Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4Z5S
DownloadVisualize
BU of 4z5s by Molmil
Crystal structure of apo-form of aldehyde deformylating oxygenase from Synechocystis sp.PCC 6803
Descriptor: Aldehyde decarbonylase
Authors:Jia, C, Li, M, Chang, W.
Deposit date:2015-04-03
Release date:2016-04-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.582 Å)
Cite:Identification of residues important for the activity of aldehyde-deformylating oxygenase through investigation into the structure-activity relationship
BMC Biotechnol., 17, 2017
6IEA
DownloadVisualize
BU of 6iea by Molmil
Structure of RVFV Gn and human monoclonal antibody R13
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, NSmGnGc, ...
Authors:Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
Deposit date:2018-09-13
Release date:2019-04-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
6IEB
DownloadVisualize
BU of 6ieb by Molmil
Structure of RVFV Gn and human monoclonal antibody R15
Descriptor: NSmGnGc, R15 H chain, R15 L chain
Authors:Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
Deposit date:2018-09-13
Release date:2019-04-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.409 Å)
Cite:Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
6IEC
DownloadVisualize
BU of 6iec by Molmil
Structure of RVFV Gn and human monoclonal antibody R17
Descriptor: NSmGnGc, R17 H chain, R17 L chain
Authors:Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
Deposit date:2018-09-13
Release date:2019-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
6IEK
DownloadVisualize
BU of 6iek by Molmil
Structure of RVFV Gn and human monoclonal antibody R12
Descriptor: Heavy chain of Fab R12, Light chain of Fab R12, NSmGnGc
Authors:Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
Deposit date:2018-09-14
Release date:2019-04-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
8ZAX
DownloadVisualize
BU of 8zax by Molmil
Crystal structure of a short-chain dehydrogenase from Lactobacillus fermentum with NADPH
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SDR family oxidoreductase
Authors:Wang, J.J, Cong, L, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-04-25
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir
Adv.Synth.Catal., 2024
8YAV
DownloadVisualize
BU of 8yav by Molmil
Crystal structure of glucose 1-dehydrogenase from Limosilactobacillus fermentum
Descriptor: MAGNESIUM ION, SDR family oxidoreductase
Authors:Cong, L, Wang, J.J, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-02-10
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir.
Adv.Synth.Catal., n/a, 2024
8YAI
DownloadVisualize
BU of 8yai by Molmil
Crystal structure of glucose 1-dehydrogenase mutant1 from Limosilactobacillus fermentum
Descriptor: SDR family oxidoreductase
Authors:Cong, L, Wang, J.J, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-02-09
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir
Adv.Synth.Catal., 2024
9JA8
DownloadVisualize
BU of 9ja8 by Molmil
Crystal structure of human phosphodiesterase 10A in complex with N-(2-amino-2-thioxoethyl)-2-(3-(3-(dimethylcarbamoyl)-6-fluoroimidazo[1,2-a]pyridin-2-yl)azetidin-1-yl)quinoline-4-carboxamide
Descriptor: MAGNESIUM ION, ZINC ION, cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A, ...
Authors:Zhang, F.C, Huang, Y.Y, Luo, H.B, Guo, L.
Deposit date:2024-08-24
Release date:2025-01-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhalable Carbonyl Sulfide Donor-Hybridized Selective Phosphodiesterase 10A Inhibitor for Treating Idiopathic Pulmonary Fibrosis by Inhibiting Tumor Growth Factor-beta Signaling and Activating the cAMP/Protein Kinase A/cAMP Response Element-Binding Protein (CREB)/p53 Axis.
Acs Pharmacol Transl Sci, 8, 2025
8YAU
DownloadVisualize
BU of 8yau by Molmil
Crystal structure of glucose 1-dehydrogenase mutant2 from Limosilactobacillus fermentum
Descriptor: SDR family oxidoreductase
Authors:Cong, L, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-02-10
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir
Adv.Synth.Catal., 2024
7YOA
DownloadVisualize
BU of 7yoa by Molmil
High-resolution crystal structure of the mouse alpha-defensin cryptdin 14
Descriptor: Alpha-defensin 14, SULFATE ION
Authors:Yang, Y, Lu, W.
Deposit date:2022-08-01
Release date:2022-11-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Mouse alpha-Defensins: Structural and Functional Analysis of the 17 Cryptdin Isoforms Identified from a Single Jejunal Crypt.
Infect.Immun., 91, 2023
8XTZ
DownloadVisualize
BU of 8xtz by Molmil
Crystal structure of Lsd18 in complex with a substrate
Descriptor: (4R,5S)-4-methyl-5-phenyl-3-((2R,3S,4S,6E,10E)-2,6,10-triethyl-3-hydroxy-4-methyldodeca-6,10-dienoyl)oxazolidin-2-one, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Deng, Y.M, Hu, Y.L, Chen, X.
Deposit date:2024-01-12
Release date:2025-01-15
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis of Sequential Enantioselective Epoxidation by a Flavin-Dependent Monooxygenase in Lasalocid A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
8XU7
DownloadVisualize
BU of 8xu7 by Molmil
Crystal structure of Lsd18 in complex with a product
Descriptor: (4R,5S)-3-((2R,3S,4S)-2-ethyl-5-((2R,3R)-2-ethyl-3-(2-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)ethyl)oxiran-2-yl)-3-hydroxy-4-methylpentanoyl)-4-methyl-5-phenyloxazolidin-2-one, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Deng, Y.M, Chen, X.
Deposit date:2024-01-12
Release date:2025-01-15
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Sequential Enantioselective Epoxidation by a Flavin-Dependent Monooxygenase in Lasalocid A Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
4TW2
DownloadVisualize
BU of 4tw2 by Molmil
Crystal Structure of SCARB2 in Neural Condition (pH7.5)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Scavenger receptor class B member 2, ...
Authors:Dang, M.H, Wang, X.X, Rao, Z.H.
Deposit date:2014-06-29
Release date:2015-07-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.889 Å)
Cite:Molecular mechanism of SCARB2-mediated attachment and uncoating of EV71
Protein Cell, 5, 2014
4TXS
DownloadVisualize
BU of 4txs by Molmil
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
Descriptor: (4-hydroxyphenyl)acetonitrile, Polyprotein
Authors:Shui, W, Yang, C, Lin, J, Chen, X, Qin, S, Chen, S.
Deposit date:2014-07-07
Release date:2015-05-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline
Sci Rep, 5, 2015
4TY8
DownloadVisualize
BU of 4ty8 by Molmil
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline
Descriptor: 6-methyl-2H-chromen-2-one, Polyprotein
Authors:Shui, W, Yang, C, Lin, J, Chen, X, Qin, S, Chen, S.
Deposit date:2014-07-08
Release date:2015-05-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline
Sci Rep, 5, 2015
9KYQ
DownloadVisualize
BU of 9kyq by Molmil
GH57 family amylopullulanase from Aquifex aeolicus wild type co-crystallize with gama-cyclodextrin
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
Deposit date:2024-12-09
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9KYP
DownloadVisualize
BU of 9kyp by Molmil
GH57 family amylopullulanase from Aquifex aeolicus wild type complex with beta-cyclodextrin
Descriptor: 1,2-ETHANEDIOL, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), DI(HYDROXYETHYL)ETHER, ...
Authors:Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
Deposit date:2024-12-09
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9K7C
DownloadVisualize
BU of 9k7c by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with maltopentaose
Descriptor: GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-10-23
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structure of GH57 family amylopullulanase reveals its dual binding pockets sharing the same catalytic dyad.
Commun Biol, 8, 2025
9KYR
DownloadVisualize
BU of 9kyr by Molmil
GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with gama-cyclodextrin
Descriptor: 1,2-ETHANEDIOL, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), DI(HYDROXYETHYL)ETHER, ...
Authors:Zhu, Z.M, Wang, W.W, Yu, F, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S.
Deposit date:2024-12-09
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9K7D
DownloadVisualize
BU of 9k7d by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with Maltohexaose
Descriptor: Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-10-23
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of GH57 family amylopullulanase reveals its dual binding pockets sharing the same catalytic dyad.
Commun Biol, 8, 2025
9JLW
DownloadVisualize
BU of 9jlw by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant D352N in complex with maltoheptaose
Descriptor: GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-09-19
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024
9JLU
DownloadVisualize
BU of 9jlu by Molmil
GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with beta-cyclodextrin
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, Glycoside hydrolase family 57 N-terminal domain-containing protein
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-09-19
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Mechanistic insights into cyclodextrins as substrates and inhibitors of GH57 family amylopullulanase from Aquifex aeolicus.
J.Struct.Biol., 217, 2025
9JLR
DownloadVisualize
BU of 9jlr by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with maltopentaose
Descriptor: Glycoside hydrolase family 57 N-terminal domain-containing protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-09-19
Release date:2025-06-04
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024
9JLS
DownloadVisualize
BU of 9jls by Molmil
Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus wild type in complex with acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Glycoside hydrolase family 57 N-terminal domain-containing protein
Authors:Zhu, Z.M, Wang, W.W, Li, M.J, Xu, Q, Zhou, H, Huang, L.Q, Wang, Q.S, Yu, F.
Deposit date:2024-09-19
Release date:2025-06-04
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:High-Temperature Crystallization Method for the GH57 Family Hyperthermophilic Amylopullulanase from Aquifex aeolicus
Cryst.Growth Des., 24, 2024

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon