DH1058 Fab fragment bound to SARS-CoV-2 fusion peptide
Descriptor:	CALCIUM ION, DH1058 Fab Light chain, DH1058 Fab heavy chain, ...
Authors:	Gobeil, S, Acharya, P.
Deposit date:	2022-01-24
Release date:	2022-02-16
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	Structural diversity of the SARS-CoV-2 Omicron spike. Mol.Cell, 82, 2022

4MEZ

Crystal structure of M68L/M69T double mutant TEM-1
Descriptor:	Beta-lactamase TEM, CHLORIDE ION, GLYCEROL, ...
Authors:	Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:	2013-08-27
Release date:	2014-10-15
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (2.047 Å)
Cite:	The Structural Dynamics of Engineered beta-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function. Sci Rep, 9, 2019

4ID4

Crystal structure of chimeric beta-lactamase cTEM-17m
Descriptor:	Beta-lactamase TEM, Beta-lactamase PSE-4, CHLORIDE ION, ...
Authors:	Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:	2012-12-11
Release date:	2013-12-25
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.05 Å)
Cite:	Maintenance of Native-like Protein Dynamics May Not Be Required for Engineering Functional Proteins. Chem.Biol., 21, 2014

6X2C

SARS-CoV-2 u1S2q All Down RBD State Spike Protein Trimer
Descriptor:	Spike glycoprotein
Authors:	Henderson, R, Acharya, P.
Deposit date:	2020-05-20
Release date:	2020-05-27
Last modified:	2024-10-16
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Controlling the SARS-CoV-2 spike glycoprotein conformation. Nat.Struct.Mol.Biol., 27, 2020

6X2B

SARS-CoV-2 u1S2q 2-RBD Up Spike Protein Trimer
Descriptor:	Spike glycoprotein
Authors:	Henderson, R, Acharya, P.
Deposit date:	2020-05-20
Release date:	2020-05-27
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (3.6 Å)
Cite:	Controlling the SARS-CoV-2 spike glycoprotein conformation. Nat.Struct.Mol.Biol., 27, 2020

4R4R

Crystal structure of chimeric beta-lactamase cTEM-19m at 1.2 angstrom resolution
Descriptor:	Beta-lactamase TEM,Beta-lactamase PSE-4, CHLORIDE ION, MAGNESIUM ION
Authors:	Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:	2014-08-19
Release date:	2015-11-11
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.2 Å)
Cite:	The Structural Dynamics of Engineered beta-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function. Sci Rep, 9, 2019

4R4S

Crystal structure of chimeric beta-lactamase cTEM-19m at 1.1 angstrom resolution
Descriptor:	Beta-lactamase TEM,Beta-lactamase PSE-4, CHLORIDE ION, MAGNESIUM ION
Authors:	Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:	2014-08-19
Release date:	2015-11-11
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.1 Å)
Cite:	The Structural Dynamics of Engineered beta-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function. Sci Rep, 9, 2019

6X29

SARS-CoV-2 rS2d Down State Spike Protein Trimer
Descriptor:	Spike glycoprotein
Authors:	Henderson, R, Acharya, P.
Deposit date:	2020-05-20
Release date:	2020-05-27
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	Controlling the SARS-CoV-2 spike glycoprotein conformation. Nat.Struct.Mol.Biol., 27, 2020

6X2A

SARS-CoV-2 u1S2q 1-RBD Up Spike Protein Trimer
Descriptor:	Spike glycoprotein
Authors:	Henderson, R, Acharya, P.
Deposit date:	2020-05-20
Release date:	2020-05-27
Last modified:	2024-10-16
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Controlling the SARS-CoV-2 spike glycoprotein conformation. Nat.Struct.Mol.Biol., 27, 2020

9AYY

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5.1)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Zhang, Q.E, Acharya, P.
Deposit date:	2024-03-08
Release date:	2024-06-12
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	SARS-CoV-2 Omicron XBB lineage spike structures, conformations, antigenicity, and receptor recognition. Mol.Cell, 84, 2024

9AYW

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:	Zhang, Q.E, Acharya, P.
Deposit date:	2024-03-08
Release date:	2024-06-12
Last modified:	2024-11-06
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	SARS-CoV-2 Omicron XBB lineage spike structures, conformations, antigenicity, and receptor recognition. Mol.Cell, 84, 2024

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