6LHN
| RLGSGG-AtPRT6 UBR box | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2019-12-09 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
|
|
7Y6W
| RRGSGG-AtPRT6 UBR box (I222) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7Y6Z
| RLGSGG-AtPRT6 UBR box (I222) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.598 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7XWE
| RRGSGG-AtPRT6 UBR box | Descriptor: | E3 ubiquitin-protein ligase PRT6, MAGNESIUM ION, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-05-26 | Release date: | 2023-05-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.598 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7XWG
| RSGSGG-AtPRT6 UBR box | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-05-26 | Release date: | 2023-05-31 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (1.832 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7XWF
| RLGSGG-AtPRT6 UBR box (highest resolution) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-05-26 | Release date: | 2023-05-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.451 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7Y70
| RLGSGG-AtPRT6 UBR box (P4332) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.801 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7XWD
| Apo-AtPRT6 UBR box | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-05-26 | Release date: | 2023-05-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.396 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7Y6Y
| RLGSGG-AtPRT6 UBR box (C121) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.543 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7Y6X
| RRGSGG-AtPRT6 UBR box (P32) | Descriptor: | E3 ubiquitin-protein ligase PRT6, ZINC ION | Authors: | Kim, L, Song, H.K. | Deposit date: | 2022-06-21 | Release date: | 2023-07-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.196 Å) | Cite: | Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance To Be Published
|
|
7FEQ
| Cryo-EM structure of apo BsClpP at pH 6.5 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
|
|
7FES
| Cryo-EM structure of apo BsClpP at pH 4.2 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
|
|
7FER
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
|
|
7FEP
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
|
|
5YSK
| SdeA mART-C domain EE/AA apo | Descriptor: | Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Method: | X-RAY DIFFRACTION (2.403 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
|
|
5YSI
| SdeA mART-C domain EE/AA NCA complex | Descriptor: | NICOTINAMIDE, Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Method: | X-RAY DIFFRACTION (1.546 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
|
|
5YSJ
| SdeA mART-C domain WT apo | Descriptor: | Ubiquitinating/deubiquitinating enzyme SdeA | Authors: | Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2017-11-14 | Release date: | 2018-08-29 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.059 Å) | Cite: | Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila J. Mol. Biol., 430, 2018
|
|
4I2S
| |
4I8M
| |
4I7I
| |
4I96
| |
4I1E
| |
4I3N
| |
4I37
| |
4I6I
| |