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3HVS
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BU of 3hvs by Molmil
Escherichia coli Thiol peroxidase (Tpx) wild type disulfide form
Descriptor: CITRIC ACID, Thiol peroxidase
Authors:Hall, A, Karplus, P.A.
Deposit date:2009-06-16
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural changes common to catalysis in the Tpx peroxiredoxin subfamily.
J.Mol.Biol., 393, 2009
6MAV
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BU of 6mav by Molmil
Complex of tissue inhibitor of metalloproteinase-1 (TIMP-1) mutant L34G with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
Descriptor: CALCIUM ION, Metalloproteinase inhibitor 1, Stromelysin-1, ...
Authors:Raeeszadeh-Sarmazdeh, M, Radisky, E.
Deposit date:2018-08-28
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Directed evolution of the metalloproteinase inhibitor TIMP-1 reveals that its N- and C-terminal domains cooperate in matrix metalloproteinase recognition.
J.Biol.Chem., 294, 2019
6M7G
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BU of 6m7g by Molmil
Crystal structure of ArsN, N-acetyltransferase with substrate phosphinothricin from Pseudomonas putida KT2440
Descriptor: PHOSPHINOTHRICIN, Phosphinothricin N-acetyltransferase
Authors:Venkadesh, S, Dheeman, D.S, Yoshinaga, M, Kandavelu, P, Rosen, B.P.
Deposit date:2018-08-20
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.657 Å)
Cite:Arsinothricin, an arsenic-containing non-proteinogenic amino acid analog of glutamate, is a broad-spectrum antibiotic.
Commun Biol, 2, 2019
5VX9
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BU of 5vx9 by Molmil
VP8* of P[6] Human Rotavirus RV3 in complex with LNFP1
Descriptor: Outer capsid protein VP4, SULFATE ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5WPH
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BU of 5wph by Molmil
Crystal structure of ArsN, N-acetyltransferase with substrate AST from Pseudomonas putida KT2440
Descriptor: (2S)-2-amino-4-[hydroxy(methyl)arsoryl]butanoic acid, Phosphinothricin N-acetyltransferase, SODIUM ION
Authors:Venkadesh, S, Dheeman, D.S, Yoshinaga, M, Kandavelu, P, Rosen, B.P.
Deposit date:2017-08-04
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Arsinothricin, an arsenic-containing non-proteinogenic amino acid analog of glutamate, is a broad-spectrum antibiotic.
Commun Biol, 2, 2019
5VX4
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BU of 5vx4 by Molmil
VP8* of a G2P[4] Human Rotavirus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
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BU of 5vx8 by Molmil
VP8* of P[6] Human Rotavirus RV3
Descriptor: Outer capsid protein VP4, SULFATE ION
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX5
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BU of 5vx5 by Molmil
VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
Descriptor: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.285 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
8SZZ
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BU of 8szz by Molmil
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Descriptor: O32-ZL4 Component A, O32-ZL4 Component B, SODIUM ION
Authors:Weidle, C, Borst, A.
Deposit date:2023-05-30
Release date:2023-11-01
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Accurate computational design of three-dimensional protein crystals.
Nat Mater, 22, 2023
8G9J
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BU of 8g9j by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR1
Authors:Huddy, T, Bera, A.K, Baker, D.
Deposit date:2023-02-21
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8G9K
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BU of 8g9k by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR2
Authors:Bera, A.K, Huddy, T, Baker, D, Kang, A.
Deposit date:2023-02-21
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8GA6
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BU of 8ga6 by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR6
Authors:Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:2023-02-22
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8GA7
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BU of 8ga7 by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR5
Authors:Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:2023-02-22
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8GEL
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BU of 8gel by Molmil
Cryo-EM structure of synthetic tetrameric building block sC4
Descriptor: sC4
Authors:Redler, R.L, Huddy, T.F, Hsia, Y, Baker, D, Ekiert, D, Bhabha, G.
Deposit date:2023-03-07
Release date:2024-03-13
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
7UR9
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BU of 7ur9 by Molmil
SARS-Cov2 Main protease in complex with inhibitor CDD-1845
Descriptor: (2P)-2-(isoquinolin-4-yl)-1-[4-(methylamino)-4-oxobutyl]-N-[(1S)-1-(naphthalen-2-yl)ethyl]-1H-benzimidazole-7-carboxamide, 3C-like proteinase nsp5
Authors:Lu, S, Palzkill, T.
Deposit date:2022-04-21
Release date:2023-07-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
7URB
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BU of 7urb by Molmil
Sars-Cov2 Main Protease in complex with CDD-1733
Descriptor: (2P)-2-(isoquinolin-4-yl)-1-[(1s,3R)-3-(methylcarbamoyl)cyclobutyl]-N-{(1S)-1-[4-(trifluoromethyl)phenyl]butyl}-1H-benzimidazole-7-carboxamide, 3C-like proteinase
Authors:Lu, S, Palzkill, T, Matzuk, M.M, Judge, A.
Deposit date:2022-04-21
Release date:2023-07-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
7US4
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BU of 7us4 by Molmil
Sars-Cov2 Main Protease in complex with CDD-1819
Descriptor: (2P)-2-(isoquinolin-4-yl)-1-[(1s,3R)-3-(methylcarbamoyl)cyclobutyl]-N-[(1S)-1-(naphthalen-2-yl)ethyl]-1H-benzimidazole-7-carboxamide, 3C-like proteinase
Authors:Lu, S, Palzkill, T, Matzuk, M.M, Judge, A.
Deposit date:2022-04-22
Release date:2023-07-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors.
Commun Chem, 6, 2023
6NRL
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BU of 6nrl by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A E71G mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-01-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
6O01
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BU of 6o01 by Molmil
X-ray structure of H5N1-NS1 R38A K41A G71E mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-02-14
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
6NQ4
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BU of 6nq4 by Molmil
Crystal structure of a Hydrolase, haloacid dehalogenase-like family from Brucella suis 1330
Descriptor: 1,2-ETHANEDIOL, HAD superfamily hydrolase, PHOSPHATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-01-19
Release date:2019-11-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a Hydrolase, haloacid dehalogenase-like family from Brucella suis 1330
to be published
6OQE
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BU of 6oqe by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-04-26
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.899 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
7UNJ
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BU of 7unj by Molmil
De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester matching geometry of purple bacterial special pair, SP1-ZnPPaM
Descriptor: 1,2-ETHANEDIOL, SP1-ZnPPaM designed chlorophyll dimer protein, SULFATE ION, ...
Authors:Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:2022-04-11
Release date:2023-04-19
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:De novo design of proteins housing excitonically coupled chlorophyll special pairs.
Nat.Chem.Biol., 2024
7UNH
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BU of 7unh by Molmil
De novo designed chlorophyll dimer protein in apo state, SP2
Descriptor: 1,2-ETHANEDIOL, SP2 designed chlorophyll dimer protein
Authors:Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:2022-04-11
Release date:2023-04-19
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:De novo design of proteins housing excitonically coupled chlorophyll special pairs.
Nat.Chem.Biol., 2024
7UNI
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BU of 7uni by Molmil
De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester, SP2-ZnPPaM
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, SP2-ZnPPaM designed chlorophyll dimer protein, ...
Authors:Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:2022-04-11
Release date:2023-04-19
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:De novo design of proteins housing excitonically coupled chlorophyll special pairs.
Nat.Chem.Biol., 2024
6O3V
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BU of 6o3v by Molmil
Crystal structure for RVA-VP3
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Protein VP3, ...
Authors:Kumar, D, Yu, X, Wang, Z, Hu, L, Prasad, V.
Deposit date:2019-02-27
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:2.7 angstrom cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity.
Sci Adv, 6, 2020

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数据于2024-06-26公开中

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