Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QSS
DownloadVisualize
BU of 4qss by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with N-Methyl-2-pyrrolidone (NMP)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-methylpyrrolidin-2-one, ATPase family AAA domain-containing protein 2, ...
Authors:Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-06
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
7QZH
DownloadVisualize
BU of 7qzh by Molmil
SFX structure of dye-type peroxidase DtpB D152A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
7OR6
DownloadVisualize
BU of 7or6 by Molmil
The crystal structure of the domain-swapped dimer of onconase
Descriptor: Protein P-30
Authors:Merlino, A, Loreto, D.
Deposit date:2021-06-04
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The crystal structure of the domain-swapped dimer of onconase highlights some catalytic and antitumor activity features of the enzyme.
Int.J.Biol.Macromol., 191, 2021
4RFA
DownloadVisualize
BU of 4rfa by Molmil
Crystal structure of cyclic nucleotide-binding domain containing protein from Listeria monocytogenes EGD-e
Descriptor: Lmo0740 protein
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Jedrzejczak, R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-25
Release date:2014-10-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of cyclic nucleotide-binding domain containing protein from Listeria monocytogenes EGD-e
To be Published
7QZE
DownloadVisualize
BU of 7qze by Molmil
SFX structure of dye-type peroxidase DtpB D152A variant in the ferryl state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, OXYGEN ATOM, ...
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
5K3Y
DownloadVisualize
BU of 5k3y by Molmil
Crystal structure of AuroraB/INCENP in complex with BI 811283
Descriptor: Aurora kinase B-A, Inner centromere protein A, N-methyl-N-(1-methylpiperidin-4-yl)-4-{[4-({(1R,2S)-2-[(propan-2-yl)carbamoyl]cyclopentyl}amino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}benzamide
Authors:Bader, G, Zahn, S.K, Zoephel, A.
Deposit date:2016-05-20
Release date:2016-08-17
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Pharmacological Profile of BI 847325, an Orally Bioavailable, ATP-Competitive Inhibitor of MEK and Aurora Kinases.
Mol.Cancer Ther., 15, 2016
7ORD
DownloadVisualize
BU of 7ord by Molmil
The crystal structure of the domain-swapped dimer of onconase (2)
Descriptor: ACETATE ION, Protein P-30, SULFATE ION
Authors:Merlino, A, Loreto, D.
Deposit date:2021-06-05
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The crystal structure of the domain-swapped dimer of onconase highlights some catalytic and antitumor activity features of the enzyme.
Int.J.Biol.Macromol., 191, 2021
5K7A
DownloadVisualize
BU of 5k7a by Molmil
Crystal structure of laccase fron Thermus thermophilus HB27 (sodium nitrate 1.5 min)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
Authors:Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
Deposit date:2016-05-25
Release date:2017-06-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Preserving metalic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
7QZF
DownloadVisualize
BU of 7qzf by Molmil
SFX structure of dye-type peroxidase DtpB D152A/N245A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Owen, R.L, Axford, D, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
4RD2
DownloadVisualize
BU of 4rd2 by Molmil
Structure of aIF2-gamma H97A variant from Sulfolobus solfataricus bound to GDPNP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
Deposit date:2014-09-18
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.585 Å)
Cite:Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
3BHT
DownloadVisualize
BU of 3bht by Molmil
Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor meriolin 3
Descriptor: 4-(4-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-amine, Cell division protein kinase 2, Cyclin-A2, ...
Authors:Echalier, A, Bettayeb, K, Ferandin, Y, Lozach, O, Clement, M, Valette, A, Liger, F, Marquet, B, Morris, J.C, Endicott, J.A, Joseph, B, Meijer, L.
Deposit date:2007-11-29
Release date:2008-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Meriolins, a new class of cell death inducing kinase inhibitors with enhanced selectivity for cyclin-dependent kinases
Cancer Res., 67, 2007
4QYR
DownloadVisualize
BU of 4qyr by Molmil
Streptomyces platensis isomigrastatin ketosynthase domain MgsE KS3
Descriptor: ACETIC ACID, AT-less polyketide synthase, CHLORIDE ION, ...
Authors:Kim, Y, Li, H, Endres, M, Babnigg, J, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-07-25
Release date:2014-08-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
7QZG
DownloadVisualize
BU of 7qzg by Molmil
SFX structure of dye-type peroxidase DtpB N245A variant in the ferric state
Descriptor: Dyp-type peroxidase family, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lucic, M, Worrall, J.A.R, Hough, M.A, Shilova, A, Axford, D.A, Owen, R.L, Tosha, T, Sugimoto, H, Owada, S.
Deposit date:2022-01-31
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Acs Catalysis, 12, 2022
4RE2
DownloadVisualize
BU of 4re2 by Molmil
Different transition state conformations for the hydrolysis of beta-mannosides and beta-glucosides in the rice Os7BGlu26 family GH1 beta-mannosidase/beta-glucosidase
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tankrathok, A, Iglesias-Fernandez, J, Williams, R.J, Hakki, Z, Robinson, R.C, Hrmova, M, Rovira, C, Williams, S.J, Ketudat Cairns, J.R.
Deposit date:2014-09-21
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Single Glycosidase Harnesses Different Pyranoside Ring Transition State Conformations for Hydrolysis of Mannosides and Glucosides
ACS CATALYSIS, 5, 2015
3STN
DownloadVisualize
BU of 3stn by Molmil
Structure of human LFABP (apo-LFABP)
Descriptor: Fatty acid-binding protein, liver
Authors:Sharma, A, Sharma, A.
Deposit date:2011-07-11
Release date:2011-08-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Fatty acid induced remodeling within the Human liver fatty acid binding protein
J.Biol.Chem., 2011
3JVT
DownloadVisualize
BU of 3jvt by Molmil
Calcium-bound Scallop Myosin Regulatory Domain (Lever Arm) with Reconstituted Complete Light Chains
Descriptor: CALCIUM ION, MAGNESIUM ION, Myosin essential light chain, ...
Authors:Himmel, D.M, Mui, S, O'Neall-Hennessey, E, Szent-Gyorgyi, A, Cohen, C.
Deposit date:2009-09-17
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The on-off switch in regulated myosins: different triggers but related mechanisms.
J.Mol.Biol., 394, 2009
5K7Y
DownloadVisualize
BU of 5k7y by Molmil
Crystal structure of enzyme in purine metabolism
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL
Authors:Skerlova, J, Hnizda, A, Pachl, P, Rezacova, P.
Deposit date:2016-05-27
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Oligomeric interface modulation causes misregulation of purine 5 -nucleotidase in relapsed leukemia.
Bmc Biol., 14, 2016
7OMB
DownloadVisualize
BU of 7omb by Molmil
Crystal structure of KOD DNA Polymerase in a ternary complex with a p/t duplex containing an extended 5' single stranded template overhang
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA polymerase, ...
Authors:Betz, K, Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2021-05-21
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase.
Chembiochem, 22, 2021
7OMG
DownloadVisualize
BU of 7omg by Molmil
Crystal structure of KOD DNA Polymerase in a ternary complex with an Uracil containing template
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Betz, K, Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2021-05-22
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase.
Chembiochem, 22, 2021
4QQ6
DownloadVisualize
BU of 4qq6 by Molmil
Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Survival motor neuron protein, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-26
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
5KBK
DownloadVisualize
BU of 5kbk by Molmil
Candida Albicans Superoxide Dismutase 5 (SOD5), E110A Mutant
Descriptor: COPPER (I) ION, Cell surface Cu-only superoxide dismutase 5, SULFATE ION
Authors:Galaleldeen, A, Peterson, R.L, Villarreal, J, Taylor, A.B, Hart, P.J.
Deposit date:2016-06-03
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.411 Å)
Cite:The Phylogeny and Active Site Design of Eukaryotic Copper-only Superoxide Dismutases.
J.Biol.Chem., 291, 2016
4QQD
DownloadVisualize
BU of 4qqd by Molmil
Crystal Structure of tandem tudor domains of UHRF1 in complex with a small organic molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, E3 ubiquitin-protein ligase UHRF1, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2014-08-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
7P53
DownloadVisualize
BU of 7p53 by Molmil
Crystal Structure of Human gamma-D-crystallin mutant C110M at 1.57 Angstroms resolution
Descriptor: Gamma-crystallin D
Authors:Strofaldi, A, Khan, A.R, McManus, J.
Deposit date:2021-07-14
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Surface Exposed Free Cysteine Suppresses Crystallization of Human gamma D-Crystallin.
J.Mol.Biol., 433, 2021
2IPR
DownloadVisualize
BU of 2ipr by Molmil
Origin binding domain of the SV40 large T antigen (residues 131-259). P21 crystal form
Descriptor: large T antigen
Authors:Martynowski, D, Bochkareva, E, Bochkarev, A.
Deposit date:2006-10-12
Release date:2006-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA
Embo J., 25, 2006
7OM3
DownloadVisualize
BU of 7om3 by Molmil
Crystal structure of KOD DNA Polymerase in a binary complex with Hypoxanthine containing template
Descriptor: 1,2-ETHANEDIOL, 21nt Template, BROMIDE ION, ...
Authors:Betz, K, Kropp, H.M, Diederichs, K, Marx, A.
Deposit date:2021-05-21
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase.
Chembiochem, 22, 2021

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon