Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6L6X
DownloadVisualize
BU of 6l6x by Molmil
The structure of ScoE with substrate
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, D(-)-TARTARIC ACID, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L86
DownloadVisualize
BU of 6l86 by Molmil
The structure of SfaA
Descriptor: (2S)-2-hydroxybutanedioic acid, D-MALATE, FE (II) ION, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-11-05
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L6W
DownloadVisualize
BU of 6l6w by Molmil
The structure of ScoE with intermediate
Descriptor: (3R)-3-[[(1R)-1,2-bis(oxidanyl)-2-oxidanylidene-ethyl]amino]butanoic acid, FE (II) ION, FORMIC ACID, ...
Authors:Chen, T.Y, Chen, J, Zhou, J, Chang, W.
Deposit date:2019-10-29
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Pathway from N-Alkylglycine to Alkylisonitrile Catalyzed by Iron(II) and 2-Oxoglutarate-Dependent Oxygenases.
Angew.Chem.Int.Ed.Engl., 59, 2020
4WIZ
DownloadVisualize
BU of 4wiz by Molmil
Crystal structure of Grouper nervous necrosis virus-like particle at 3.6A
Descriptor: CALCIUM ION, Coat protein
Authors:Chen, N.C, Chen, C.J, Yoshimura, M, Guan, H.H, Chen, T.Y.
Deposit date:2014-09-28
Release date:2015-10-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral Infection
Plos Pathog., 11, 2015
4RFU
DownloadVisualize
BU of 4rfu by Molmil
Crystal structure of truncated P-domain from Grouper nervous necrosis virus capsid protein at 1.2A
Descriptor: CALCIUM ION, Coat protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Chen, N.C, Chen, C.J, Yoshimura, M, Guan, H.H, Chen, T.Y.
Deposit date:2014-09-27
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral Infection
Plos Pathog., 11, 2015
4RFT
DownloadVisualize
BU of 4rft by Molmil
T=1 subviral particle of Grouper nervous necrosis virus capsid protein deletion mutant (delta 1-34 & 218-338)
Descriptor: Coat protein
Authors:Chen, N.C, Chen, C.J, Yoshimura, M, Guan, H.H, Chen, T.Y.
Deposit date:2014-09-27
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral Infection
Plos Pathog., 11, 2015
4ZRA
DownloadVisualize
BU of 4zra by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS LPRG BINDING TO TRIACYLGLYCERIDE
Descriptor: Lipoprotein LprG, Tripalmitoylglycerol
Authors:Martinot, A.J, Farrow, M, Bai, L, Layre, E, Cheng, T.Y, Tsai, J.H.C, Iqbal, J, Annand, J, Sullivan, Z, Hussain, M, Sacchettini, J, Moody, D.B, Seeliger, J, Rubin, E.J, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-05-12
Release date:2016-02-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Mycobacterial Metabolic Syndrome: LprG and Rv1410 Regulate Triacylglyceride Levels, Growth Rate and Virulence in Mycobacterium tuberculosis.
Plos Pathog., 12, 2016
1XZ0
DownloadVisualize
BU of 1xz0 by Molmil
Crystal structure of CD1a in complex with a synthetic mycobactin lipopeptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 6-(HYDROXY-HEXADECANOYL-AMINO)-2-{[(4S)-2-(2-HYDROXY-PHENYL)-4,5-DIHYDRO-OXAZOLE-4-CARBONYL]-AMINO}-HEXANOIC ACID 2-[(3S)-1-(TERT-BUTYL-DIPHENYL-SILANYLOXY)-2-OXO-AZEPAN-3-YLCARBAMOYL]-(1S)-1-METHYL-ETHYL ESTER, Beta-2-microglobulin, ...
Authors:Zajonc, D.M, Crispin, M.D, Bowden, T.A, Young, D.C, Cheng, T.Y, Hu, J, Costello, C.E, Miller, M.J, Moody, D.B, Wilson, I.A.
Deposit date:2004-11-11
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular Mechanism of Lipopeptide Presentation by CD1a.
Immunity, 22, 2005
3OUV
DownloadVisualize
BU of 3ouv by Molmil
SeMet Derivative of L512M mutant of PASTA domain 3 of Mycobacterium tuberculosis PknB
Descriptor: Serine/threonine protein kinase
Authors:Prigozhin, D.M, Chen, T.Y, Alber, T.
Deposit date:2010-09-15
Release date:2011-09-21
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.
J.Biol.Chem., 291, 2016
7SCP
DownloadVisualize
BU of 7scp by Molmil
The crystal structure of ScoE in complex with intermediate
Descriptor: (3R)-3-(oxaloamino)butanoic acid, 1,2-ETHANEDIOL, FE (II) ION, ...
Authors:Cha, L, Chen, J, Zhou, J, Chang, W.
Deposit date:2021-09-28
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N-C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis
Acs Catalysis, 12, 2022
8KIF
DownloadVisualize
BU of 8kif by Molmil
The structure of MmaE with substrate
Descriptor: (3R)-3-(2-hydroxy-2-oxoethylamino)decanoic acid, FE (II) ION, Putative dioxygenase
Authors:Chen, J, Zhou, J.
Deposit date:2023-08-23
Release date:2024-04-17
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Variation in biosynthesis and metal-binding properties of isonitrile-containing peptides produced by Mycobacteria versus Streptomyces.
Acs Catalysis, 14, 2024
8KHT
DownloadVisualize
BU of 8kht by Molmil
The structure of Rv0097 with substrate
Descriptor: (3R)-3-(2-hydroxy-2-oxoethylamino)decanoic acid, FE (II) ION, Oxidoreductase
Authors:Chen, J, Zhou, J.
Deposit date:2023-08-22
Release date:2024-04-17
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Variation in biosynthesis and metal-binding properties of isonitrile-containing peptides produced by Mycobacteria versus Streptomyces.
Acs Catalysis, 14, 2024
7SH4
DownloadVisualize
BU of 7sh4 by Molmil
CD1a-phosphatidylglycerol binary structure
Descriptor: (21R,24R,27S)-24,27,28-trihydroxy-18,24-dioxo-19,23,25-trioxa-24lambda~5~-phosphaoctacosan-21-yl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Wegrecki, M, Rossjohn, J.
Deposit date:2021-10-07
Release date:2022-10-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Staphylococcal phosphatidylglycerol antigens activate human T cells via CD1a.
Nat.Immunol., 24, 2023
5B73
DownloadVisualize
BU of 5b73 by Molmil
Crystal structure of human ZMYND8 PHD-Bromo-PWWP domain
Descriptor: Protein kinase C-binding protein 1, ZINC ION
Authors:Li, H, Li, Y, Zheng, X.
Deposit date:2016-06-03
Release date:2016-11-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ZMYND8 Reads the Dual Histone Mark H3K4me1-H3K14ac to Antagonize the Expression of Metastasis-Linked Genes
Mol.Cell, 63, 2016
7TCL
DownloadVisualize
BU of 7tcl by Molmil
Crystal structure of P.IsnB complexed with tyrosine isonitrile
Descriptor: (2S)-3-(4-hydroxyphenyl)-2-isocyanopropanoic acid, MANGANESE (II) ION, SULFATE ION, ...
Authors:Kim, W, Zhang, Y.
Deposit date:2021-12-26
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate.
Nat Commun, 13, 2022
2MRP
DownloadVisualize
BU of 2mrp by Molmil
NMR solution structure of the Ubiquitin like domain (UBL) of DNA-damage-inducible 1 protein (Ddi1)
Descriptor: DNA damage-inducible protein 1
Authors:Nowicka, U, Fushman, D, Chen, T.
Deposit date:2014-07-14
Release date:2015-03-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
7KP1
DownloadVisualize
BU of 7kp1 by Molmil
CD1a-42:2 SM binary complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-2-microglobulin, T-cell surface glycoprotein CD1a, ...
Authors:Wegrecki, M, Le Nours, J, Rossjohn, J.
Deposit date:2020-11-10
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:CD1a selectively captures endogenous cellular lipids that broadly block T cell response.
J.Exp.Med., 218, 2021
7KP0
DownloadVisualize
BU of 7kp0 by Molmil
CD1a-42:1 SM binary complex
Descriptor: (4R,7S)-4-hydroxy-7-[(1S,2E)-1-hydroxyhexadec-2-en-1-yl]-N,N,N-trimethyl-4,9-dioxo-3,5-dioxa-8-aza-4lambda~5~-phosphadotriacontan-1-aminium, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
Authors:Wegrecki, M, Le Nours, J, Rossjohn, J.
Deposit date:2020-11-10
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CD1a selectively captures endogenous cellular lipids that broadly block T cell response.
J.Exp.Med., 218, 2021
7KOZ
DownloadVisualize
BU of 7koz by Molmil
CD1a-36:2 SM binary complex
Descriptor: (4S,7S,17Z)-4-hydroxy-7-[(1S,2E)-1-hydroxyhexadec-2-en-1-yl]-N,N,N-trimethyl-4,9-dioxo-3,5-dioxa-8-aza-4lambda~5~-phosphahexacos-17-en-1-aminium, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wegrecki, M, Le Nours, J, Rossjohn, J.
Deposit date:2020-11-10
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:CD1a selectively captures endogenous cellular lipids that broadly block T cell response.
J.Exp.Med., 218, 2021
2MWS
DownloadVisualize
BU of 2mws by Molmil
Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1
Descriptor: DNA damage-inducible protein 1, Ubiquitin
Authors:Fushman, D, Nowicka, U, Walker, O.
Deposit date:2014-11-23
Release date:2015-03-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2MRO
DownloadVisualize
BU of 2mro by Molmil
Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1)
Descriptor: DNA damage-inducible protein 1, Polyubiquitin-B
Authors:Zhang, D, Fushman, D.
Deposit date:2014-07-14
Release date:2015-02-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2MR9
DownloadVisualize
BU of 2mr9 by Molmil
NMR structure of UBA domain of DNA-damage-inducible 1 protein (Ddi1)
Descriptor: DNA damage-inducible protein 1
Authors:Zhang, D, Fushman, D.
Deposit date:2014-07-02
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
5E12
DownloadVisualize
BU of 5e12 by Molmil
Crystal Structure of PASTA Domains 2, 3 and 4 of Mycobacterium tuberculosis Protein Kinase B
Descriptor: CITRATE ANION, Serine/threonine-protein kinase PknB
Authors:Prigozhin, D.M, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-09-29
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.
J.Biol.Chem., 291, 2016
5E10
DownloadVisualize
BU of 5e10 by Molmil
Crystal Structure of PASTA Domains 1 and 2 of Mycobacterium tuberculosis Protein Kinase B
Descriptor: Serine/threonine-protein kinase PknB
Authors:Prigozhin, D.M, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-09-29
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.
J.Biol.Chem., 291, 2016
2G7M
DownloadVisualize
BU of 2g7m by Molmil
Crystal structure of B. fragilis N-succinylornithine transcarbamylase P90E mutant complexed with carbamoyl phosphate and N-acetylnorvaline
Descriptor: N-ACETYL-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, SULFATE ION, ...
Authors:Shi, D, Yu, X, Roth, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2006-02-28
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007

 

123>

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon