Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8V09
DownloadVisualize
BU of 8v09 by Molmil
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by bayesian inference with PGH
Descriptor: ACETIC ACID, FORMIC ACID, PHOSPHOGLYCOLOHYDROXAMIC ACID, ...
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2023-11-17
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
8V2W
DownloadVisualize
BU of 8v2w by Molmil
Crystal Structure of the ancestral triosephosphate isomerase reconstruction of the last opisthokont common ancestor obtained by Bayesian inference
Descriptor: GLYCEROL, Triosephosphate isomerase
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra, Y, Fernandez-Velasco, D.A.
Deposit date:2023-11-24
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
4G05
DownloadVisualize
BU of 4g05 by Molmil
The crystal structures of several mutants of Pleurotus eryngii versatile peroxidase
Descriptor: CALCIUM ION, Guaiacol, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mate, M.J, Romero, A, Ruiz-Duenas, F.J, Martinez, A.T.
Deposit date:2012-07-09
Release date:2012-10-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Two Oxidation Sites for Low Redox Potential Substrates: A DIRECTED MUTAGENESIS, KINETIC, AND CRYSTALLOGRAPHIC STUDY ON PLEUROTUS ERYNGII VERSATILE PEROXIDASE.
J.Biol.Chem., 287, 2012
6NEE
DownloadVisualize
BU of 6nee by Molmil
Crystal structure of a reconstructed ancestor of Triosephosphate isomerase from eukaryotes
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Rodriguez-Romero, A, Schulte-Sasse, M, Fernandez-Velasco, D.A.
Deposit date:2018-12-17
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural, thermodynamic and catalytic characterization of an ancestral triosephosphate isomerase reveal early evolutionary coupling between monomer association and function.
FEBS J., 286, 2019
8W05
DownloadVisualize
BU of 8w05 by Molmil
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Descriptor: Triosephosphate isomerase
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2024-02-13
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
8W08
DownloadVisualize
BU of 8w08 by Molmil
Crystal Structure of the worst case reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Descriptor: FLUORIDE ION, Triosephosphate isomerase
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2024-02-13
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
8W06
DownloadVisualize
BU of 8w06 by Molmil
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood with PGH
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ACETIC ACID, ...
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2024-02-13
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
4FCN
DownloadVisualize
BU of 4fcn by Molmil
The crystal structures of several mutants of pleurotus eryngii versatile peroxidase
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Mate, M.J, Romero, A, Ruiz-Duenas, F.J, Martinez, A.T.
Deposit date:2012-05-25
Release date:2012-10-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Oxidation Sites for Low Redox Potential Substrates: A DIRECTED MUTAGENESIS, KINETIC, AND CRYSTALLOGRAPHIC STUDY ON PLEUROTUS ERYNGII VERSATILE PEROXIDASE.
J.Biol.Chem., 287, 2012
3G4P
DownloadVisualize
BU of 3g4p by Molmil
OXA-24 beta-lactamase at pH 7.5
Descriptor: Beta-lactamase OXA-24
Authors:Santillana, E, Romero, A.
Deposit date:2009-02-04
Release date:2010-02-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase
J.Am.Chem.Soc., 132, 2010
4FCS
DownloadVisualize
BU of 4fcs by Molmil
The crystal structures of several mutants of pleurotus eryngii versatile peroxidase
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mate, M.J, Romero, A, Ruiz-Duenas, F.J, Martinez, A.T.
Deposit date:2012-05-25
Release date:2012-10-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Two Oxidation Sites for Low Redox Potential Substrates: A DIRECTED MUTAGENESIS, KINETIC, AND CRYSTALLOGRAPHIC STUDY ON PLEUROTUS ERYNGII VERSATILE PEROXIDASE.
J.Biol.Chem., 287, 2012
3Q3U
DownloadVisualize
BU of 3q3u by Molmil
Trametes cervina lignin peroxidase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Calvino, F.R, Romero, A, Miki, Y, Martinez, A.T.
Deposit date:2010-12-22
Release date:2011-03-02
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic, kinetic, and spectroscopic study of the first ligninolytic peroxidase presenting a catalytic tyrosine.
J.Biol.Chem., 286, 2011
4GNY
DownloadVisualize
BU of 4gny by Molmil
Bovine beta-lactoglobulin complex with dodecyl sulfate
Descriptor: Beta-lactoglobulin, DODECYL SULFATE, GLYCEROL
Authors:Gutierrez-Magdaleno, G, Torres-Rivera, A, Garcia-Hernandez, E, Rodriguez-Romero, A.
Deposit date:2012-08-17
Release date:2013-02-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6367 Å)
Cite:Ligand-binding and self-association cooperativity of beta-lactoglobulin
J.Mol.Recognit., 26, 2013
4FDQ
DownloadVisualize
BU of 4fdq by Molmil
The crystal structures of several mutants of pleurotus eryngii versatile peroxidase
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mate, M.J, Romero, A, Ruiz-Duenas, F.J, Martinez, A.T.
Deposit date:2012-05-29
Release date:2012-10-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two Oxidation Sites for Low Redox Potential Substrates: A DIRECTED MUTAGENESIS, KINETIC, AND CRYSTALLOGRAPHIC STUDY ON PLEUROTUS ERYNGII VERSATILE PEROXIDASE.
J.Biol.Chem., 287, 2012
4FEF
DownloadVisualize
BU of 4fef by Molmil
The crystal structures of several mutants of pleurotus eryngii versatile peroxidase
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mate, M.J, Romero, A, Ruiz-Duenas, F.J, Martinez, A.T.
Deposit date:2012-05-30
Release date:2012-10-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Oxidation Sites for Low Redox Potential Substrates: A DIRECTED MUTAGENESIS, KINETIC, AND CRYSTALLOGRAPHIC STUDY ON PLEUROTUS ERYNGII VERSATILE PEROXIDASE.
J.Biol.Chem., 287, 2012
5VIZ
DownloadVisualize
BU of 5viz by Molmil
X-Ray structure of Insulin Glargine
Descriptor: Insulin, chain alpha, chain beta
Authors:Reyes-Grajeda, J.P, Romero, A.
Deposit date:2017-04-17
Release date:2017-10-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-Ray structure of Insulin Glargine
To Be Published
3LSD
DownloadVisualize
BU of 3lsd by Molmil
N-Domain of human adhesion/growth-regulatory galectin-9
Descriptor: Galectin-9
Authors:Ruiz, F.M, Romero, A.
Deposit date:2010-02-12
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:N-domain of human adhesion/growth-regulatory galectin-9: preference for distinct conformers and non-sialylated N-glycans and detection of ligand-induced structural changes in crystal and solution.
Int.J.Biochem.Cell Biol., 42, 2010
3LSE
DownloadVisualize
BU of 3lse by Molmil
N-Domain of human adhesion/growth-regulatory galectin-9 in complex with lactose
Descriptor: Galectin-9, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ruiz, F.M, Romero, A.
Deposit date:2010-02-12
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:N-domain of human adhesion/growth-regulatory galectin-9: preference for distinct conformers and non-sialylated N-glycans and detection of ligand-induced structural changes in crystal and solution.
Int.J.Biochem.Cell Biol., 42, 2010
3FV7
DownloadVisualize
BU of 3fv7 by Molmil
OXA-24 beta-lactamase complex with SA4-44 inhibitor
Descriptor: (2S)-2-[[2-methanoyl-7-(methoxycarbonylamino)indolizin-3-yl]amino]-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24
Authors:Bou, G, Santillana, E, Sheri, A, Beceiro, A, Sampson, J.M, Kalp, M, Bethel, C.R, Distler, A.M, Drawz, S.M, Pagadala, S.R, Van den Akker, F, Bonomo, R.A, Romero, A, Buynak, J.D.
Deposit date:2009-01-15
Release date:2010-02-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
4WP4
DownloadVisualize
BU of 4wp4 by Molmil
Hev b 6.02 (hevein) extracted from surgical gloves
Descriptor: Pro-hevein, THIOUREA
Authors:Galicia, C, Rodriguez-Romero, A.
Deposit date:2014-10-17
Release date:2015-03-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Impact of the vulcanization process on the structural characteristics and IgE recognition of two allergens, Hev b 2 and Hev b 6.02, extracted from latex surgical gloves.
Mol.Immunol., 65, 2015
2W23
DownloadVisualize
BU of 2w23 by Molmil
Structure of mutant W169Y of Pleurotus eryngii versatile peroxidase (VP)
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ruiz-Duenas, F.J, Pogni, R, Morales, M, Giansanti, S, Mate, M.J, Romero, A, Martinez, M.J, Basosi, R, Martinez, A.T.
Deposit date:2008-10-23
Release date:2009-01-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Protein Radicals in Fungal Versatile Peroxidase: Catalytic Tryptophan Radical in Both Compound I and Compound II and Studies on W164Y, W164H, and W164S Variants.
J.Biol.Chem., 284, 2009
5ANH
DownloadVisualize
BU of 5anh by Molmil
CRYSTAL STRUCTURE OF LACCASE FROM BASIDIOMYCETE PM1 (CECT 2971)
Descriptor: COPPER (II) ION, LACCASE, SULFATE ION
Authors:Medrano, F.J, Romero, A.
Deposit date:2015-09-07
Release date:2016-08-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:Re-Designing the Substrate Binding Pocket of Laccase for Enhanced Oxidation of Sinapic Acid
Catal.Sci..Technol, 6, 2016
5ABN
DownloadVisualize
BU of 5abn by Molmil
CRYSTAL STRUCTURE ANALYSIS OF FUNGAL VERSATILE PEROXIDASE FROM PLEUROTUS ERYNGII. MUTANT VPi. MUTATED RESIDUES D69S, T70D, S86E, D146T, Q202L, H232E, Q239R AND S301K.
Descriptor: CALCIUM ION, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2015-08-07
Release date:2015-11-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Improving the Ph-Stability of Versatile Peroxidase by Comparative Structural Analysis with a Naturally-Stable Manganese Peroxidase.
Plos One, 10, 2015
1GVM
DownloadVisualize
BU of 1gvm by Molmil
CHOLINE BINDING DOMAIN OF THE MAJOR AUTOLYSIN (C-LYTA) FROM STREPTOCOCCUS PNEUMONIAE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AUTOLYSIN, CHOLINE ION, ...
Authors:Fernandez-Tornero, C, Lopez, R, Garcia, E, Gimenez-Gallego, G, Romero, A.
Deposit date:2002-02-15
Release date:2002-08-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Two New Crystal Forms of the Choline-Binding Domain of the Major Pneumococcal Autolysin: Insights Into the Dynamics of the Active Dimeric
J.Mol.Biol., 321, 2002
2XUS
DownloadVisualize
BU of 2xus by Molmil
Crystal Structure of the BRMS1 N-terminal region
Descriptor: BREAST CANCER METASTASIS-SUPPRESSOR 1, CHLORIDE ION, SULFATE ION
Authors:Spinola-Amilibia, M, Rivera, J, Ortiz-Lombardia, M, Romero, A, Neira, J.L, Bravo, J.
Deposit date:2010-10-20
Release date:2011-07-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:The Structure of Brms1 Nuclear Export Signal and Snx6 Interacting Region Reveals a Hexamer Formed by Antiparallel Coiled Coils.
J.Mol.Biol., 411, 2011
1H8P
DownloadVisualize
BU of 1h8p by Molmil
Bull seminal plasma PDC-109 fibronectin type II module
Descriptor: PHOSPHOCHOLINE, SEMINAL PLASMA PROTEIN PDC-109
Authors:Wah, D.A, Fernandez-Tornero, C, Calvete, J.J, Romero, A.
Deposit date:2001-02-14
Release date:2002-04-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Sperm Coating Mechanism from the 1.8 A Crystal Structure of Pdc-109-Phosphorylcholine Complex
Structure, 10, 2002

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon