Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8FHF
DownloadVisualize
BU of 8fhf by Molmil
Crystal structure of PPARgamma ligand-binding domain in complex with ZINC5672437
Descriptor: N-(4-carbamoylphenyl)-2-chloro-5-nitrobenzamide, Peroxisome proliferator-activated receptor gamma, nonanoic acid
Authors:Shang, J, Kojetin, D.J.
Deposit date:2022-12-14
Release date:2024-03-20
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand efficacy shifts a nuclear receptor conformational ensemble between transcriptionally active and repressive states.
Nat Commun, 16, 2025
8FKE
DownloadVisualize
BU of 8fke by Molmil
Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR32904
Descriptor: 1,2-ETHANEDIOL, 2-chloro-N-(2-methylpyridin-4-yl)-5-nitrobenzamide, Nuclear receptor corepressor 1, ...
Authors:MacTavish, B.S, Kojetin, D.J.
Deposit date:2022-12-21
Release date:2024-04-17
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Ligand efficacy shifts a nuclear receptor conformational ensemble between transcriptionally active and repressive states.
Nat Commun, 16, 2025
6J02
DownloadVisualize
BU of 6j02 by Molmil
Crystal structure of the SRCR domain of mouse SCARA1
Descriptor: CALCIUM ION, Macrophage scavenger receptor types I and II
Authors:Cheng, C, Hu, Z.
Deposit date:2018-12-20
Release date:2019-11-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:The scavenger receptor SCARA1 (CD204) recognizes dead cells through spectrin.
J.Biol.Chem., 294, 2019
6J9A
DownloadVisualize
BU of 6j9a by Molmil
Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment
Descriptor: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.915 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J9C
DownloadVisualize
BU of 6j9c by Molmil
Crystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex
Descriptor: B3 domain-containing transcription factor LEC2, DNA (5'-D(*CP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J94
DownloadVisualize
BU of 6j94 by Molmil
Crystal structure of CYP97A3
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Protein LUTEIN DEFICIENT 5, chloroplastic
Authors:Niu, G, Guo, Q, Wang, J, Zhao, S.
Deposit date:2019-01-22
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structural basis for plant lutein biosynthesis from alpha-carotene.
Proc.Natl.Acad.Sci.USA, 117, 2020
6J95
DownloadVisualize
BU of 6j95 by Molmil
Crystal structure of CYP97A3 in complex with retinal
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Protein LUTEIN DEFICIENT 5, chloroplastic, ...
Authors:Niu, G, Guo, Q, Wang, J, Zhao, S.
Deposit date:2019-01-22
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis for plant lutein biosynthesis from alpha-carotene.
Proc.Natl.Acad.Sci.USA, 117, 2020
6JGF
DownloadVisualize
BU of 6jgf by Molmil
Crystal structure of Se-Met CadR from P. putida with a 21 residue C-terminal truncation
Descriptor: CadR, PHOSPHATE ION
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-13
Release date:2019-09-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JGV
DownloadVisualize
BU of 6jgv by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida
Descriptor: CadR
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-15
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JGW
DownloadVisualize
BU of 6jgw by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with DNA
Descriptor: CadR, DNA (27-MER)
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-15
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JNI
DownloadVisualize
BU of 6jni by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Zinc(II) and DNA
Descriptor: CadR, DNA (25-MER), ZINC ION
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-03-16
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
8HB9
DownloadVisualize
BU of 8hb9 by Molmil
Crystal Structure of Human IDH1 R132H Mutant in Complex with NADPH and Compound IHMT-IDH1-053
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Guo, G, Wang, B, Liu, J, Liu, Q.
Deposit date:2022-10-27
Release date:2023-05-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based discovery of IHMT-IDH1-053 as a potent irreversible IDH1 mutant selective inhibitor.
Eur.J.Med.Chem., 256, 2023
6J9B
DownloadVisualize
BU of 6j9b by Molmil
Arabidopsis FUS3-DNA complex
Descriptor: B3 domain-containing transcription factor FUS3, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
Authors:Hu, H, Du, J.
Deposit date:2019-01-22
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6JGX
DownloadVisualize
BU of 6jgx by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Cadmium(II) and DNA
Descriptor: CADMIUM ION, CadR, DNA (5'-D(*CP*AP*CP*CP*CP*TP*AP*TP*AP*GP*TP*GP*GP*CP*TP*AP*CP*AP*GP*GP*GP*T)-3'), ...
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-02-15
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
6L8I
DownloadVisualize
BU of 6l8i by Molmil
Crystal structure of CYP97A3 mutant S290D/W300L/S304V
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Protein LUTEIN DEFICIENT 5, chloroplastic
Authors:Niu, G, Guo, Q, Liu, L.
Deposit date:2019-11-06
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for plant lutein biosynthesis from alpha-carotene.
Proc.Natl.Acad.Sci.USA, 117, 2020
7W09
DownloadVisualize
BU of 7w09 by Molmil
UGT74AN2, Plant Steroid Glycosyltransferase
Descriptor: Glycosyltransferase
Authors:Wei, H, Feng, L.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W11
DownloadVisualize
BU of 7w11 by Molmil
glycosyltransferase
Descriptor: DIGITOXIGENIN, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE, ...
Authors:Wei, H, Feng, L.
Deposit date:2021-11-19
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W0Z
DownloadVisualize
BU of 7w0z by Molmil
Glycosyltranferase UGT74AN2
Descriptor: 5-[(1R,2S,4R,6R,7R,10S,11S,14S,16R)-14-hydroxy-7,11-dimethyl-3-oxapentacyclo[8.8.0.02,4.02,7.011,16]octadecan-6-yl]pyran-2-one, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Wei, H, Feng, L.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W1H
DownloadVisualize
BU of 7w1h by Molmil
glycosyltransferase
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Wei, H, Feng, L.
Deposit date:2021-11-19
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W10
DownloadVisualize
BU of 7w10 by Molmil
UGT74AN2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE, ...
Authors:Wei, H, Long, F.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W0K
DownloadVisualize
BU of 7w0k by Molmil
plant glycosyltransferase
Descriptor: GLYCEROL, Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Wei, H, Feng, L.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
7W1B
DownloadVisualize
BU of 7w1b by Molmil
Glycosyltransferase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIGITOXIGENIN, Glycosyltransferase, ...
Authors:Wei, H, Feng, L.
Deposit date:2021-11-19
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Functional and Structural Dissection of a Plant Steroid 3-O-Glycosyltransferase Facilitated the Engineering Enhancement of Sugar Donor Promiscuity
Acs Catalysis, 2022
8ZOJ
DownloadVisualize
BU of 8zoj by Molmil
The crystal structure of YegTK267A from the Nucleoside: H+ Symporter Family
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative nucleoside transporter YegT
Authors:Xiao, Q.J, Deng, D.
Deposit date:2024-05-28
Release date:2025-04-02
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Mechanistic insights into proton-coupled substrate translocation of nucleoside proton symporters.
J.Biol.Chem., 301, 2025
7ET5
DownloadVisualize
BU of 7et5 by Molmil
Crystal structure of Arabidopsis TEM1 AP2 domain
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, SULFATE ION
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.052 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET6
DownloadVisualize
BU of 7et6 by Molmil
Crystal structure of Arabidopsis TEM1 B3-DNA complex
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, FT-RY14-F, FT-RY14-R
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon