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2Q83
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BU of 2q83 by Molmil
Crystal structure of ytaA (2635576) from Bacillus subtilis at 2.50 A resolution
Descriptor: 1,2-ETHANEDIOL, ADENOSINE, CITRIC ACID, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2007-06-08
Release date:2007-06-26
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Genomics, evolution, and crystal structure of a new family of bacterial spore kinases.
Proteins, 78, 2010
3H41
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BU of 3h41 by Molmil
CRYSTAL STRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION
Descriptor: ALANINE, D-GLUTAMIC ACID, NLP/P60 family protein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-17
Release date:2009-05-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of the gamma-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-[gamma]-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
Acta Crystallogr.,Sect.F, 66, 2010
3U36
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BU of 3u36 by Molmil
Crystal Structure of PG9 Fab
Descriptor: PG9 Fab heavy chain, PG9 Fab light chain, SULFATE ION
Authors:McLellan, J.S, Kwong, P.D.
Deposit date:2011-10-04
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.281 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3H50
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BU of 3h50 by Molmil
CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION
Descriptor: ACETATE ION, Tetracenomycin polyketide synthesis protein, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-21
Release date:2009-05-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.
Acta Crystallogr.,Sect.F, 66, 2010
3U46
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BU of 3u46 by Molmil
CH04H/CH02L P212121
Descriptor: CH02 Light chain Fab, CH04 Heavy chain Fab
Authors:Louder, R, Pancera, M, McLellan, J.S, Kwong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3UFI
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BU of 3ufi by Molmil
Crystal structure of a putative cell adhesion protein (BACOVA_04980) from Bacteroides ovatus ATCC 8483 at 2.18 A resolution
Descriptor: CHLORIDE ION, SULFATE ION, hypothetical protein BACOVA_04980
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-11-01
Release date:2011-12-14
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3HN7
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BU of 3hn7 by Molmil
Crystal structure of a murein peptide ligase mpl (psyc_0032) from psychrobacter arcticus 273-4 at 1.65 A resolution
Descriptor: UDP-N-acetylmuramate-L-alanine ligase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-05-29
Release date:2009-06-16
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and function of the first full-length murein Peptide ligase (mpl) cell wall recycling protein.
Plos One, 6, 2011
3HSA
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BU of 3hsa by Molmil
Crystal structure of pleckstrin homology domain (YP_926556.1) from SHEWANELLA AMAZONENSIS SB2B at 1.99 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, pleckstrin homology domain
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-10
Release date:2009-06-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3IRB
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BU of 3irb by Molmil
Crystal structure of protein with unknown function from DUF35 family (13815350) from SULFOLOBUS SOLFATARICUS at 1.80 A resolution
Descriptor: ACETIC ACID, SULFATE ION, ZINC ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-08-21
Release date:2009-09-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role.
Acta Crystallogr.,Sect.F, 66, 2010
3TCL
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BU of 3tcl by Molmil
Crystal Structure of HIV-1 Neutralizing Antibody CH04
Descriptor: CH04 Heavy Chain Fab, CH04 Light Chain Fab, IMIDAZOLE
Authors:Louder, R.K, McLellan, J.S, Pancera, M, Yang, Y, Zhang, B, Bonsignori, M, Kwong, P.D.
Deposit date:2011-08-09
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3SY6
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BU of 3sy6 by Molmil
Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Fimbrial protein BF1861
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-15
Release date:2011-08-24
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3UP6
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BU of 3up6 by Molmil
Crystal structure of a putative cell adhesion protein (BACOVA_04078) from Bacteroides ovatus ATCC 8483 at 2.80 A resolution
Descriptor: hypothetical protein BACOVA_04078
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-11-17
Release date:2011-12-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3UWS
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BU of 3uws by Molmil
Crystal structure of a clostripain (PARMER_00083) from Parabacteroides merdae ATCC 43184 at 1.70 A resolution
Descriptor: 1,2-ETHANEDIOL, hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-12-02
Release date:2012-06-13
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure and Activity Studies of the C11 Cysteine Peptidase from Parabacteroides merdae in the Human Gut Microbiome.
J.Biol.Chem., 291, 2016
3U4B
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BU of 3u4b by Molmil
CH04H/CH02L Fab P4
Descriptor: CH02 Light chain, CH04 Heavy chain
Authors:Pancera, M, Louder, R, Mclellan, J.S, KWong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.893 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3U21
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BU of 3u21 by Molmil
Crystal structure of a Fragment of Nuclear factor related to kappa-B-binding protein (residues 370-495) (NFRKB) from Homo sapiens at 2.18 A resolution
Descriptor: Nuclear factor related to kappa-B-binding protein, SODIUM ION
Authors:Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology, Partnership for Stem Cell Biology (STEMCELL)
Deposit date:2011-09-30
Release date:2011-11-02
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure of a Novel Winged-Helix Like Domain from Human NFRKB Protein.
Plos One, 7, 2012
3H0N
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BU of 3h0n by Molmil
Crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 A resolution
Descriptor: ACETATE ION, GLYCEROL, NICKEL (II) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-09
Release date:2009-04-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45  resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator.
Acta Crystallogr.,Sect.F, 66, 2010
3GO5
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BU of 3go5 by Molmil
Crystal structure of a multidomain protein with nucleic acid binding domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Multidomain protein with S1 RNA-binding domains
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-03-18
Release date:2009-04-07
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of a virulence regulatory factor CvfB reveals a novel winged helix RNA binding module.
Structure, 18, 2010
3HBZ
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BU of 3hbz by Molmil
Crystal structure of a putative glycoside hydrolase (bt_2081) from bacteroides thetaiotaomicron vpi-5482 at 2.05 A resolution
Descriptor: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-05-05
Release date:2009-05-26
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 A resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
3T2L
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BU of 3t2l by Molmil
Crystal structure of a Putative cell adhesion protein (BF1858) from Bacteroides fragilis NCTC 9343 at 2.33 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Putative cell adhesion protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-07-22
Release date:2011-08-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
3K5J
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BU of 3k5j by Molmil
Crystal structure of Putative SUFU (suppressor of fused protein) homolog (YP_208451.1) from Neisseria gonorrhoeae FA 1090 at 1.40 A resolution
Descriptor: GLYCEROL, SULFATE ION, Suppressor of fused family protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-10-07
Release date:2010-01-26
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu.
Protein Sci., 19, 2010
3U2S
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BU of 3u2s by Molmil
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Descriptor: (R,R)-2,3-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:McLellan, J.S, Pancera, M, Kwong, P.D.
Deposit date:2011-10-04
Release date:2011-11-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3U4E
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BU of 3u4e by Molmil
Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PG9 Heavy Chain, PG9 Light Chain, ...
Authors:Gorman, J, McLellan, J, Pancera, M, Kwong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.185 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
6U02
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BU of 6u02 by Molmil
CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab-63 Heavy Chain, Fab-63 Light Chain, ...
Authors:Ward, A.B, Turner, H.L, Zhu, X.
Deposit date:2019-08-13
Release date:2019-12-04
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies.
Cell Host Microbe, 26, 2019
6U59
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BU of 6u59 by Molmil
HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SOSIP.664 gp120,SOSIP.664 gp120, ...
Authors:Yang, Y.R, Ward, A.B.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Autologous Antibody Responses to an HIV Envelope Glycan Hole Are Not Easily Broadened in Rabbits.
J.Virol., 94, 2020
6UUD
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BU of 6uud by Molmil
Crystal structure of antibody 5D5 in complex with PfCSP N-terminal peptide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 5D5 Antibody Fab, ...
Authors:Thai, E, Scally, S.W, Julien, J.P.
Deposit date:2019-10-30
Release date:2020-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A high-affinity antibody against the CSP N-terminal domain lacks Plasmodium falciparum inhibitory activity.
J.Exp.Med., 217, 2020

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