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2ZW7
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BU of 2zw7 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and coenzyme A
Descriptor: BLEOMYCIN A2, Bleomycin acetyltransferase, COENZYME A
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW5
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BU of 2zw5 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal
Descriptor: Bleomycin acetyltransferase, COENZYME A
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
2ZW4
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BU of 2zw4 by Molmil
Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the orthorhombic crystal
Descriptor: Bleomycin acetyltransferase, COENZYME A, SULFATE ION
Authors:Oda, K, Matoba, Y, Sugiyama, M.
Deposit date:2008-12-01
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure.
J.Biol.Chem., 285, 2010
3WSW
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BU of 3wsw by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-bound form
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, L-lactate dehydrogenase, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2014-03-27
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WSV
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BU of 3wsv by Molmil
Crystal structure of minor L-lactate dehydrogenase from Enterococcus mundtii in the ligands-unbound form
Descriptor: GLYCEROL, L-lactate dehydrogenase
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2014-03-27
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:An alternative allosteric regulation mechanism of an acidophilic l-lactate dehydrogenase from Enterococcus mundtii 15-1A.
Febs Open Bio, 4, 2014
3WA6
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BU of 3wa6 by Molmil
Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
Descriptor: SULFATE ION, tannase
Authors:Matoba, Y, Tanaka, N, Sugiyama, M.
Deposit date:2013-04-27
Release date:2013-07-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and mutational analyses of tannase from Lactobacillus plantarum
Proteins, 81, 2013
3WA7
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BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ...
Authors:Matoba, Y, Tanaka, N, Sugiyama, M.
Deposit date:2013-04-27
Release date:2013-07-24
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
3WCK
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BU of 3wck by Molmil
Crystal structure of monomeric photosensitizing fluorescent protein, Supernova
Descriptor: Monomeric photosenitizing fluorescent protein supernova
Authors:Sakai, N, Matsuda, T, Takemoto, K, Nagai, T.
Deposit date:2013-05-27
Release date:2013-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation
Sci Rep, 3, 2013
3AL9
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BU of 3al9 by Molmil
Mouse Plexin A2 extracellular domain
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2
Authors:Nogi, T, Yasui, N, Mihara, E, Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AFC
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BU of 3afc by Molmil
Mouse Semaphorin 6A extracellular domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin-6A
Authors:Yasui, N, Nogi, T, Mihara, E, Takagi, J.
Deposit date:2010-02-26
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
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BU of 3al8 by Molmil
Plexin A2 / Semaphorin 6A complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A2, ...
Authors:Nogi, T, Yasui, N, Mihara, E, Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
2ZMX
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BU of 2zmx by Molmil
Crystal structure of the met1-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 36 hours
Descriptor: CADDIE, COPPER (II) ION, NITRATE ION, ...
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2008-04-21
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
J.Biol.Chem., 281, 2006
1N5D
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BU of 1n5d by Molmil
CRYSTAL STRUCTURE OF PORCINE TESTICULAR CARBONYL REDUCTASE/ 20BETA-HYDROXYSTEROID DEHYDROGENASE
Descriptor: CARBONYL REDUCTASE/20BETA-HYDROXYSTEROID DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Ghosh, D.
Deposit date:2002-11-05
Release date:2002-11-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Porcine Carbonyl Reductase: Structural Basis for a Functional Monomer in Short-Chain Dehydrogenases/Reductases
J.Biol.Chem., 276, 2001
3N4O
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BU of 3n4o by Molmil
Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-one
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, 5'-D(*CP*GP*CP*GP*AP*AP*TP*(B7C)P*CP*GP*CP*G)-3'
Authors:Takenaka, A, Juan, E.C.M, Shimizu, S.
Deposit date:2010-05-22
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res., 2010
3N4N
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BU of 3n4n by Molmil
Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-one
Descriptor: 5'-D(*CP*GP*CP*GP*AP*A)-3', 5'-D(P*TP*TP*(B7C)P*GP*CP*G)-3'
Authors:Takenaka, A, Juan, E.C.M, Shimizu, S.
Deposit date:2010-05-22
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Insights into the DNA stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido [2,3-d]pyrimidin-2-one.
Nucleic Acids Res., 2010
6GO1
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BU of 6go1 by Molmil
Crystal Structure of a Bacillus anthracis peptidoglycan deacetylase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Polysaccharide deacetylase-like protein, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2018-06-01
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:The putative polysaccharide deacetylase Ba0331: cloning, expression, crystallization and structure determination.
Acta Crystallogr.,Sect.F, 75, 2019
3AIX
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BU of 3aix by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (I222)
Descriptor: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
Authors:Kawai, A, Higuchi, S, Miyamoto, S.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
3AIZ
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BU of 3aiz by Molmil
Crystal structure of PCNA2-PCNA3 complex from Sulfolobus tokodaii (P21212)
Descriptor: DNA polymerase sliding clamp B, DNA polymerase sliding clamp C, SULFATE ION
Authors:Kawai, A, Higuchi, S, Miyamoto, S.
Deposit date:2010-05-18
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel heterotetrameric structure of the crenarchaeal PCNA2-PCNA3 complex
J.Struct.Biol., 174, 2011
4V33
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BU of 4v33 by Molmil
Crystal structure of the putative polysaccharide deacetylase BA0330 from bacillus anthracis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, POLYSACCHARIDE DEACETYLASE-LIKE PROTEIN, ...
Authors:Giastas, P, Andreou, A, Bouriotis, V, Eliopoulos, E.
Deposit date:2014-10-16
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Two Putative Polysaccharide Deacetylases are Required for Osmotic Stability and Cell Shape Maintenance in Bacillus Anthracis.
J.Biol.Chem., 290, 2015
1I3T
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BU of 1i3t by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3', MAGNESIUM ION
Authors:Hossain, M.T, Hikima, T, Chatake, T, Masaru, T, Sunami, T, Ueno, Y, Matsuda, A, Takenaka, A.
Deposit date:2001-02-16
Release date:2001-09-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex.
J.Biochem.(Tokyo), 130, 2001
4ZBY
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BU of 4zby by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (uracil complex form)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, URACIL, ...
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBX
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BU of 4zbx by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=0.9000)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, Uracil-DNA glycosylase
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
4ZBZ
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BU of 4zbz by Molmil
Family 4 uracil-DNA glycosylase from Sulfolobus tokodaii (free form, X-ray wavelength=1.5418)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Kawai, A, Miyamoto, S.
Deposit date:2015-04-15
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Febs Lett., 589, 2015
3B1B
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BU of 3b1b by Molmil
The unique structure of wild type carbonic anhydrase alpha-CA1 from Chlamydomonas reinhardtii
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Carbonic anhydrase 1, SULFATE ION, ...
Authors:Shimizu, S, Takenaka, A.
Deposit date:2011-06-29
Release date:2011-11-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The unique structure of carbonic anhydrase alpha CA1 from Chlamydomonas reinhardtii
Acta Crystallogr.,Sect.D, 67, 2011
2YZ7
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BU of 2yz7 by Molmil
X-ray analyses of 3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis
Descriptor: CALCIUM ION, CHLORIDE ION, D-3-hydroxybutyrate dehydrogenase
Authors:Hoque, M.M, Juan, E.C.M, Shimizu, S, Hossain, M.T, Takenaka, A.
Deposit date:2007-05-04
Release date:2008-04-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The structures of Alcaligenes faecalisD-3-hydroxybutyrate dehydrogenase before and after NAD(+) and acetate binding suggest a dynamical reaction mechanism as a member of the SDR family.
Acta Crystallogr.,Sect.D, 64, 2008

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