Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7YPV
DownloadVisualize
BU of 7ypv by Molmil
Crystal structure of OrE-ST-F
Descriptor: Acetyltransferase, Streptothricin F
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-08-04
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.415 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7YPU
DownloadVisualize
BU of 7ypu by Molmil
OrfE-CoA-glycylthricin complex
Descriptor: Acetyltransferase, COENZYME A, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-08-04
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.357 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
6M2U
DownloadVisualize
BU of 6m2u by Molmil
The crystal structure of benzoate coenzyme A ligase double mutant (H333A/I334A) in complex with 2-chloro-1,3-thiazole-5-carboxylate-AMP
Descriptor: 2-chloranyl-1,3-thiazole-5-carboxylic acid, ADENOSINE MONOPHOSPHATE, Benzoate-coenzyme A ligase
Authors:Li, T.L, Adhikari, K.
Deposit date:2020-02-29
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.709 Å)
Cite:Chemoenzymatic Synthesis and Biological Evaluation for Bioactive Molecules Derived from Bacterial Benzoyl Coenzyme A Ligase and Plant Type III Polyketide Synthase.
Biomolecules, 10, 2020
8GRI
DownloadVisualize
BU of 8gri by Molmil
Orf1-E312A-glycine-glycylthricin
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-09-01
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.365 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7VZ6
DownloadVisualize
BU of 7vz6 by Molmil
The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase in complex with UDP-glucose
Descriptor: Putative UDP-N-acetylglucosamine 2-epimerase, SODIUM ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Li, T.L, Rattinam, R.
Deposit date:2021-11-15
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:KasQ an Epimerase Primes the Biosynthesis of Aminoglycoside Antibiotic Kasugamycin and KasF/H Acetyltransferases Inactivate Its Activity.
Biomedicines, 10, 2022
7VZA
DownloadVisualize
BU of 7vza by Molmil
The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase in complex with UDP
Descriptor: Putative UDP-N-acetylglucosamine 2-epimerase, SODIUM ION, URIDINE-5'-DIPHOSPHATE
Authors:Li, T.L, Rattinam, R.
Deposit date:2021-11-15
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:KasQ an Epimerase Primes the Biosynthesis of Aminoglycoside Antibiotic Kasugamycin and KasF/H Acetyltransferases Inactivate Its Activity.
Biomedicines, 10, 2022
7VYY
DownloadVisualize
BU of 7vyy by Molmil
The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase
Descriptor: Putative UDP-N-acetylglucosamine 2-epimerase, SODIUM ION
Authors:Li, T.L, Rattinam, R.
Deposit date:2021-11-15
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.443 Å)
Cite:KasQ an Epimerase Primes the Biosynthesis of Aminoglycoside Antibiotic Kasugamycin and KasF/H Acetyltransferases Inactivate Its Activity.
Biomedicines, 10, 2022
6M2O
DownloadVisualize
BU of 6m2o by Molmil
Double mutant(H333A/I334A) crystal structure of benzoate coenzyme A ligase
Descriptor: Benzoate-coenzyme A ligase
Authors:Li, T.L, Adhikari, K.
Deposit date:2020-02-28
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Chemoenzymatic Synthesis and Biological Evaluation for Bioactive Molecules Derived from Bacterial Benzoyl Coenzyme A Ligase and Plant Type III Polyketide Synthase.
Biomolecules, 10, 2020
7F6X
DownloadVisualize
BU of 7f6x by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: 1H-INDOLE-3-CARBALDEHYDE, Cupin domain-containing protein, FE (III) ION, ...
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-06-26
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-MediatedLewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EU6
DownloadVisualize
BU of 7eu6 by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: Cupin domain-containing protein, FE (III) ION, PHOSPHITE ION
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-05-16
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.050108 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EQK
DownloadVisualize
BU of 7eqk by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: (E)-3-(1H-indol-3-yl)-2-oxidanyl-but-2-enoic acid, 1-(1~{H}-indol-3-yl)ethanone, Cupin domain-containing protein, ...
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-05-03
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04001021 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EUZ
DownloadVisualize
BU of 7euz by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: (2S,3R)-2-azanyl-3-(1H-indol-3-yl)butanoic acid, Cupin domain-containing protein, FE (III) ION, ...
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-05-19
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91028166 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EUP
DownloadVisualize
BU of 7eup by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: (2S,3R)-2-azanyl-3-phenyl-butanoic acid, Cupin domain-containing protein, FE (III) ION
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-05-18
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11043429 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
7EUE
DownloadVisualize
BU of 7eue by Molmil
Structural and mechanistic studies of a novel non-heme iron epimerase/lyase and its utilization in chemoselective synthesis.
Descriptor: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, Cupin domain-containing protein, FE (III) ION
Authors:Li, T.L, Li, Y.S, Chen, M.H.
Deposit date:2021-05-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08757067 Å)
Cite:Structural and Mechanistic Bases for StnK3 and Its Mutant-Mediated Lewis-Acid-Dependent Epimerization and Retro-Aldol Reactions.
Acs Catalysis, 12, 2022
4Q38
DownloadVisualize
BU of 4q38 by Molmil
The crystal structure of acyltransferase in complex with decanoyl-CoA and teicoplanin
Descriptor: 2-amino-6-O-decanoyl-2-deoxy-beta-D-glucopyranose, COENZYME A, Putative uncharacterized protein tcp24, ...
Authors:Li, T.-L, Lyu, S.-Y, Liu, Y.-C, Chang, C.-Y, Huang, C.-J.
Deposit date:2014-04-11
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus
J.Am.Chem.Soc., 136, 2014
4Q36
DownloadVisualize
BU of 4q36 by Molmil
The crystal structure of acyltransferase in complex with octanoyl-CoA and teicoplanin
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose, OCTANOYL-COENZYME A, Putative uncharacterized protein tcp24, ...
Authors:Li, T.-L, Lyu, S.-Y, Liu, Y.-C, Chang, C.-Y, Huang, C.-J.
Deposit date:2014-04-11
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus
J.Am.Chem.Soc., 136, 2014
4NE0
DownloadVisualize
BU of 4ne0 by Molmil
Crystal structure of non-heme iron oxygenase OrfP D157A mutant in complex with (3S)-hydroxy-L-Arg
Descriptor: (2S,3S)-3-HYDROXYARGININE, FE (III) ION, L-arginine beta-hydroxylase, ...
Authors:Chang, C.Y, Liu, Y.C, Lyu, S.Y, Wu, C.C, Li, T.L.
Deposit date:2013-10-28
Release date:2014-06-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Biosynthesis of streptolidine involved two unexpected intermediates produced by a dihydroxylase and a cyclase through unusual mechanisms
Angew.Chem.Int.Ed.Engl., 53, 2014
6IIY
DownloadVisualize
BU of 6iiy by Molmil
Crystal structure of deacetylase triple mutant (Orf2*T) that involving in teicoplanin biosynthetic pathway
Descriptor: COBALT (II) ION, IMIDAZOLE, deacetylase
Authors:Li, T.L, Huang, C.M.
Deposit date:2018-10-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Teicoplanin Reprogrammed with the N-Acyl-Glucosamine Pharmacophore at the Penultimate Residue of Aglycone Acquires Broad-Spectrum Antimicrobial Activities Effectively Killing Gram-Positive and -Negative Pathogens.
Acs Infect Dis., 5, 2019
6IIX
DownloadVisualize
BU of 6iix by Molmil
The crystal structure of acyltransferase mutant, orf11*-W163A, in complex with octanoyl-CoA
Descriptor: OCTANOYL-COENZYME A, SULFATE ION, acyltransferase
Authors:Li, T.L, Huang, C.M.
Deposit date:2018-10-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Teicoplanin Reprogrammed with the N-Acyl-Glucosamine Pharmacophore at the Penultimate Residue of Aglycone Acquires Broad-Spectrum Antimicrobial Activities Effectively Killing Gram-Positive and -Negative Pathogens.
Acs Infect Dis., 5, 2019
7V4O
DownloadVisualize
BU of 7v4o by Molmil
Unique non-heme hydroxylase in biosynthesis of nucleoside antibiotic pathway uncover mechanism of reaction
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECANE, Beta-hydroxylase
Authors:Li, T.L, Saeid, M.Z.
Deposit date:2021-08-13
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:beta-Hydroxylation of alpha-amino-beta-hydroxylbutanoyl-glycyluridine catalyzed by a nonheme hydroxylase ensures the maturation of caprazamycin
Commun Chem, 5, 2022
4KIF
DownloadVisualize
BU of 4kif by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with phenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, 3-PHENYLPYRUVIC ACID, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4M2F
DownloadVisualize
BU of 4m2f by Molmil
Crystal structure of non-heme iron oxygenase OrfP in complex with Fe and L-canavanine
Descriptor: FE (III) ION, L-CANAVANINE, L-arginine beta-hydroxylase
Authors:Chang, C.Y, Liu, Y.C, Lyu, S.Y, Wu, C.C, Li, T.L.
Deposit date:2013-08-05
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Biosynthesis of streptolidine involved two unexpected intermediates produced by a dihydroxylase and a cyclase through unusual mechanisms.
Angew.Chem.Int.Ed.Engl., 53, 2014
7XQA
DownloadVisualize
BU of 7xqa by Molmil
Orf1-glycine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-07
Release date:2023-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
4KIG
DownloadVisualize
BU of 4kig by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with 4-hydroxyphenylpyruvic acid
Descriptor: (2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC ACID, 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4M6Y
DownloadVisualize
BU of 4m6y by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-homocysteine and methylphenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (3R)-2-oxo-3-phenylbutanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon