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2D7Q
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BU of 2d7q by Molmil
Solution structure of the 23th Filamin domain from human Filamin C
Descriptor: Filamin-C
Authors:Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-11-24
Release date:2006-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 23th Filamin domain from human Filamin C
To be Published
2D8S
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BU of 2d8s by Molmil
Solution structure of the RING domain of the human cellular modulator of immune recognition protein
Descriptor: ZINC ION, cellular modulator of immune recognition
Authors:Miyamoto, K, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-06-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING domain of the human cellular modulator of immune recognition protein
To be Published
2DA4
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BU of 2da4 by Molmil
Solution structure of the homeobox domain of the hypothetical protein, DKFZp686K21156
Descriptor: Hypothetical protein DKFZp686K21156
Authors:Ohnishi, S, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of the hypothetical protein, DKFZp686K21156
To be Published
2D9T
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BU of 2d9t by Molmil
Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
Descriptor: Tudor domain-containing protein 3
Authors:Li, H, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
To be Published
2DA5
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BU of 2da5 by Molmil
Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
Descriptor: Zinc fingers and homeoboxes protein 3
Authors:Ohnishi, S, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
To be Published
2DAN
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BU of 2dan by Molmil
The solution structure of the MYND domain (LEU384-CYS430) of human Zinc finger MYND domain containing protein 10
Descriptor: ZINC ION, Zinc finger MYND domain containing protein 10
Authors:Sasagawa, A, Miyamoto, K, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-06-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the MYND domain (LEU384-CYS430) of human Zinc finger MYND domain containing protein 10
To be Published
2DAS
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BU of 2das by Molmil
Solution structure of TRASH domain of zinc finger MYM-type protein 5
Descriptor: ZINC ION, Zinc finger MYM-type protein 5
Authors:Niraula, T.N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-06-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of TRASH domain of zinc finger MYM-type protein 5
To be Published
8ZM2
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BU of 8zm2 by Molmil
Structure of human pyruvate dehydrogenase kinase 2 complexed with compound 16
Descriptor: [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial, methyl (9~{R})-9-oxidanyl-9-(trifluoromethyl)fluorene-4-carboxylate
Authors:Akai, S, Orita, T, Nomura, A, Adachi, T.
Deposit date:2024-05-22
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Design and synthesis of novel fluorene derivatives as inhibitors of pyruvate dehydrogenase kinase.
Bioorg.Med.Chem.Lett., 109, 2024
8ZM1
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BU of 8zm1 by Molmil
Structure of human pyruvate dehydrogenase kinase 2 complexed with compound 6
Descriptor: (5~{R})-5-propan-2-ylindeno[1,2-b]pyridin-5-ol, [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial
Authors:Akai, S, Orita, T, Nomura, A, Adachi, T.
Deposit date:2024-05-22
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Design and synthesis of novel fluorene derivatives as inhibitors of pyruvate dehydrogenase kinase.
Bioorg.Med.Chem.Lett., 109, 2024
7YNW
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BU of 7ynw by Molmil
Crystal structure of O-(2-nitrobenzyl)-L-tyrosine-tRNA sythetase in complex with O-(2-nitrobenzyl)-L-tyrosine
Descriptor: (2~{S})-2-azanyl-3-[4-[(2-nitrophenyl)methoxy]phenyl]propanoic acid, Tyrosine--tRNA ligase
Authors:Hosaka, T, Shirouzu, M.
Deposit date:2022-08-01
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
7YNU
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BU of 7ynu by Molmil
Crystal structure of Hen Egg white LYSOZYME introduced with O-(2-nitrobenzyl)-L-tyrosine
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Hosaka, T, Shirouzu, M.
Deposit date:2022-08-01
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
7YNV
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BU of 7ynv by Molmil
Crystal structure of photolysed Hen Egg white LYSOZYME introduced with O-(2-nitrobenzyl)-L-tyrosine
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Hosaka, T, Shirouzu, M.
Deposit date:2022-08-01
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
1PPP
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BU of 1ppp by Molmil
CRYSTAL STRUCTURE OF PAPAIN-E64-C COMPLEX. BINDING DIVERSITY OF E64-C TO PAPAIN S2 AND S3 SUBSITES
Descriptor: METHANOL, N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-2-METHYL-BUTANE, PAPAIN
Authors:Ishida, T.
Deposit date:1993-03-17
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of papain-E64-c complex. Binding diversity of E64-c to papain S2 and S3 subsites.
Biochem.J., 287, 1992
7C3N
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BU of 7c3n by Molmil
Crystal structure of JAK3 in complex with Delgocitinib
Descriptor: 3-[(3S,4R)-3-methyl-7-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1,7-diazaspiro[3.4]octan-1-yl]-3-oxidanylidene-propanenitrile, Tyrosine-protein kinase JAK3
Authors:Doi, S, Otira, T, Kikuwaka, M, Nomura, A, Noji, S, Adachi, T.
Deposit date:2020-05-13
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Discovery of a Janus Kinase Inhibitor Bearing a Highly Three-Dimensional Spiro Scaffold: JTE-052 (Delgocitinib) as a New Dermatological Agent to Treat Inflammatory Skin Disorders.
J.Med.Chem., 63, 2020
1FIY
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BU of 1fiy by Molmil
THREE-DIMENSIONAL STRUCTURE OF PHOSPHOENOLPYRUVATE CARBOXYLASE FROM ESCHERICHIA COLI AT 2.8 A RESOLUTION
Descriptor: ASPARTIC ACID, PHOSPHOENOLPYRUVATE CARBOXYLASE
Authors:Kai, Y, Matsumura, H, Inoue, T, Terada, K, Nagara, Y, Yoshinaga, T, Kihara, A, Izui, K.
Deposit date:1998-05-02
Release date:1999-02-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Three-dimensional structure of phosphoenolpyruvate carboxylase: a proposed mechanism for allosteric inhibition.
Proc.Natl.Acad.Sci.USA, 96, 1999
8IU0
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BU of 8iu0 by Molmil
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR1, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Nakamura, S, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2023-03-23
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
8H86
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BU of 8h86 by Molmil
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR1, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2022-10-21
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
8H87
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BU of 8h87 by Molmil
Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR2 in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR2, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2022-10-21
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
8JP6
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BU of 8jp6 by Molmil
Cryo-EM structures of the head region of full-length ERGIC-53 with MCFD2 (Substate A)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JPG
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BU of 8jpg by Molmil
Cryo-EM structure of full-length ERGIC-53 with MCFD2
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-12
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (6.76 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP8
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BU of 8jp8 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate C)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP4
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BU of 8jp4 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (form A)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP7
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BU of 8jp7 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate B)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP9
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BU of 8jp9 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate D)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP5
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BU of 8jp5 by Molmil
Cryo-EM structures of the head region of full-length ERGIC-53 with MCFD2 (form B)
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
Authors:Watanabe, S, Inaba, K.
Deposit date:2023-06-10
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024

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