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5FK5
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BU of 5fk5 by Molmil
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is AA
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.315 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
1LFD
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BU of 1lfd by Molmil
CRYSTAL STRUCTURE OF THE ACTIVE RAS PROTEIN COMPLEXED WITH THE RAS-INTERACTING DOMAIN OF RALGDS
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RALGDS, ...
Authors:Huang, L, Hofer, F, Martin, G.S, Kim, S.-H.
Deposit date:1998-04-29
Release date:1999-05-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the interaction of Ras with RalGDS.
Nat.Struct.Biol., 5, 1998
6FZ0
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BU of 6fz0 by Molmil
Crystal structure of the metY SAM V riboswitch
Descriptor: MAGNESIUM ION, S-ADENOSYLMETHIONINE, SODIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2018-03-13
Release date:2018-07-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structure and ligand binding of the SAM-V riboswitch.
Nucleic Acids Res., 46, 2018
5NEF
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BU of 5nef by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidine
Descriptor: GUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-10
Release date:2017-06-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NDH
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BU of 5ndh by Molmil
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop
Descriptor: GUANIDINE, MAGNESIUM ION, RNA (5'-R(*GP*(CBV)P*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*GP*C)-3'), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-08
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEP
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BU of 5nep by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidine
Descriptor: 1-METHYLGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEO
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BU of 5neo by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop
Descriptor: AMMONIUM ION, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEQ
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BU of 5neq by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidine
Descriptor: AMINOGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEX
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BU of 5nex by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatine
Descriptor: AGMATINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-13
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NWQ
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BU of 5nwq by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine.
Descriptor: GUANIDINE, Guanidine III riboswitch, MAGNESIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-08
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZD
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BU of 5nzd by Molmil
The structure of the thermobifida fusca guanidine III riboswitch in space group P212121.
Descriptor: ACETATE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-13
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZ3
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BU of 5nz3 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine
Descriptor: 1-METHYLGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-12
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.059 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NOM
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BU of 5nom by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidine
Descriptor: GUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-04-12
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5LR3
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BU of 5lr3 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*UP*GP*GP*C)-3'), SULFATE ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LR5
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BU of 5lr5 by Molmil
N6-methyladenine is accommodated in a conventional A-U basepair
Descriptor: RNA (5'-R(*GP*GP*(6MZ)P*CP*UP*AP*GP*UP*(CBV)P*C)-3'), SULFATE ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5NY8
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BU of 5ny8 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine
Descriptor: AMINOGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-11
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZ6
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BU of 5nz6 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine in space group P3212.
Descriptor: GUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-12
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NDI
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BU of 5ndi by Molmil
The structure of the E.coli guanidine II riboswitch P1 stem-loop
Descriptor: GUANIDINE, RNA (5'-R(*UP*UP*UP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*CP*UP*GP*(CBV)P*AP*AP*A)-3'), SODIUM ION
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-08
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5LQO
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BU of 5lqo by Molmil
RNA duplex has central consecutive GA pairs flanked by G-C basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*CP*GP*GP*C)-3')
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-17
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5O62
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BU of 5o62 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine.
Descriptor: MAGNESIUM ION, N-ETHYLGUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-04
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5O69
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BU of 5o69 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with agmatine.
Descriptor: AGMATINE, MAGNESIUM ION, RNA (37-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-06
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.319 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
1YCY
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BU of 1ycy by Molmil
Conserved hypothetical protein Pfu-1806301-001 from Pyrococcus furiosus
Descriptor: Conserved hypothetical protein
Authors:Huang, L, Liu, Z.-J, Lee, D, Tempel, W, Chang, J, Zhao, M, Habel, J, Xu, H, Chen, L, Nguyen, D, Chang, S.-H, Horanyi, P, Florence, Q, Zhou, W, Lin, D, Zhang, H, Praissman, J, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-12-23
Release date:2005-02-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conserved hypothetical protein Pfu-1806301-001 from Pyrococcus furiosus
To be published
1LXD
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BU of 1lxd by Molmil
CRYSTAL STRUCTURE OF THE RAS INTERACTING DOMAIN OF RALGDS, A GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR OF RAL PROTEIN
Descriptor: RALGDSB
Authors:Huang, L, Weng, X.W, Hofer, F, Martin, G.S, Kim, S.H.
Deposit date:1997-03-05
Release date:1998-03-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three-dimensional structure of the Ras-interacting domain of RalGDS.
Nat.Struct.Biol., 4, 1997
6YL5
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BU of 6yl5 by Molmil
Crystal structure of the SAM-SAH riboswitch with SAH
Descriptor: Chains: A,B,C,D,E,F,G,H,I,J,K,L, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-06
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 2020
6YMI
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BU of 6ymi by Molmil
Crystal structure of the SAM-SAH riboswitch with AMP.
Descriptor: 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE), ADENOSINE MONOPHOSPHATE, Chains: A,C,F,I,M,O, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020

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