Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2P2W
DownloadVisualize
BU of 2p2w by Molmil
Crystal structure of citrate synthase from Thermotoga maritima MSB8
Descriptor: CITRATE ANION, Citrate synthase
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-07
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of citrate synthase from Thermotoga maritima MSB8
To be Published
2P6M
DownloadVisualize
BU of 2p6m by Molmil
Crystal structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL, SODIUM ION
Authors:Sugahara, M, Matsuura, Y, Morikawa, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-19
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
3WE6
DownloadVisualize
BU of 3we6 by Molmil
Crystal structure of anti-Prostaglandin E2 Fab fragment
Descriptor: ISOPROPYL ALCOHOL, mAb Fab H fragment, mAb Fab L fragment
Authors:Sugahara, M, Ago, H, Saino, H, Miyano, M.
Deposit date:2013-07-01
Release date:2014-07-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WFH
DownloadVisualize
BU of 3wfh by Molmil
Crystal structure of anti-Prostaglandin E2 Fab fragment PGE2 complex
Descriptor: (Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid, mAb Fab H fragment, mAb Fab L fragment
Authors:Sugahara, M, Ago, H, Saino, H, Miyano, M.
Deposit date:2013-07-19
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WIF
DownloadVisualize
BU of 3wif by Molmil
Crystal structure of anti-prostaglandin E2 Fab fragment 9Cl-PGF2beta complex
Descriptor: (Z)-7-[(1R,2R,3R,5R)-5-chloranyl-3-oxidanyl-2-[(E,3S)-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid, mAb Fab H fragment, mAb Fab L fragment
Authors:Sugahara, M, Ago, H, Saino, H, Miyano, M.
Deposit date:2013-09-12
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3VVI
DownloadVisualize
BU of 3vvi by Molmil
Crystal structure of the coiled-coil domain of the transient receptor potential channel from Gibberella zeae (TRPGz)
Descriptor: ACETATE ION, Non selective cation channel homologous to TRP channel
Authors:Ihara, M, Yamashita, A.
Deposit date:2012-07-25
Release date:2013-04-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular bases of multimodal regulation of a fungal transient receptor potential (TRP) channel
J.Biol.Chem., 288, 2013
3WHX
DownloadVisualize
BU of 3whx by Molmil
Crystal structure of anti-prostaglandin E2 Fab fragment PGE1 complex
Descriptor: 7-[(1R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid, mAb Fab H fragment, mAb Fab L fragment
Authors:Sugahara, M, Ago, H, Saino, H, Miyano, M.
Deposit date:2013-09-03
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WUN
DownloadVisualize
BU of 3wun by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nango, E, Suzuki, M.
Deposit date:2014-04-28
Release date:2015-05-27
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of hen egg-white lysozyme
To be Published
2ZBN
DownloadVisualize
BU of 2zbn by Molmil
Crystal structure of PH1033 from Pyrococcus horikoshii OT3
Descriptor: UPF0310 protein PH1033
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-26
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites.
Acta Crystallogr.,Sect.D, 64, 2008
3VX0
DownloadVisualize
BU of 3vx0 by Molmil
Crystal Structure of alpha-amylase from Aspergillus oryzae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase A type-1/2, CALCIUM ION, ...
Authors:Sugahara, M.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of alpha-amylase from Aspergillus oryzae
To be Published
3AKP
DownloadVisualize
BU of 3akp by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: GLYCEROL, xylanase
Authors:Sugahara, M, Kunishima, N.
Deposit date:2010-07-15
Release date:2011-06-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
3VX1
DownloadVisualize
BU of 3vx1 by Molmil
Crystal Structure of alpha-Amylase from Aspergillus oryzae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase A type-1/2, CALCIUM ION
Authors:Sugahara, M.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of alpha-Amylase from Aspergillus oryzae
To be Published
3AKR
DownloadVisualize
BU of 3akr by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: GLYCEROL, SODIUM ION, xylanase
Authors:Sugahara, M, Kunishima, N.
Deposit date:2010-07-15
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
3AKS
DownloadVisualize
BU of 3aks by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: GLYCEROL, SODIUM ION, xylanase
Authors:Sugahara, M, Kunishima, N.
Deposit date:2010-07-15
Release date:2011-06-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
3AKT
DownloadVisualize
BU of 3akt by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: GLYCEROL, xylanase
Authors:Sugahara, M, Kunishima, N.
Deposit date:2010-07-15
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
3AKQ
DownloadVisualize
BU of 3akq by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: CHLORIDE ION, ZINC ION, xylanase
Authors:Sugahara, M, Kunishima, N.
Deposit date:2010-07-15
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
8YHR
DownloadVisualize
BU of 8yhr by Molmil
DHODH in complex with furocoumavirin
Descriptor: 4-methyl-8-[(S)-oxidanyl(phenyl)methyl]-9-phenyl-furo[2,3-h]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
Authors:Hara, K, Okumura, H, Nakahara, M, Sato, M, Hashimoto, H, Osada, H, Watanabe, K.
Deposit date:2024-02-28
Release date:2024-05-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Analyses of Inhibition of Human Dihydroorotate Dehydrogenase by Antiviral Furocoumavirin.
Biochemistry, 63, 2024
7X85
DownloadVisualize
BU of 7x85 by Molmil
Crystal structure of chicken CENP-C Cupin domain
Descriptor: CENP-C, CITRIC ACID, GLYCEROL
Authors:Ariyoshi, M, Hara, M, Fukagawa, T.
Deposit date:2022-03-11
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.639 Å)
Cite:Centromere/kinetochore is assembled through CENP-C oligomerization.
Mol.Cell, 83, 2023
4W4Q
DownloadVisualize
BU of 4w4q by Molmil
Glucose isomerase structure determined by serial femtosecond crystallography at SACLA
Descriptor: CALCIUM ION, Xylose isomerase
Authors:Nango, E, Tanaka, T, Sugahara, M, Suzuki, M, Iwata, S.
Deposit date:2014-08-15
Release date:2014-11-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
1WM6
DownloadVisualize
BU of 1wm6 by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, phenylacetic acid degradation protein PaaI
Authors:Sugahara, M, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-04
Release date:2005-07-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
4YOP
DownloadVisualize
BU of 4yop by Molmil
CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nakane, T, Suzuki, M, Nango, E.
Deposit date:2015-03-12
Release date:2015-12-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Native sulfur/chlorine SAD phasing for serial femtosecond crystallography
Acta Crystallogr.,Sect.D, 71, 2015
5WR8
DownloadVisualize
BU of 5wr8 by Molmil
Thaumatin structure determined by SACLA at 1.55 Angstrom
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Masuda, T, Suzuki, M, Inoue, S, Sugahara, M.
Deposit date:2016-12-01
Release date:2017-11-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
7DJI
DownloadVisualize
BU of 7dji by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
Authors:Ihara, M, Matsuda, K.
Deposit date:2020-11-20
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors.
Mol.Pharmacol., 2023
5AVK
DownloadVisualize
BU of 5avk by Molmil
Crystal structure of proteinase K from Engyodontium album
Descriptor: GLYCEROL, NITRATE ION, PRASEODYMIUM ION, ...
Authors:Sugahara, M, Numata, K.
Deposit date:2015-06-17
Release date:2016-07-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Derivatization of Proteinase K with Heavy Atoms Enhances Its Thermal Stability.
Acs Catalysis, 6, 2016
5AVJ
DownloadVisualize
BU of 5avj by Molmil
Crystal structure of proteinase K from Engyodontium album
Descriptor: CALCIUM ION, GLYCEROL, NITRATE ION, ...
Authors:Sugahara, M, Numata, K.
Deposit date:2015-06-17
Release date:2016-07-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Derivatization of Proteinase K with Heavy Atoms Enhances Its Thermal Stability.
Acs Catalysis, 6, 2016

223166

数据于2024-07-31公开中

PDB statisticsPDBj update infoContact PDBjnumon