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3VOA
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BU of 3voa by Molmil
Staphylococcus aureus FtsZ 12-316 GDP-form
Descriptor: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Yamane, J, Matsui, T, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
2YVE
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BU of 2yve by Molmil
Crystal structure of the methylene blue-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM, CHLORIDE ION, GLYCEROL, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
3VO9
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BU of 3vo9 by Molmil
Staphylococcus aureus FtsZ apo-form (SeMet)
Descriptor: Cell division protein FtsZ
Authors:Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
2YVH
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BU of 2yvh by Molmil
Crystal structure of the operator-binding form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 5'-D(*DGP*DGP*DTP*DCP*DGP*DGP*DTP*DAP*DCP*DAP*DGP*DTP*DTP*DA)-3', 5'-D(*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DAP*DCP*DCP*DGP*DAP*DCP*DC)-3', Transcriptional regulator
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2017-01-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
2Z2F
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BU of 2z2f by Molmil
X-ray Crystal Structure of Bovine Stomach Lysozyme
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Lysozyme C-2, SODIUM ION
Authors:Akieda, D, Nonaka, Y, Watanabe, N, Tanaka, I, Kamiya, M, Aizawa, T, Nitta, K, Demura, M, Kawano, K.
Deposit date:2007-05-21
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stability of Bovine Stomach Lysozyme in Acidic Condition
To be Published
2Z2E
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BU of 2z2e by Molmil
Crystal Structure of Canine Milk Lysozyme Stabilized against Non-enzymatic Deamidation
Descriptor: Lysozyme C, milk isozyme, SULFATE ION
Authors:Nonaka, Y, Akieda, D, Watanabe, N, Tanaka, I, Kamiya, M, Aizawa, T, Nitta, K, Demura, M, Kawano, K.
Deposit date:2007-05-21
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Spontaneous asparaginyl deamidation of canine milk lysozyme under mild conditions
Proteins, 72, 2008
3VO8
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BU of 3vo8 by Molmil
Staphylococcus aureus FtsZ GDP-form
Descriptor: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Matsui, T, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VPA
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BU of 3vpa by Molmil
Staphylococcus aureus FtsZ apo-form
Descriptor: Cell division protein FtsZ
Authors:Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-02-28
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
2ZOY
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BU of 2zoy by Molmil
The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum
Descriptor: GLYCEROL, Transcriptional regulator
Authors:Itou, H, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis
J.Biol.Chem., 280, 2005
2ZCX
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BU of 2zcx by Molmil
Crystal structure of TetR family transcriptional regulator SCO7815
Descriptor: TetR-family transcriptional regulator
Authors:Okada, U, Kondo, K, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2007-11-13
Release date:2008-11-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and functional analysis of TetR family transcriptional regulator SCO7815
To be Published
3VOB
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BU of 3vob by Molmil
Staphylococcus aureus FtsZ with PC190723
Descriptor: 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Yamane, J, Matsui, T, Mogi, N, Yamaguchi, H, Takemoto, H, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
2ZU7
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BU of 2zu7 by Molmil
Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
Descriptor: Mannosyl-3-phosphoglycerate synthase
Authors:Kawamura, T, Watanabe, N, Tanaka, I.
Deposit date:2008-10-14
Release date:2009-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
To be Published
3VW5
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BU of 3vw5 by Molmil
Crystal structure of sugar epimerase from ruminal bacterium
Descriptor: Cellobiose 2-epimerase
Authors:Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
Deposit date:2012-08-02
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Ruminococcus albus cellobiose 2-epimerase: structural insights into epimerization of unmodified sugar
Febs Lett., 587, 2013
3VXF
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BU of 3vxf by Molmil
X/N Joint refinement of Human alpha-thrombin-Bivalirudin complex PD5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BIVALIRUDIN, Thrombin heavy chain, ...
Authors:Yamada, T, Kurihara, K, Masumi, K, Tamada, T, Tomoyori, K, Ohnishi, Y, Tanaka, I, Kuroki, R, Niimura, N.
Deposit date:2012-09-12
Release date:2013-09-04
Last modified:2020-07-29
Method:NEUTRON DIFFRACTION (1.602 Å), X-RAY DIFFRACTION
Cite:Neutron and X-ray crystallographic analysis of the human alpha-thrombin-bivalirudin complex at pD 5.0: protonation states and hydration structure of the enzyme-product complex
Biochim.Biophys.Acta, 1834, 2013
2ZPA
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BU of 2zpa by Molmil
Crystal Structure of tRNA(Met) Cytidine Acetyltransferase
Descriptor: ACETYL COENZYME *A, ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
Authors:Chimnaronk, S, Manita, T, Yao, M, Tanaka, I.
Deposit date:2008-07-08
Release date:2009-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:RNA helicase module in an acetyltransferase that modifies a specific tRNA anticodon
Embo J., 28, 2009
2ZDS
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BU of 2zds by Molmil
Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2)
Descriptor: Putative DNA-binding protein
Authors:Begum, P, Gao, Y.G, Sakai, N, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2007-11-27
Release date:2008-12-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of SCO6571 from Streptomyces coelicolor A3(2).
Protein Pept.Lett., 15, 2008
2ZZF
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BU of 2zzf by Molmil
Crystal structure of alanyl-tRNA synthetase without oligomerization domain
Descriptor: Alanyl-tRNA synthetase, ZINC ION
Authors:Sokabe, M, Ose, T, Tokunaga, K, Nakamura, A, Nureki, O, Yao, M, Tanaka, I.
Deposit date:2009-02-10
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of alanyl-tRNA synthetase with editing domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
3VI6
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BU of 3vi6 by Molmil
Crystal Structure of human ribosomal protein L30e
Descriptor: 60S ribosomal protein L30, FORMIC ACID
Authors:Kawaguchi, A, Ose, T, Yao, M, Tanaka, I.
Deposit date:2011-09-21
Release date:2011-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystallization and preliminary X-ray structure analysis of human ribosomal protein L30e
Acta Crystallogr.,Sect.F, 67, 2011
3A1R
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BU of 3a1r by Molmil
Neutron crystal structure analysis of bovine pancreatic ribonuclease A
Descriptor: Ribonuclease pancreatic
Authors:Yagi, D, Tanaka, I, Niimura, N.
Deposit date:2009-04-21
Release date:2009-09-01
Last modified:2023-11-01
Method:NEUTRON DIFFRACTION (1.7 Å)
Cite:A neutron crystallographic analysis of phosphate-free ribonuclease A at 1.7 A resolution
Acta Crystallogr.,Sect.D, 65, 2009
3A7W
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BU of 3a7w by Molmil
Crystal Structure of Trypsin complexed with (E)-4-((tetrahydro-2H-pyran-2-yloxyimino)methyl)benzimidamide (soaking 4hours)
Descriptor: (E)-4-((tetrahydro-2H-pyran-2-yloxyimino)methyl)benzimidamide, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3A88
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BU of 3a88 by Molmil
Crystal Structure of Trypsin complexed with (E)-4-((2-nicotinoylhydrazono)methyl)benzimidamide (soaking 30 minutes)
Descriptor: (E)-4-((2-nicotinoylhydrazono)methyl)benzimidamide, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3A7V
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BU of 3a7v by Molmil
Crystal Structure of Trypsin complexed with 3-formylbenzimidamide
Descriptor: 3-formylbenzenecarboximidamide, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3A87
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BU of 3a87 by Molmil
Crystal Structure of Trypsin complexed with (E)-4-((2-nicotinoylhydrazono)methyl)benzimidamide (soaking 5 minutes)
Descriptor: (E)-4-((2-nicotinoylhydrazono)methyl)benzimidamide, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3A1Y
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BU of 3a1y by Molmil
The structure of archaeal ribosomal stalk P1/P0 complex
Descriptor: 50S ribosomal protein P1 (L12P), Acidic ribosomal protein P0
Authors:Naganuma, T, Yao, M, Nomura, N, Yu, J, Uchiumi, T, Tanaka, I.
Deposit date:2009-04-25
Release date:2009-11-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes
J.Biol.Chem., 285, 2010
3VXE
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BU of 3vxe by Molmil
Human alpha-thrombin-Bivalirudin complex at PD5.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BIVALIRUDIN, Thrombin heavy chain, ...
Authors:Yamada, T, Kurihara, K, Masumi, K, Tamada, T, Tomoyori, K, Ohnishi, Y, Tanaka, I, Kuroki, R, Niimura, N.
Deposit date:2012-09-12
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Neutron and X-ray crystallographic analysis of the human alpha-thrombin-bivalirudin complex at pD 5.0: protonation states and hydration structure of the enzyme-product complex
Biochim.Biophys.Acta, 1834, 2013

224004

數據於2024-08-21公開中

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