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2B5B
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BU of 2b5b by Molmil
A reptilian defensin with anti-bacterial and anti-viral activity
Descriptor: Defensin
Authors:Chattopadhyay, S, Sinha, N.K, Banerjee, S, Roy, D, Chattopadhyay, D, Roy, S.
Deposit date:2005-09-28
Release date:2006-06-27
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Small cationic protein from a marine turtle has beta-defensin-like fold and antibacterial and antiviral activity.
Proteins, 64, 2006
5EKP
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BU of 5ekp by Molmil
Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB (WT)
Descriptor: MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE, Uncharacterized glycosyltransferase sll0501
Authors:Ardiccioni, C, Clarke, O.B, Tomasek, D, Banerjee, S, Rajashankar, K.R, Liu, Q, Shapiro, L, Mancia, F, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2015-11-03
Release date:2016-01-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB and insights into the mechanism of catalysis.
Nat Commun, 7, 2016
6D9Z
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BU of 6d9z by Molmil
Structure of CysZ, a sulfate permease from Pseudomonas Denitrificans
Descriptor: Sulfate transporter CysZ, octyl beta-D-glucopyranoside
Authors:Sanghai, Z.A, Clarke, O.B, Liu, Q, Banerjee, S, Rajashankar, K.R, Hendrickson, W.A, Mancia, F.
Deposit date:2018-04-30
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.4021318 Å)
Cite:Structure-based analysis of CysZ-mediated cellular uptake of sulfate.
Elife, 7, 2018
5U8Y
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BU of 5u8y by Molmil
Crystal structure of Co-CAO1
Descriptor: COBALT (II) ION, Carotenoid oxygenase 1
Authors:Sui, X, Palczewski, K, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017
5U90
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BU of 5u90 by Molmil
Crystal structure of Co-CAO1 in complex with resveratrol
Descriptor: COBALT (II) ION, Carotenoid oxygenase 1, DIMETHYL SULFOXIDE, ...
Authors:Sui, X, Palczewski, k, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017
5SWW
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BU of 5sww by Molmil
Crystal Structure of Human APOBEC3A complexed with ssDNA
Descriptor: DNA 15-Mer, DNA dC->dU-editing enzyme APOBEC-3A, GLYCEROL, ...
Authors:Shi, K, Banerjee, S, Kurahashi, K, Aihara, H.
Deposit date:2016-08-09
Release date:2016-12-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.151 Å)
Cite:Structural basis for targeted DNA cytosine deamination and mutagenesis by APOBEC3A and APOBEC3B.
Nat. Struct. Mol. Biol., 24, 2017
5U8X
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BU of 5u8x by Molmil
Crystal structure of Fe-CAO1
Descriptor: BENZOIC ACID, CHLORIDE ION, Carotenoid oxygenase 1, ...
Authors:Sui, X, Palczewski, K, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.165 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017
5U97
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BU of 5u97 by Molmil
Crystal structure of Co-CAO1 in complex with piceatannol
Descriptor: BENZOIC ACID, COBALT (II) ION, Carotenoid oxygenase 1, ...
Authors:Sui, X, Palczewski, K, Banerjee, S, Kiser, P.D.
Deposit date:2016-12-15
Release date:2017-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Spectroscopy of Alkene-Cleaving Dioxygenases Containing an Atypically Coordinated Non-Heme Iron Center.
Biochemistry, 56, 2017
5TD5
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BU of 5td5 by Molmil
Crystal Structure of Human APOBEC3B variant complexed with ssDNA
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(P*TP*TP*CP*AP*T)-3'), ...
Authors:Shi, K, Banerjee, S, Kurahashi, K, Aihara, H.
Deposit date:2016-09-16
Release date:2016-12-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.718 Å)
Cite:Structural basis for targeted DNA cytosine deamination and mutagenesis by APOBEC3A and APOBEC3B.
Nat. Struct. Mol. Biol., 24, 2017
5VGL
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BU of 5vgl by Molmil
Crystal structure of lachrymatory factor synthase from Allium cepa
Descriptor: Lachrymatory-factor synthase
Authors:Silvaroli, J.A, Pleshinger, M.J, Banerjee, S, Kiser, P.D, Golczak, M.
Deposit date:2017-04-11
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enzyme That Makes You Cry-Crystal Structure of Lachrymatory Factor Synthase from Allium cepa.
ACS Chem. Biol., 12, 2017
5HGJ
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BU of 5hgj by Molmil
Structure of integrin alpha1beta1 and alpha2beta1 I-domains explain differential calcium-mediated ligand recognition
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Brown, K.L, Banerjee, S, Feigley, A, Abe, H, Blackwell, T, Zent, R, Pozzi, A, Hudson, B.H.
Deposit date:2016-01-08
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Salt-bridge modulates differential calcium-mediated ligand binding to integrin alpha 1- and alpha 2-I domains.
Sci Rep, 8, 2018
5HJ2
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BU of 5hj2 by Molmil
Integrin alpha2beta1 I-domain
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Brown, K.L, Banerjee, S.
Deposit date:2016-01-12
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Salt-bridge modulates differential calcium-mediated ligand binding to integrin alpha 1- and alpha 2-I domains.
Sci Rep, 8, 2018
5ILO
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BU of 5ilo by Molmil
Crystal structure of photoreceptor dehydrogenase from Drosophila melanogaster
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Photoreceptor dehydrogenase, isoform C
Authors:Hofmann, L, Tsybovsky, Y, Banerjee, S.
Deposit date:2016-03-04
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural Insights into the Drosophila melanogaster Retinol Dehydrogenase, a Member of the Short-Chain Dehydrogenase/Reductase Family.
Biochemistry, 55, 2016
5ILG
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BU of 5ilg by Molmil
Crystal structure of photoreceptor dehydrogenase from Drosophila melanogaster
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Hofmann, L, Tsybovsky, Y, Banerjee, S.
Deposit date:2016-03-04
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into the Drosophila melanogaster Retinol Dehydrogenase, a Member of the Short-Chain Dehydrogenase/Reductase Family.
Biochemistry, 55, 2016
6WQX
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BU of 6wqx by Molmil
Human PRPK-TPRKB complex
Descriptor: EKC/KEOPS complex subunit TP53RK, EKC/KEOPS complex subunit TPRKB, MAGNESIUM ION, ...
Authors:Li, J, Ma, X.L, Banerjee, S, Dong, Z.G.
Deposit date:2020-04-29
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of the human PRPK-TPRKB complex.
Commun Biol, 4, 2021
7K32
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BU of 7k32 by Molmil
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Descriptor: DNA (27-MER), Endonuclease Q, MAGNESIUM ION, ...
Authors:Shi, K, Moeller, N.M, Banerjee, S, Yin, L, Orellana, K, Aihara, H.
Deposit date:2020-09-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K33
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BU of 7k33 by Molmil
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Descriptor: DNA (27-MER), Endonuclease Q, MAGNESIUM ION, ...
Authors:Shi, K, Moeller, N.M, Banerjee, S, Yin, L, Orellana, K, Aihara, H.
Deposit date:2020-09-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K30
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BU of 7k30 by Molmil
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dU at the active site
Descriptor: 1,2-ETHANEDIOL, DNA (27-MER), Endonuclease Q, ...
Authors:Shi, K, Moeller, N.M, Banerjee, S, Yin, L, Orellana, K, Aihara, H.
Deposit date:2020-09-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K31
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BU of 7k31 by Molmil
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dI at the active site
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (27-MER), ...
Authors:Shi, K, Moeller, N.M, Banerjee, S, Yin, L, Orellana, K, Aihara, H.
Deposit date:2020-09-10
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q.
Proc.Natl.Acad.Sci.USA, 118, 2021
6WMV
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BU of 6wmv by Molmil
Structure of a phosphatidylinositol-phosphate synthase (PIPS) from Mycobacterium kansasii with evidence of substrate binding
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,3',3''-phosphanetriyltripropanoic acid, AfCTD-Phosphatidylinositol-phosphate synthase (PIPS) fusion, ...
Authors:Belcher Dufrisne, M, Jorge, C.D, Timoteo, C.G, Petrou, V.I, Ashraf, K.U, Banerjee, S, Clarke, O.B, Santos, H, Mancia, F.
Deposit date:2020-04-21
Release date:2020-05-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.142 Å)
Cite:Structural and Functional Characterization of Phosphatidylinositol-Phosphate Biosynthesis in Mycobacteria.
J.Mol.Biol., 432, 2020
6X6O
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BU of 6x6o by Molmil
Crystal structure of T4 protein Spackle as determined by native SAD phasing
Descriptor: CHLORIDE ION, Protein spackle
Authors:Shi, K, Kurniawan, F, Banerjee, S, Moeller, N.H, Aihara, H.
Deposit date:2020-05-28
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal structure of bacteriophage T4 Spackle as determined by native SAD phasing.
Acta Crystallogr D Struct Biol, 76, 2020
6WM5
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BU of 6wm5 by Molmil
Structure of a phosphatidylinositol-phosphate synthase (PIPS) from Mycobacterium kansasii
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 3,3',3''-phosphanetriyltripropanoic acid, ...
Authors:Belcher Dufrisne, M, Jorge, C.D, Timoteo, C.G, Petrou, V.I, Ashraf, K.U, Banerjee, S, Clarke, O.B, Santos, H, Mancia, F, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2020-04-20
Release date:2020-05-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Structural and Functional Characterization of Phosphatidylinositol-Phosphate Biosynthesis in Mycobacteria.
J.Mol.Biol., 432, 2020
4RRY
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BU of 4rry by Molmil
Crystal Structure of Apo Murine H90W Cyclooxygenase-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Prostaglandin G/H synthase 2, ...
Authors:Xu, S, Blobaum, A.L, Banerjee, S, Marnett, L.J.
Deposit date:2014-11-06
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:Action at a Distance: MUTATIONS OF PERIPHERAL RESIDUES TRANSFORM RAPID REVERSIBLE INHIBITORS TO SLOW, TIGHT BINDERS OF CYCLOOXYGENASE-2.
J.Biol.Chem., 290, 2015
4RUT
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BU of 4rut by Molmil
crystal structure of murine cyclooxygenase-2 with 13-methyl-arachidonic Acid
Descriptor: (5Z,8Z,11Z,13S,14Z)-13-methylicosa-5,8,11,14-tetraenoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xu, S, Kudalkar, S.N, Banerjee, S, Makriyannis, A, Nikas, S.P, Marnett, L.J.
Deposit date:2014-11-21
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:13-methylarachidonic Acid is a positive allosteric modulator of endocannabinoid oxygenation by cyclooxygenase.
J.Biol.Chem., 290, 2015
4RRX
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BU of 4rrx by Molmil
Crystal Structure of Apo Murine V89W Cyclooxygenase-2 Complexed with Lumiracoxib
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Prostaglandin G/H synthase 2, ...
Authors:Xu, S, Blobaum, A.L, Banerjee, S, Marnett, L.J.
Deposit date:2014-11-06
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Action at a Distance: MUTATIONS OF PERIPHERAL RESIDUES TRANSFORM RAPID REVERSIBLE INHIBITORS TO SLOW, TIGHT BINDERS OF CYCLOOXYGENASE-2.
J.Biol.Chem., 290, 2015

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數據於2024-07-10公開中

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