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1R79
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Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
Descriptor: Diacylglycerol kinase, delta, ZINC ION
Authors:Miyamoto, K, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-21
Release date:2004-04-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
To be Published
1UIM
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BU of 1uim by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1UIN
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BU of 1uin by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1UHZ
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BU of 1uhz by Molmil
Solution structure of dsRNA binding domain in Staufen homolog 2
Descriptor: staufen (RNA binding protein) homolog 2
Authors:He, F, Muto, Y, Obayashi, N, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Koboyashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2004-08-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of dsRNA binding domain in Staufen homolog 2
To be Published
1UIY
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BU of 1uiy by Molmil
Crystal Structure of Enoyl-CoA Hydratase from Thermus Thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, Enoyl-CoA Hydratase, GLYCEROL
Authors:Bagautdinov, B, Kuramitsu, S, Yokoyama, S, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-24
Release date:2003-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of enoyl-CoA hydratase from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 77, 2021
1V5J
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Solution Structure of RSGI RUH-008, fn3 domain in Human cDNA
Descriptor: KIAA1355 protein
Authors:Doi-Katayama, Y, Hayashi, F, Hirota, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-25
Release date:2004-05-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-008, a fn3 domain in Human cDNA
To be Published
1UJV
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BU of 1ujv by Molmil
Solution structure of the second PDZ domain of human membrane associated guanylate kinase inverted-2 (MAGI-2)
Descriptor: MEMBRANE ASSOCIATED GUANYLATE KINASE INVERTED-2 (MAGI-2)
Authors:Nameki, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-11
Release date:2004-02-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the second PDZ domain of human membrane associated guanylate kinase inverted-2 (MAGI-2)
To be Published
1V7R
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Structure of nucleotide triphosphate pyrophosphatase from pyrococcus horikoshii OT3
Descriptor: CITRIC ACID, hypothetical protein PH1917
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-22
Release date:2003-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes.
J.Mol.Biol., 375, 2008
1UJY
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Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
Descriptor: Rho guanine nucleotide exchange factor 6
Authors:He, F, Muto, Y, Uda, H, Koshiba, S, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Ohara, O, Nagase, T, Kikuno, R, Nagayama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-12
Release date:2004-02-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of SH3 domain in Rac/Cdc42 guanine nucleotide exchange factor(GEF) 6
To be Published
1UL5
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Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 7
Descriptor: ZINC ION, squamosa promoter binding protein-like 7
Authors:Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-09
Release date:2004-03-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors.
J.Mol.Biol., 337, 2004
1UKK
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BU of 1ukk by Molmil
Structure of Osmotically Inducible Protein C from Thermus thermophilus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Osmotically Inducible Protein C
Authors:Rehse, P.H, Kuramitsu, S, Yokoyama, S, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-24
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic Structure and Biochemical Analysis of the Thermus thermophilus Osmotically Inducible Protein C
J.MOL.BIOL., 338, 2004
1RRB
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BU of 1rrb by Molmil
THE RAS-BINDING DOMAIN OF RAF-1 FROM RAT, NMR, 1 STRUCTURE
Descriptor: RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE
Authors:Terada, T, Ito, Y, Shirouzu, M, Tateno, M, Hashimoto, K, Kigawa, T, Ebisuzaki, T, Takio, K, Shibata, T, Yokoyama, S, Smith, B.O, Laue, E.D, Cooper, J.A, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-03-26
Release date:1999-03-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins.
J.Mol.Biol., 286, 1999
1UK5
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Solution structure of the Murine BAG domain of Bcl2-associated athanogene 3
Descriptor: BAG-family molecular chaperone regulator-3
Authors:Hatta, R, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-19
Release date:2004-02-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The C-terminal BAG domain of BAG5 induces conformational changes of the Hsp70 nucleotide-binding domain for ADP-ATP exchange
Structure, 18, 2010
1VC4
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Crystal Structure of Indole-3-Glycerol Phosphate Synthase (TrpC) from Thermus Thermophilus At 1.8 A Resolution
Descriptor: ACETIC ACID, GLYCEROL, Indole-3-Glycerol Phosphate Synthase, ...
Authors:Bagautdinov, B, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-04
Release date:2004-03-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of indole-3-glycerol phosphate synthase from Thermus thermophilus HB8: implications for thermal stability.
Acta Crystallogr.,Sect.D, 67, 2011
1V2F
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Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
Descriptor: Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V2X
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TrmH
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
Authors:Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-17
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
1V2Z
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Crystal structure of the C-terminal domain of Thermosynechococcus elongatus BP-1 KaiA
Descriptor: circadian clock protein KaiA homolog
Authors:Uzumaki, T, Fujita, M, Nakatsu, T, Hayashi, F, Shibata, H, Itoh, N, Kato, H, Ishiura, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-20
Release date:2004-06-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the C-terminal clock-oscillator domain of the cyanobacterial KaiA protein
NAT.STRUCT.MOL.BIOL., 11, 2004
1V9M
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BU of 1v9m by Molmil
Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus
Descriptor: GLYCEROL, V-type ATP synthase subunit C
Authors:Numoto, N, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-26
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1UL4
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BU of 1ul4 by Molmil
Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4
Descriptor: ZINC ION, squamosa promoter binding protein-like 4
Authors:Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-09
Release date:2004-03-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors.
J.Mol.Biol., 337, 2004
1V2B
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Crystal Structure of PsbP Protein in the Oxygen-Evolving Complex of Photosystem II from Higher Plants
Descriptor: 23-kDa polypeptide of photosystem II oxygen-evolving complex, SULFATE ION, alpha-D-glucopyranose
Authors:Ifuku, K, Nakatsu, T, Kato, H, Sato, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-14
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the PsbP protein of photosystem II from Nicotiana tabacum
Embo Rep., 5, 2004
1V33
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Crystal structure of DNA primase from Pyrococcus horikoshii
Descriptor: DNA primase small subunit, PHOSPHATE ION, ZINC ION
Authors:Ito, N, Nureki, O, Shirouzu, M, Yokoyama, S, Hanaoka, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-25
Release date:2004-03-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.
Genes Cells, 8, 2003
1V6G
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Solution Structure of the LIM Domain of the Human Actin Binding LIM Protein 2
Descriptor: Actin Binding LIM Protein 2, ZINC ION
Authors:Miyamoto, K, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-29
Release date:2004-06-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the LIM Domain of the Human Actin Binding LIM Protein 2
To be Published
1V2D
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Crystal Structure of T.th HB8 Glutamine Aminotransferase
Descriptor: Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V34
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Crystal structure of Pyrococcus horikoshii DNA primase-UTP complex
Descriptor: DNA primase small subunit, URIDINE 5'-TRIPHOSPHATE, ZINC ION
Authors:Ito, N, Nureki, O, Shirouzu, M, Yokoyama, S, Hanaoka, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-25
Release date:2004-03-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.
Genes Cells, 8, 2003
1V8Z
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X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, Tryptophan synthase beta chain 1
Authors:Hioki, Y, Ogasahara, K, Lee, S.J, Ma, J, Ishida, M, Yamagata, Y, Matsuura, Y, Ota, M, Kuramitsu, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-15
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The crystal structure of the tryptophan synthase beta subunit from the hyperthermophile Pyrococcus furiosus. Investigation of stabilization factors
Eur.J.Biochem., 271, 2004

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