1AUR
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1AUO
| CARBOXYLESTERASE FROM PSEUDOMONAS FLUORESCENS | Descriptor: | CARBOXYLESTERASE | Authors: | Kim, K.K, Song, H.K, Suh, S.W. | Deposit date: | 1997-09-01 | Release date: | 1998-03-04 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of carboxylesterase from Pseudomonas fluorescens, an alpha/beta hydrolase with broad substrate specificity. Structure, 5, 1997
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1DO2
| TRIGONAL CRYSTAL FORM OF HEAT SHOCK LOCUS U (HSLU) FROM ESCHERICHIA COLI | Descriptor: | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (HEAT SHOCK LOCUS U) | Authors: | Bochtler, M, Hartmann, C, Song, H.K, Bourenkov, G.P, Bartunik, H.D. | Deposit date: | 1999-12-18 | Release date: | 2000-02-18 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (4 Å) | Cite: | The structures of HsIU and the ATP-dependent protease HsIU-HsIV. Nature, 403, 2000
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1DO0
| ORTHORHOMBIC CRYSTAL FORM OF HEAT SHOCK LOCUS U (HSLU) FROM ESCHERICHIA COLI | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PROTEIN (HEAT SHOCK LOCUS U), ... | Authors: | Bochtler, M, Hartmann, C, Song, H.K, Bourenkov, G.P, Bartunik, H.D. | Deposit date: | 1999-12-18 | Release date: | 2000-02-18 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | The structures of HsIU and the ATP-dependent protease HsIU-HsIV. Nature, 403, 2000
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1EW4
| CRYSTAL STRUCTURE OF ESCHERICHIA COLI CYAY PROTEIN REVEALS A NOVEL FOLD FOR THE FRATAXIN FAMILY | Descriptor: | CYAY PROTEIN | Authors: | Suh, S.W, Cho, S, Lee, M.G, Yang, J.K, Lee, J.Y, Song, H.K. | Deposit date: | 2000-04-22 | Release date: | 2000-08-09 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of Escherichia coli CyaY protein reveals a previously unidentified fold for the evolutionarily conserved frataxin family. Proc.Natl.Acad.Sci.USA, 97, 2000
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5HZY
| Crystal structure of the legionella pneumophila effector protein RavZ - P6322 | Descriptor: | Uncharacterized protein RavZ | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | Deposit date: | 2016-02-03 | Release date: | 2016-11-09 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.548 Å) | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane Autophagy, 13, 2017
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5IO3
| Crystal structure of the legionella pneumophila effector protein RavZ - I422 | Descriptor: | Uncharacterized protein RavZ | Authors: | Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K. | Deposit date: | 2016-03-08 | Release date: | 2016-11-09 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.74 Å) | Cite: | The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane Autophagy, 13, 2017
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5BZ6
| Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme | Descriptor: | Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION | Authors: | Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H. | Deposit date: | 2015-06-11 | Release date: | 2015-09-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter. Embo Rep., 16, 2015
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6ICO
| Pseudomonas putida CBB5 NdmA with theophylline | Descriptor: | COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICL
| Pseudomonas putida CBB5 NdmB | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICP
| Pseudomonas putida CBB5 NdmA QL mutant with caffeine | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6KHZ
| p62/SQSTM1 ZZ domain with Gly-peptide | Descriptor: | Sequestosome-1, ZINC ION | Authors: | Kwon, D.H, Kim, L, Song, H.K. | Deposit date: | 2019-07-16 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
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6KGI
| RLGS-yUbr1 Ubr box | Descriptor: | E3 ubiquitin-protein ligase UBR1, ZINC ION | Authors: | Heo, J, Kwon, D.H, Kim, L, Song, H.K. | Deposit date: | 2019-07-11 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.04 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
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6ICK
| Pseudomonas putida CBB5 NdmA | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICM
| Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.961 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICN
| Pseudomonas putida CBB5 NdmA with caffeine | Descriptor: | CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICQ
| Pseudomonas putida CBB5 NdmA QL mutant with theobromine | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6KGJ
| M1Q-hNTAQ1 C28S | Descriptor: | Protein N-terminal glutamine amidohydrolase | Authors: | Park, M.R, Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2019-07-11 | Release date: | 2020-01-22 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway. J.Biol.Chem., 295, 2020
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7D34
| AtClpS1-peptide complex | Descriptor: | ACETIC ACID, ALANINE, ATP-dependent Clp protease adapter protein CLPS1, ... | Authors: | Heo, J, Kim, L, Kwon, D.H, Song, H.K. | Deposit date: | 2020-09-18 | Release date: | 2021-04-28 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.007 Å) | Cite: | Structural basis for the N-degron specificity of ClpS1 from Arabidopsis thaliana. Protein Sci., 30, 2021
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7FER
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FEP
| Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5 | Descriptor: | ADEP1, ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FES
| Cryo-EM structure of apo BsClpP at pH 4.2 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7FEQ
| Cryo-EM structure of apo BsClpP at pH 6.5 | Descriptor: | ATP-dependent Clp protease proteolytic subunit | Authors: | Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K. | Deposit date: | 2021-07-21 | Release date: | 2022-07-06 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis. Embo J., 41, 2022
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7XV2
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-05-20 | Release date: | 2023-05-24 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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7XZ1
| TRIM E3 ubiquitin ligase | Descriptor: | Tripartite motif-containing protein 72, ZINC ION | Authors: | Park, S.H, Song, H.K. | Deposit date: | 2022-06-02 | Release date: | 2023-07-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (5.2 Å) | Cite: | Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane. Nat.Struct.Mol.Biol., 30, 2023
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