5DE0
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![BU of 5de0 by Molmil](/molmil-images/mine/5de0) | Dye-decolorizing protein from V. cholerae | Descriptor: | Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Uchida, T, Sasaki, M, Tanaka, Y, Yao, M. | Deposit date: | 2015-08-25 | Release date: | 2015-10-21 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.24 Å) | Cite: | A Dye-Decolorizing Peroxidase from Vibrio cholerae. Biochemistry, 54, 2015
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1VCL
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![BU of 1vcl by Molmil](/molmil-images/mine/1vcl) | Crystal Structure of Hemolytic Lectin CEL-III | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... | Authors: | Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T. | Deposit date: | 2004-03-09 | Release date: | 2004-09-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM J.Biol.Chem., 279, 2004
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7VTJ
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![BU of 7vtj by Molmil](/molmil-images/mine/7vtj) | The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain. | Descriptor: | Heavy chain of Fab, Light chain of Fab, VQIIYK peptide | Authors: | Tsuchida, T, Fukuhara, N, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, Y, Ishida, T, Tomoo, K. | Deposit date: | 2021-10-29 | Release date: | 2022-11-02 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain. To Be Published
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7FGK
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![BU of 7fgk by Molmil](/molmil-images/mine/7fgk) | The Fab antibody single structure against tau protein. | Descriptor: | Fab Heavy Chain, Fab Light Chain, GLYCEROL, ... | Authors: | Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | Deposit date: | 2021-07-27 | Release date: | 2022-07-27 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein. To Be Published
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7FGJ
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![BU of 7fgj by Molmil](/molmil-images/mine/7fgj) | The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain. | Descriptor: | CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ... | Authors: | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | Deposit date: | 2021-07-27 | Release date: | 2022-07-27 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain. To Be Published
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7FGR
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![BU of 7fgr by Molmil](/molmil-images/mine/7fgr) | The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain. | Descriptor: | AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ... | Authors: | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | Deposit date: | 2021-07-27 | Release date: | 2022-07-27 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain. To Be Published
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1RTU
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![BU of 1rtu by Molmil](/molmil-images/mine/1rtu) | USTILAGO SPHAEROGENA RIBONUCLEASE U2 | Descriptor: | RIBONUCLEASE U2, SULFATE ION | Authors: | Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T. | Deposit date: | 1995-05-12 | Release date: | 1996-11-08 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution. Biochemistry, 34, 1995
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5EXV
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![BU of 5exv by Molmil](/molmil-images/mine/5exv) | |
1FJD
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![BU of 1fjd by Molmil](/molmil-images/mine/1fjd) | HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14 | Descriptor: | PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE) | Authors: | Terada, T, Shirouzu, M, Fukumori, Y, Fujimori, F, Ito, Y, Kigawa, T, Yokoyama, S, Uchida, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2000-08-08 | Release date: | 2001-08-08 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14. J.Mol.Biol., 305, 2001
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2N9I
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![BU of 2n9i by Molmil](/molmil-images/mine/2n9i) | Solution structure of reduced human cytochrome c | Descriptor: | Cytochrome c, HEME C | Authors: | Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K. | Deposit date: | 2015-11-24 | Release date: | 2016-02-17 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c Biochem.Biophys.Res.Commun., 469, 2016
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2N9J
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![BU of 2n9j by Molmil](/molmil-images/mine/2n9j) | Solution structure of oxidized human cytochrome c | Descriptor: | Cytochrome c, HEME C | Authors: | Imai, M, Saio, T, Kumeta, H, Uchida, T, Inagaki, F, Ishimori, K. | Deposit date: | 2015-11-24 | Release date: | 2016-02-17 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c. Biochem.Biophys.Res.Commun., 469, 2016
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5H6O
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![BU of 5h6o by Molmil](/molmil-images/mine/5h6o) | Porphobilinogen deaminase from Vibrio Cholerae | Descriptor: | 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, MAGNESIUM ION, Porphobilinogen deaminase | Authors: | Funamizu, T, Chen, M, Tanaka, Y, Ishimori, K, Uchida, T. | Deposit date: | 2016-11-14 | Release date: | 2017-11-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.702 Å) | Cite: | Porphobilinogen deaminase from Vibrio Cholerae To Be Published
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2D3B
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![BU of 2d3b by Molmil](/molmil-images/mine/2d3b) | Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine | Descriptor: | (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | Deposit date: | 2005-09-26 | Release date: | 2006-07-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY J.Biol.Chem., 281, 2006
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2D3A
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![BU of 2d3a by Molmil](/molmil-images/mine/2d3a) | Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ... | Authors: | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | Deposit date: | 2005-09-26 | Release date: | 2006-07-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.63 Å) | Cite: | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY J.Biol.Chem., 281, 2006
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2D3C
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![BU of 2d3c by Molmil](/molmil-images/mine/2d3c) | Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Phosphinothricin Phosphate | Descriptor: | (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... | Authors: | Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. | Deposit date: | 2005-09-26 | Release date: | 2006-07-18 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3.81 Å) | Cite: | Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY J.Biol.Chem., 281, 2006
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2Z48
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![BU of 2z48 by Molmil](/molmil-images/mine/2z48) | Crystal Structure of Hemolytic Lectin CEL-III Complexed with GalNac | Descriptor: | 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ... | Authors: | Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y. | Deposit date: | 2007-06-13 | Release date: | 2007-10-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds J.Biol.Chem., 282, 2007
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2Z49
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![BU of 2z49 by Molmil](/molmil-images/mine/2z49) | Crystal Structure of Hemolytic Lectin CEL-III Complexed with methyl-alpha-D-galactopylanoside | Descriptor: | CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ... | Authors: | Hatakeyama, T, Unno, H, Eto, S, Hidemura, H, Uchida, T, Kouzuma, Y. | Deposit date: | 2007-06-13 | Release date: | 2007-10-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds J.Biol.Chem., 282, 2007
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6LRA
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![BU of 6lra by Molmil](/molmil-images/mine/6lra) | The complex structure of PHF core domain peptide of tau and antibody's Fab domain. | Descriptor: | Fab Heavy Chain, Fab Light Chain, VQIINK | Authors: | Tomohiro, T, Kouki, S, Tomohiro, S, Takahiro, T, Katsushiro, M, Yasuko, I, Katsuhiko, M, Taizo, T, Toshimitsu, I, Koji, T. | Deposit date: | 2020-01-15 | Release date: | 2020-08-26 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of the human tau PHF core domain VQIINK complexed with the Fab domain of monoclonal antibody Tau2r3. Febs Lett., 2020
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7FGL
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![BU of 7fgl by Molmil](/molmil-images/mine/7fgl) | The complex structure of PHF core domain peptide of tau, VQIVYK, and antibody's Fab domain. | Descriptor: | AMMONIUM ION, Fab Heavy Chain, Fab Light Chain, ... | Authors: | Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K. | Deposit date: | 2021-07-27 | Release date: | 2022-07-27 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | The cross-reaction complex structure with VQIVYK of tau and the antibody's Fab domain. To Be Published
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4X8Y
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![BU of 4x8y by Molmil](/molmil-images/mine/4x8y) | Crystal structure of human PGRMC1 cytochrome b5-like domain | Descriptor: | Membrane-associated progesterone receptor component 1, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Nakane, T, Yamamoto, T, Shimamura, T, Kobayashi, T, Kabe, Y, Suematsu, M. | Deposit date: | 2014-12-11 | Release date: | 2016-03-23 | Last modified: | 2020-02-05 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance Nat Commun, 7, 2016
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5B51
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![BU of 5b51 by Molmil](/molmil-images/mine/5b51) | Crystal structure of heme binding protein HmuT R242A mutant | Descriptor: | ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Muraki, N, Aono, S. | Deposit date: | 2016-04-20 | Release date: | 2017-03-01 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters Int J Mol Sci, 17, 2016
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5B4Z
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![BU of 5b4z by Molmil](/molmil-images/mine/5b4z) | Crystal structure of heme binding protein HmuT H141A mutant | Descriptor: | ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Muraki, N, Aono, S. | Deposit date: | 2016-04-20 | Release date: | 2017-03-01 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters Int J Mol Sci, 17, 2016
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5B50
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![BU of 5b50 by Molmil](/molmil-images/mine/5b50) | Crystal structure of heme binding protein HmuT Y240A | Descriptor: | ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Muraki, N, Aono, S. | Deposit date: | 2016-04-20 | Release date: | 2017-03-01 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters Int J Mol Sci, 17, 2016
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2V1K
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![BU of 2v1k by Molmil](/molmil-images/mine/2v1k) | Crystal structure of ferrous deoxymyoglobin at pH 6.8 | Descriptor: | GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K. | Deposit date: | 2007-05-24 | Release date: | 2007-06-12 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.25 Å) | Cite: | Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O J.Biol.Chem., 282, 2007
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2V1I
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![BU of 2v1i by Molmil](/molmil-images/mine/2v1i) | Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 6.8 | Descriptor: | GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K. | Deposit date: | 2007-05-24 | Release date: | 2007-06-12 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O J.Biol.Chem., 282, 2007
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