Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5B1H
DownloadVisualize
BU of 5b1h by Molmil
Crystal structure of cystathionine beta-synthase from Lactobacillus plantarum
Descriptor: Cystathionine beta-synthase, GLYCEROL, SULFATE ION
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2015-12-04
Release date:2016-12-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
5B1I
DownloadVisualize
BU of 5b1i by Molmil
Crystal structure of K42A mutant of cystathionine beta-synthase from Lactobacillus plantarum in a complex with L-methionine
Descriptor: Cystathionine beta-synthase, N-[(3-HYDROXY-2-METHYL-5-{[(TRIHYDROXYPHOSPHORANYL)OXY]METHYL}PYRIDIN-4-YL)METHYLENE]METHIONINE, SULFATE ION
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2015-12-04
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
5BNQ
DownloadVisualize
BU of 5bnq by Molmil
Crystal structure of hRANKL-mRANK complex
Descriptor: CHLORIDE ION, PHOSPHATE ION, SODIUM ION, ...
Authors:Ren, J.
Deposit date:2015-05-26
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A RANKL mutant used as an inter-species vaccine for efficient immunotherapy of osteoporosis.
Sci Rep, 5, 2015
6JSA
DownloadVisualize
BU of 6jsa by Molmil
Crystal structure of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
5B51
DownloadVisualize
BU of 5b51 by Molmil
Crystal structure of heme binding protein HmuT R242A mutant
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
6JS9
DownloadVisualize
BU of 6js9 by Molmil
Crystal structure of the N-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JSC
DownloadVisualize
BU of 6jsc by Molmil
Crystal structure of the H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JSB
DownloadVisualize
BU of 6jsb by Molmil
Crystal structure of Heme binding protein HtaB from Corynebacterium glutamicum
Descriptor: CALCIUM ION, Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JSD
DownloadVisualize
BU of 6jsd by Molmil
Crystal structure of the domain-swapped dimer H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum
Descriptor: Hypothetical membrane protein, ISOPROPYL ALCOHOL
Authors:Muraki, N, Aono, S.
Deposit date:2019-04-08
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
5B50
DownloadVisualize
BU of 5b50 by Molmil
Crystal structure of heme binding protein HmuT Y240A
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B4Z
DownloadVisualize
BU of 5b4z by Molmil
Crystal structure of heme binding protein HmuT H141A mutant
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5JZQ
DownloadVisualize
BU of 5jzq by Molmil
Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals massive presence of multiple conformations
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Drozdzal, P, Gilski, M, Jaskolski, M.
Deposit date:2016-05-17
Release date:2016-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.78 Å)
Cite:Ultrahigh-resolution centrosymmetric crystal structure of Z-DNA reveals the massive presence of alternate conformations.
Acta Crystallogr D Struct Biol, 72, 2016
1WMY
DownloadVisualize
BU of 1wmy by Molmil
Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ...
Authors:Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
6EQL
DownloadVisualize
BU of 6eql by Molmil
Crystal Structure of Human Glycogenin-1 (GYG1) Tyr195pIPhe mutant complexed with manganese and UDP
Descriptor: 1,2-ETHANEDIOL, Glycogenin-1, MANGANESE (II) ION, ...
Authors:Bailey, H.J, Kopec, J, Bilyard, M.K, Bezerra, G.A, Seo Lee, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Davis, B.G, Yue, W.W.
Deposit date:2017-10-13
Release date:2017-12-20
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Palladium-mediated enzyme activation suggests multiphase initiation of glycogenesis.
Nature, 563, 2018
6EQJ
DownloadVisualize
BU of 6eqj by Molmil
Crystal Structure of Human Glycogenin-1 (GYG1) Tyr195pIPhe mutant, apo form
Descriptor: 1,2-ETHANEDIOL, Glycogenin-1
Authors:Bailey, H.J, Kopec, J, Bilyard, M.K, Bezerra, G.A, Seo Lee, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Davis, B.G, Yue, W.W.
Deposit date:2017-10-13
Release date:2017-12-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Palladium-mediated enzyme activation suggests multiphase initiation of glycogenesis.
Nature, 563, 2018
2E5B
DownloadVisualize
BU of 2e5b by Molmil
Crystal structure of Human NMPRTase as free-form
Descriptor: Nicotinamide phosphoribosyltransferase
Authors:Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
2E5D
DownloadVisualize
BU of 2e5d by Molmil
Crystal structure of Human NMPRTase complexed with nicotinamide
Descriptor: NICOTINAMIDE, Nicotinamide phosphoribosyltransferase
Authors:Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
6FWZ
DownloadVisualize
BU of 6fwz by Molmil
Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) (V264G mutant) in complex with UDP-GlcNAc
Descriptor: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, MAGNESIUM ION, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, ...
Authors:Pike, A.C.W, Dong, Y.Y, Chu, A, Tessitore, A, Goubin, S, Dong, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Berridge, G, Wang, D, Kupinska, K, Belaya, K, Beeson, D, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-03-07
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of DPAGT1 Explain Glycosylation Disease Mechanisms and Advance TB Antibiotic Design.
Cell, 175, 2018
2E5C
DownloadVisualize
BU of 2e5c by Molmil
Crystal structure of Human NMPRTase complexed with 5'-phosphoribosyl-1'-pyrophosphate
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Nicotinamide phosphoribosyltransferase
Authors:Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase
J.Biochem., 147, 2010
6FM9
DownloadVisualize
BU of 6fm9 by Molmil
Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1)
Descriptor: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Authors:Pike, A.C.W, Dong, Y.Y, Chu, A, Tessitore, A, Goubin, S, Dong, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Berridge, G, Wang, D, Kupinska, K, Belaya, K, Beeson, D, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-01-30
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of DPAGT1 Explain Glycosylation Disease Mechanisms and Advance TB Antibiotic Design.
Cell, 175, 2018
1WMZ
DownloadVisualize
BU of 1wmz by Molmil
Crystal Structure of C-type Lectin CEL-I complexed with N-acetyl-D-galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
2RQ0
DownloadVisualize
BU of 2rq0 by Molmil
Solution Structure of Mouse Lipocalin-type Prostaglandin D Synthase Possessing the Intrinsic Disulfide Bond
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Miyamoto, Y, Nishimura, S, Inui, T.
Deposit date:2008-12-24
Release date:2009-12-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural analysis of lipocalin-type prostaglandin D synthase complexed with biliverdin by small-angle X-ray scattering and multi-dimensional NMR.
J.Struct.Biol., 2009
2V1K
DownloadVisualize
BU of 2v1k by Molmil
Crystal structure of ferrous deoxymyoglobin at pH 6.8
Descriptor: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1H
DownloadVisualize
BU of 2v1h by Molmil
Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 5.2
Descriptor: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1G
DownloadVisualize
BU of 2v1g by Molmil
Crystal structure of radiation-induced myoglobin compound II - intermediate H at pH 5.2
Descriptor: GLYCEROL, HYDROXIDE ION, MYOGLOBIN, ...
Authors:Hersleth, H.-P, Dalhus, B, Gorbitz, C.H, Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon