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Crystal structure of C117S mutant of human acidic fibroblast growth factor
Descriptor:	CITRATE ANION, Fibroblast growth factor 1, IMIDAZOLE, ...
Authors:	Blaber, M, Xia, X.
Deposit date:	2014-05-09
Release date:	2015-03-11
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.491 Å)
Cite:	Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci., 104, 2015

4Q9P

Crystal structure of C16T/K12V/C117V/P134V mutant of human acidic fibroblast growth factor
Descriptor:	Fibroblast growth factor 1
Authors:	Blaber, M, Xia, X.
Deposit date:	2014-05-01
Release date:	2015-03-11
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci., 104, 2015

7WDP

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ...
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2022-11-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.39 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022

7WDS

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	Beta-glucosidase, SULFATE ION, beta-D-xylopyranose
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2022-11-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.68 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022

7WDV

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2022-11-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.812 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022

7WDN

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	alpha-D-glucopyranose, beta-glucosidase
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2023-01-04
Last modified:	2024-05-29
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides. Appl.Microbiol.Biotechnol., 106, 2022

7WDO

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2022-11-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.21 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022

7WDR

Crystal structures of MeBglD2 in complex with various saccharides
Descriptor:	4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION
Authors:	Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:	2021-12-22
Release date:	2022-11-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022

4OW4

Beta-trefoil designed by folding nucleus symmetric expansion ("Phifoil")
Descriptor:	Beta-terfoil designed by folding nucleus symmetric expansion ("Phifoil"), SULFATE ION
Authors:	Blaber, M, Longo, L.M.
Deposit date:	2014-01-31
Release date:	2014-12-17
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.148 Å)
Cite:	Evolution and design of protein structure by folding nucleus symmetric expansion. Structure, 22, 2014

4QAL

Crystal structure of C117A mutant of human acidic fibroblast growth factor
Descriptor:	CITRATE ANION, Fibroblast growth factor 1
Authors:	Blaber, M, Xia, X.
Deposit date:	2014-05-05
Release date:	2015-03-11
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci., 104, 2015

3HOM

Crystal structure of oxidized A66C mutant of Human acidic fibroblast growth factor
Descriptor:	Acidic fibroblast growth factor, FORMIC ACID, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2009-06-02
Release date:	2009-10-06
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structural basis of conserved cysteine in the fibroblast growth factor family: evidence for a vestigial half-cystine. J.Mol.Biol., 393, 2009

3VU3

Crystal structure of the Hfq and catalase HPII complex
Descriptor:	Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE, Protein hfq
Authors:	Watanabe, M, Yonekura, K.
Deposit date:	2012-06-15
Release date:	2013-11-20
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (2.85 Å)
Cite:	Post-Transcriptional Regulator Hfq Binds Catalase HPII: Crystal Structure of the Complex Plos One, 8, 2013

4D8H

Crystal structure of Symfoil-4P/PV2: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 2 (6xLeu / PV1)
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo protein
Authors:	Blaber, M, Longo, L.
Deposit date:	2012-01-10
Release date:	2013-01-16
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.901 Å)
Cite:	Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA, 110, 2013

7DE8

Crystal Structure of outer membrane protein PorB with G103K mutations from Neisseria meningitidis W135
Descriptor:	Outer membrane protein
Authors:	Tanabe, M, Kattner, C.
Deposit date:	2020-11-02
Release date:	2021-03-31
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.76 Å)
Cite:	An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding. Biochim Biophys Acta Biomembr, 1863, 2021

3Q7Y

Crystal structure of K15R/E18D/Y22W/H41G/F44W/E51D/E53P/K57R/E60D/Y64W/H82G/F85W/E90D/E94P/K98R/E101D/Y108W/H129G/F132W/E137D Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor:	De novo designed beta-trefoil architecture with symmetric primary structure
Authors:	Blaber, M, Lee, J.
Deposit date:	2011-01-05
Release date:	2012-01-11
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA, 110, 2013

3Q7W

Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1
Descriptor:	SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:	Blaber, M, Lee, J.
Deposit date:	2011-01-05
Release date:	2012-01-11
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA, 110, 2013

3Q7X

Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:	Blaber, M, Lee, J.
Deposit date:	2011-01-05
Release date:	2012-01-11
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA, 110, 2013

2LGC

Joint NMR and X-ray refinement reveals the structure of a novel dibenzo[a,d]cycloheptenone inhibitor/p38 MAP kinase complex in solution
Descriptor:	Mitogen-activated protein kinase 14
Authors:	Habeck, M.
Deposit date:	2011-07-25
Release date:	2012-07-25
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	Inferential NMR/X-ray-based structure determination of a dibenzo[a,d]cycloheptenone inhibitor-p38alpha MAP kinase complex in solution Angew.Chem.Int.Ed.Engl., 51, 2012

2N64

NMR Structure of the C-terminal Coiled-Coil Domain of CIN85
Descriptor:	SH3 domain-containing kinase-binding protein 1
Authors:	Habeck, M, Becker, S, Griesinger, C, Wong, L.E.
Deposit date:	2015-08-11
Release date:	2016-07-13
Last modified:	2024-05-01
Method:	SOLUTION NMR
Cite:	The adaptor protein CIN85 assembles intracellular signaling clusters for B cell activation. Sci.Signal., 9, 2016

3BA5

Crystal structure of D28A mutant of Human acidic fibroblast growth factor
Descriptor:	FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2007-11-07
Release date:	2008-04-15
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008

3BAD

Crystal structure of D70A/H93G mutant of Human acidic fibroblast growth factor
Descriptor:	Heparin-binding growth factor 1, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2007-11-07
Release date:	2008-04-15
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008

3BA7

Crystal structure of L26N/D28A mutant of Human acidic fibroblast growth factor
Descriptor:	FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2007-11-07
Release date:	2008-04-15
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008

3BA4

Crystal structure of L26D mutant of Human acidic fibroblast growth factor
Descriptor:	FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2007-11-07
Release date:	2008-04-15
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008

3B9U

Crystal structure of L26N/D28N/H93G mutant of Human acidic fibroblast growth factor
Descriptor:	Heparin-binding growth factor 1, SULFATE ION
Authors:	Blaber, M, Lee, J.
Deposit date:	2007-11-06
Release date:	2008-04-15
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.55 Å)
Cite:	A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008

3W2T

Crystal structure of human depiptidyl peptidase IV (DPP-4) in complex with vildagliptin
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{[(1r,3s,5R,7S)-3-hydroxytricyclo[3.3.1.1~3,7~]decan-1-yl]amino}-1-{(2S)-2-[(E)-iminomethyl]pyrrolidin-1-yl}ethan-1-o ne, ...
Authors:	Kishida, H, Nabeno, M, Miyaguchi, I, Tanaka, Y, Katou, R, Akahoshi, F.
Deposit date:	2012-12-04
Release date:	2013-05-15
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (2.36 Å)
Cite:	A comparative study of the binding modes of recently launched dipeptidyl peptidase IV inhibitors in the active site Biochem.Biophys.Res.Commun., 434, 2013

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