Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8Y37
DownloadVisualize
BU of 8y37 by Molmil
Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, 7-[4-[3-[[(1~{S},2~{R},5~{R},6~{S},7~{S},8~{R},9~{R},11~{R},13~{R},14~{R})-8-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-9-methoxy-1,5,7,9,11,13-hexamethyl-4,12,16-tris(oxidanylidene)-3,17-dioxa-15-azabicyclo[12.3.0]heptadecan-6-yl]oxycarbonylamino]propoxy]but-1-ynyl]-1-methyl-4-oxidanylidene-quinoline-3-carboxylic acid, ...
Authors:Li, Y, Lu, G, Li, J, Pei, X, Lin, J.
Deposit date:2024-01-28
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Synthetic macrolides overcoming MLS B K-resistant pathogens.
Cell Discov, 10, 2024
8Y36
DownloadVisualize
BU of 8y36 by Molmil
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, 7-[4-[3-[[(1~{S},2~{R},5~{R},6~{S},7~{S},8~{R},9~{R},11~{R},13~{R},14~{R})-8-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-9-methoxy-1,5,7,9,11,13-hexamethyl-4,12,16-tris(oxidanylidene)-3,17-dioxa-15-azabicyclo[12.3.0]heptadecan-6-yl]oxycarbonylamino]propoxy]but-1-ynyl]-1-methyl-4-oxidanylidene-quinoline-3-carboxylic acid, ...
Authors:Li, Y, Lu, G, Li, J, Pei, X, Lin, J.
Deposit date:2024-01-28
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Synthetic macrolides overcoming MLS B K-resistant pathogens.
Cell Discov, 10, 2024
2ERF
DownloadVisualize
BU of 2erf by Molmil
Crystal Structure of the Thrombospondin-1 N-terminal Domain at 1.45A Resolution
Descriptor: Thrombospondin-1
Authors:Tan, K, Wang, J, Lawler, J.
Deposit date:2005-10-24
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structures of the thrombospondin-1 N-terminal domain and its complex with a synthetic pentameric heparin.
Structure, 14, 2006
5BVT
DownloadVisualize
BU of 5bvt by Molmil
Palmitate-bound pFABP5
Descriptor: Epidermal fatty acid-binding protein, PALMITOLEIC ACID
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5BVS
DownloadVisualize
BU of 5bvs by Molmil
Linoleate-bound pFABP4
Descriptor: Fatty acid-binding protein, LINOLEIC ACID
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5BVQ
DownloadVisualize
BU of 5bvq by Molmil
Ligand-unbound pFABP4
Descriptor: fatty acid-binding protein
Authors:Lee, J.H, Lee, C.W, Do, H.
Deposit date:2015-06-05
Release date:2015-08-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5Z5K
DownloadVisualize
BU of 5z5k by Molmil
Structure of the DCC-Draxin complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Draxin, ...
Authors:Liu, Y, Xiao, J, Wang, J.
Deposit date:2018-01-18
Release date:2018-06-20
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structural Basis for Draxin-Modulated Axon Guidance and Fasciculation by Netrin-1 through DCC.
Neuron, 97, 2018
1ALY
DownloadVisualize
BU of 1aly by Molmil
CRYSTAL STRUCTURE OF HUMAN CD40 LIGAND
Descriptor: CD40 LIGAND
Authors:Karpusas, M, Hsu, Y.M, Thomas, D.
Deposit date:1997-06-05
Release date:1997-09-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:2 A crystal structure of an extracellular fragment of human CD40 ligand.
Structure, 3, 1995
4TVU
DownloadVisualize
BU of 4tvu by Molmil
Crystal structure of trehalose synthase from Deinococcus radiodurans reveals a closed conformation for catalysis of the intramolecular isomerization
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wang, Y.L, Chow, S.Y, Lin, Y.T, Liaw, S.H.
Deposit date:2014-06-28
Release date:2014-12-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization.
Acta Crystallogr.,Sect.D, 70, 2014
2OUJ
DownloadVisualize
BU of 2ouj by Molmil
The crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP8
Descriptor: Thrombospondin-1
Authors:Tan, K, Joachimiak, A, Wang, J, Lawler, J.
Deposit date:2007-02-11
Release date:2008-01-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain.
J.Biol.Chem., 283, 2008
4D90
DownloadVisualize
BU of 4d90 by Molmil
Crystal Structure of Del-1 EGF domains
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Chen, Q, Schurpf, T, Springer, T, Wang, J.
Deposit date:2012-01-11
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:The RGD finger of Del-1 is a unique structural feature critical for integrin binding.
Faseb J., 26, 2012
2OUH
DownloadVisualize
BU of 2ouh by Molmil
Crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP10
Descriptor: SULFATE ION, Thrombospondin-1
Authors:Tan, K, Joachimiak, A, Wang, J, Lawler, J.
Deposit date:2007-02-11
Release date:2008-01-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain.
J.Biol.Chem., 283, 2008
6BZ3
DownloadVisualize
BU of 6bz3 by Molmil
Complex structure of FAK FAT domain and DCC P3 motif
Descriptor: CALCIUM ION, Focal adhesion kinase 1, Netrin receptor DCC
Authors:Xu, S, Wang, J.-H.
Deposit date:2017-12-22
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:The binding of DCC-P3 motif and FAK-FAT domain mediates the initial step of netrin-1/DCC signaling for axon attraction.
Cell Discov, 4, 2018
5Y0I
DownloadVisualize
BU of 5y0i by Molmil
Solution structure of arenicin-3 derivative N1
Descriptor: NZ17074(N1)
Authors:Liu, X.H, Wang, J.H.
Deposit date:2017-07-17
Release date:2017-07-26
Method:SOLUTION NMR
Cite:Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis
Sci Rep, 7, 2017
5V5M
DownloadVisualize
BU of 5v5m by Molmil
Crystal structure of HLA-B*5701 complex with HIV-1 gag derived peptide TW10
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-57 alpha chain, ...
Authors:Li, X, Wang, J.-H.
Deposit date:2017-03-14
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.878 Å)
Cite:Crystal structure of HLA-B*5801 with a TW10 HIV Gag epitope reveals a novel mode of peptide presentation.
Cell. Mol. Immunol., 14, 2017
5Y0H
DownloadVisualize
BU of 5y0h by Molmil
Solution structure of arenicin-3 derivative N6
Descriptor: N6
Authors:Liu, X.H, Wang, J.H.
Deposit date:2017-07-17
Release date:2017-07-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis
Sci Rep, 7, 2017
5Y0J
DownloadVisualize
BU of 5y0j by Molmil
Solution structure of arenicin-3 derivative N2
Descriptor: N2
Authors:Liu, X.H, Wang, J.H.
Deposit date:2017-07-17
Release date:2017-07-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis
Sci Rep, 7, 2017
6BAO
DownloadVisualize
BU of 6bao by Molmil
Stigmatella aurantiaca phytochrome photosensory core module, wild type
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-14
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
6BAK
DownloadVisualize
BU of 6bak by Molmil
The structure of the Stigmatella aurantiaca phytochrome chromophore binding domain T289H mutant
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-13
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
5V5L
DownloadVisualize
BU of 5v5l by Molmil
Crystal structure of HLA-B*5801 complex with HIV-1 gag derived peptide TW10
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-58 alpha chain, ...
Authors:Li, X, Wang, J.-H.
Deposit date:2017-03-14
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of HLA-B*5801 with a TW10 HIV Gag epitope reveals a novel mode of peptide presentation.
Cell. Mol. Immunol., 14, 2017
6BAF
DownloadVisualize
BU of 6baf by Molmil
Structure of the chromophore binding domain of Stigmatella aurantiaca phytochrome P1, wild-type
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-12
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
6BAP
DownloadVisualize
BU of 6bap by Molmil
Stigmatella aurantiaca bacterial phytochrome PAS-GAF-PHY, T289H mutant
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-14
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
6BAY
DownloadVisualize
BU of 6bay by Molmil
Stigmatella aurantiaca bacterial phytochrome P1, PAS-GAF-PHY T289H mutant, room temperature structure
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-16
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
4R1N
DownloadVisualize
BU of 4r1n by Molmil
Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum.
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, E.J, Kim, S.W, Kim, K.J.
Deposit date:2014-08-07
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase from Clostridium butyricum and its mutations that enhance reaction kinetics
J MICROBIOL BIOTECHNOL., 24, 2014
5IM7
DownloadVisualize
BU of 5im7 by Molmil
Crystal structure of HLA-B5801, a protective HLA allele for HIV-1 infection
Descriptor: Beta-2-microglobulin, GLN-ALA-SER-GLN-GLU-VAL-LYS-ASN-TRP, HLA-B*58:01 Heavy Chain
Authors:Li, X, Wang, J.-H.
Deposit date:2016-03-05
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Crystal structure of HLA-B*5801, a protective HLA allele for HIV-1 infection.
Protein Cell, 7, 2016

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon