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3WU5
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BU of 3wu5 by Molmil
Reduced E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
3WJ9
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BU of 3wj9 by Molmil
Crystal structure of the eukaryotic initiation factor
Descriptor: Eukaryotic translation initiation factor 2A
Authors:Kashiwagi, K, Ito, T, Yokoyama, S.
Deposit date:2013-10-07
Release date:2014-03-12
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Crystal structure of the eukaryotic translation initiation factor 2A from Schizosaccharomyces pombe.
J Struct Funct Genomics, 15, 2014
3WHE
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BU of 3whe by Molmil
A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fujii, Y, Sumida, T, Shirouzu, M, Yokoyama, S.
Deposit date:2013-08-25
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4 Å)
Cite:Conserved neutralizing epitope at globular head of hemagglutinin in H3N2 influenza viruses.
J.Virol., 88, 2014
3WU3
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BU of 3wu3 by Molmil
Reduced-form structure of E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
3UMX
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BU of 3umx by Molmil
Crystal structure of Pim1 kinase in complex with inhibitor (Z)-2-[(1H-indol-3-yl)methylene]-7-(azepan-1-ylmethyl)-6-hydroxybenzofuran-3(2H)-one
Descriptor: (2Z)-7-(azepan-1-ylmethyl)-6-hydroxy-2-(1H-indol-3-ylmethylidene)-1-benzofuran-3(2H)-one, Proto-oncogene serine/threonine-protein kinase pim-1, SULFATE ION
Authors:Parker, L.J, Handa, N, Yokoyama, S.
Deposit date:2011-11-15
Release date:2012-08-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Flexibility of the P-loop of Pim-1 kinase: observation of a novel conformation induced by interaction with an inhibitor
Acta Crystallogr.,Sect.F, 68, 2012
3WU6
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BU of 3wu6 by Molmil
Oxidized E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
3WU4
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BU of 3wu4 by Molmil
Oxidized-form structure of E.coli Lon Proteolytic domain
Descriptor: Lon protease, SULFATE ION
Authors:Nishii, W, Kukimoto-Niino, M, Terada, T, Shirouzu, M, Muramatsu, T, Yokoyama, S.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.
Nat. Chem. Biol., 11, 2015
4B04
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BU of 4b04 by Molmil
Crystal structure of the Catalytic Domain of Human DUSP26 (C152S)
Descriptor: DUAL SPECIFICITY PROTEIN PHOSPHATASE 26
Authors:Won, E.-Y, Lee, D.Y, Park, S.G, Yokoyama, S, Kim, S.J, Chi, S.-W.
Deposit date:2012-06-28
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.205 Å)
Cite:High-Resolution Crystal Structure of the Catalytic Domain of Human Dual-Specificity Phosphatase 26
Acta Crystallogr.,Sect.D, 69, 2013
2Z0V
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BU of 2z0v by Molmil
Crystal structure of BAR domain of Endophilin-III
Descriptor: SH3-containing GRB2-like protein 3
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of BAR domain of Endophilin-III
To be Published
2YR3
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BU of 2yr3 by Molmil
Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
Descriptor: Myosin light chain kinase, smooth muscle
Authors:Qin, X.R, Kurosaki, C, Yoshida, M, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fourth Ig-like domain from myosin light chain kinase, smooth muscle
To be Published
2YSV
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BU of 2ysv by Molmil
Solution structure of C2H2 type Zinc finger domain 17 in Zinc finger protein 473
Descriptor: ZINC ION, Zinc finger protein 473
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-04
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C2H2 type Zinc finger domain 17 in Zinc finger protein 473
To be Published
2YT8
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BU of 2yt8 by Molmil
Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
Descriptor: Amyloid beta A4 precursor protein-binding family A member 3
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Seiki, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
To be Published
2YUC
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BU of 2yuc by Molmil
Solution structure of the TRAF-type zinc finger domains (102-164) from human TNF receptor associated factor 4
Descriptor: TNF receptor-associated factor 4, ZINC ION
Authors:Hayashi, F, Suetake, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the TRAF-type zinc finger domains (102-164) from human TNF receptor associated factor 4
To be Published
2YYY
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BU of 2yyy by Molmil
Crystal structure of Glyceraldehyde-3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Malay, A.D, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of glyceraldehyde-3-phosphate dehydrogenase from the archaeal hyperthermophile Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 65, 2009
2YQI
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BU of 2yqi by Molmil
Solution structure of the second HMG-box domain from high mobility group protein B3
Descriptor: High mobility group protein B3
Authors:Qin, X.R, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second HMG-box domain from high mobility group protein B3
To be Published
2YTA
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BU of 2yta by Molmil
Solution structure of C2H2 type Zinc finger domain 3 in Zinc finger protein 32
Descriptor: ZINC ION, Zinc finger protein 32
Authors:Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C2H2 type Zinc finger domain 3 in Zinc finger protein 32
To be Published
2YRJ
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BU of 2yrj by Molmil
Solution structure of the C2H2-type zinc finger domain (781-813) from zinc finger protein 473
Descriptor: ZINC ION, Zinc finger protein 473
Authors:Qin, X.R, Izumi, K, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2-type zinc finger domain (781-813) from zinc finger protein 473
To be Published
2YUJ
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BU of 2yuj by Molmil
Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1
Descriptor: Ubiquitin fusion degradation 1-like
Authors:Saito, K, Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1
To be Published
2YVL
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BU of 2yvl by Molmil
Crystal structure of tRNA (m1A58) methyltransferase TrmI from Aquifex aeolicus
Descriptor: Hypothetical protein, S-ADENOSYLMETHIONINE
Authors:Yanagisawa, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of tRNA m(1)A58 methyltransferase TrmI from Aquifex aeolicus in complex with S-adenosyl-L-methionine.
J Struct Funct Genomics, 15, 2014
2YWQ
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BU of 2ywq by Molmil
Crystal structure of Thermus thermophilus Protein Y N-terminal domain
Descriptor: Ribosomal subunit interface protein
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Saito, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-21
Release date:2008-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of Thermus thermophilus Protein Y N-terminal domain
To be Published
2YXH
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BU of 2yxh by Molmil
Crystal structure of mazG-related protein from Thermotoga maritima
Descriptor: MAGNESIUM ION, MazG-related protein
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-26
Release date:2007-10-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of mazG-related protein from Thermotoga maritima
To be Published
2YR2
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BU of 2yr2 by Molmil
Crystal Structure of the Hypothetical regulator from Sulfolobus tokodaii
Descriptor: 146aa long hypothetical transcriptional regulator, ZINC ION
Authors:Kumarevel, T.S, Tanaka, T, Nishio, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of the Hypothetical regulator from Sulfolobus tokodaii
To be Published
2YRD
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BU of 2yrd by Molmil
Solution structure of the zf-Sec23_Sec24 from human Sec23A mutant V69A
Descriptor: Protein transport protein Sec23A, ZINC ION
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-Sec23_Sec24 from human Sec23A mutant V69A
To be Published
2YSQ
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BU of 2ysq by Molmil
Solution structure of the SH3 domain from Rho guanine nucleotide exchange factor 9
Descriptor: Rho guanine nucleotide exchange factor 9
Authors:Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain from Rho guanine nucleotide exchange factor 9
To be Published
2YTC
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BU of 2ytc by Molmil
Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22
Descriptor: Pre-mRNA-splicing factor RBM22
Authors:Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22
To be Published

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