Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3WD4
DownloadVisualize
BU of 3wd4 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor and quinoline compound
Descriptor: (E)-N-(prop-2-en-1-yloxy)-1-(quinolin-4-yl)methanimine, Chitinase B, GLYCEROL, ...
Authors:Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD1
DownloadVisualize
BU of 3wd1 by Molmil
Serratia marcescens Chitinase B complexed with syn-triazole inhibitor
Descriptor: Chitinase B, GLYCEROL, N,N-dibenzyl-N~5~-[N-(methylcarbamoyl)carbamimidoyl]-N~2~-{[5-({[(E)-(quinolin-4-ylmethylidene)amino]oxy}methyl)-1H-1,2,3-triazol-1-yl]acetyl}-L-ornithinamide, ...
Authors:Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD3
DownloadVisualize
BU of 3wd3 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor
Descriptor: Chitinase B, GLYCEROL, SULFATE ION, ...
Authors:Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD0
DownloadVisualize
BU of 3wd0 by Molmil
Serratia marcescens Chitinase B, tetragonal form
Descriptor: Chitinase B, DITHIANE DIOL, GLYCEROL, ...
Authors:Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
Deposit date:2013-06-06
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
1IWL
DownloadVisualize
BU of 1iwl by Molmil
Crystal Structure of the Lipoprotein Localization Factor, LolA
Descriptor: MAGNESIUM ION, Outer-membrane lipoproteins carrier protein, ZINC ION
Authors:Takeda, K, Miyatake, H, Yokota, N, Matsuyama, S, Tokuda, H, Miki, K.
Deposit date:2002-05-17
Release date:2003-07-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB
Embo J., 22, 2003
1IWN
DownloadVisualize
BU of 1iwn by Molmil
Crystal Structure of the Outer Membrane Lipoprotein Receptor LolB Complexed with PEGMME2000
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, Outer Membrane Lipoprotein LolB, SULFATE ION
Authors:Takeda, K, Miyatake, H, Yokota, N, Matsuyama, S, Tokuda, H, Miki, K.
Deposit date:2002-05-17
Release date:2003-07-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.
Embo J., 22, 2003
8GJU
DownloadVisualize
BU of 8gju by Molmil
Crystal structure of human methylmalonyl-CoA mutase (MMUT) in complex with methylmalonic acidemia type A protein (MMAA), coenzyme A, and GDP
Descriptor: COENZYME A, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Mascarenhas, R.M, Ruetz, M, Gouda, H, Yaw, M, Banerjee, R.
Deposit date:2023-03-16
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Architecture of the human G-protein-methylmalonyl-CoA mutase nanoassembly for B 12 delivery and repair.
Nat Commun, 14, 2023
1UA8
DownloadVisualize
BU of 1ua8 by Molmil
Crystal structure of the lipoprotein localization factor, LolA
Descriptor: Outer-membrane lipoproteins carrier protein
Authors:Takeda, K, Miyatake, H, Yokota, N, Matsuyama, S, Tokuda, H, Miki, K.
Deposit date:2003-03-04
Release date:2003-07-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.
Embo J., 22, 2003
6GGZ
DownloadVisualize
BU of 6ggz by Molmil
NMR structure of the scorpion toxin AmmTx3
Descriptor: Potassium channel toxin alpha-KTx 15.3
Authors:Landon, C, Meudal, H.
Deposit date:2018-05-04
Release date:2019-01-30
Last modified:2020-03-11
Method:SOLUTION NMR
Cite:Synthesis by native chemical ligation and characterization of the scorpion toxin AmmTx3.
Bioorg. Med. Chem., 27, 2019
2MJK
DownloadVisualize
BU of 2mjk by Molmil
Nmr structure of hen egg beta-defensin gallin (chicken ovo-defensin)
Descriptor: Gallin protein
Authors:Landon, C, Meudal, H.
Deposit date:2014-01-10
Release date:2014-01-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Three-dimensional NMR Structure of Hen Egg Gallin (Chicken Ovodefensin) Reveals a New Variation of the beta-Defensin Fold.
J.Biol.Chem., 289, 2014
1XG1
DownloadVisualize
BU of 1xg1 by Molmil
Solution structure of Myb-domain of human TRF2
Descriptor: Telomeric repeat binding factor 2
Authors:Paquet, F, Meudal, H, Amiard, S, Doudeau, M, Paoletti, J, Giraud-Panis, M.J, Lancelot, G.
Deposit date:2004-09-16
Release date:2005-09-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR studies of telomeric nucleoprotein complexes involving the Myb-like domain of the human telomeric protein TRF2
C.R.Chimie, 9, 2006
1ZRV
DownloadVisualize
BU of 1zrv by Molmil
solution structure of spinigerin in H20/TFE 50%
Descriptor: spinigerin
Authors:Landon, C, Meudal, H, Boulanger, N, Bulet, P, Vovelle, F.
Deposit date:2005-05-23
Release date:2005-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation.
Biopolymers, 81, 2006
1ZRX
DownloadVisualize
BU of 1zrx by Molmil
solution structure of stomoxyn in H20/TFE 50%
Descriptor: stomoxyn
Authors:Landon, C, Meudal, H, Boulanger, N, Bulet, P, Vovelle, F.
Deposit date:2005-05-23
Release date:2005-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation.
Biopolymers, 81, 2006
1ZRW
DownloadVisualize
BU of 1zrw by Molmil
solution structure of spinigerin in H20/TFE 10%
Descriptor: spinigerin
Authors:Landon, C, Meudal, H, Boulanger, N, Bulet, P, Vovelle, F.
Deposit date:2005-05-23
Release date:2005-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation.
Biopolymers, 81, 2006
2A51
DownloadVisualize
BU of 2a51 by Molmil
Structure of the (13-51) domain of the nucleocapsid protein NCp8 from SIVlhoest
Descriptor: ZINC ION, nucleocapsid protein
Authors:Morellet, N, Meudal, H, Bouaziz, S, Roques, B.P.
Deposit date:2005-06-30
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the zinc finger domain encompassing residues 13-51 of the nucleocapsid protein from simian immunodeficiency virus
Biochem.J., 393, 2006
2DD9
DownloadVisualize
BU of 2dd9 by Molmil
A mutant of GFP-like protein from Chiridius poppei
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein
Authors:Suto, K, Masuda, H, Takenaka, Y, Mizuno, H.
Deposit date:2006-01-24
Release date:2007-01-23
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei
Genes Cells, 14, 2009
2DD7
DownloadVisualize
BU of 2dd7 by Molmil
A GFP-like protein from marine copepod, Chiridius poppei
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein
Authors:Suto, K, Masuda, H, Takenaka, Y, Mizuno, H.
Deposit date:2006-01-23
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei
Genes Cells, 14, 2009
2KHL
DownloadVisualize
BU of 2khl by Molmil
Refined solution structure of Methanosarcina thermophila protein MC1
Descriptor: Chromosomal protein MC1
Authors:Paquet, F, Meudal, H, Culard, F, Lancelot, G.
Deposit date:2009-04-08
Release date:2009-05-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Refined solution structure and backbone dynamics of the archaeal MC1 protein
Febs J., 277, 2010
2LRM
DownloadVisualize
BU of 2lrm by Molmil
Assignment and structure of E coli periplasmic protein YmgD
Descriptor: Uncharacterized protein ymgD
Authors:Wu, K, Inouye, M, Baum, J, Hsu, S, Masuda, H.
Deposit date:2012-04-07
Release date:2013-04-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of homodimeric periplasmic protein YmgD in E. coli
To be Published
2LRV
DownloadVisualize
BU of 2lrv by Molmil
Assignment of E coli periplasmic protein YmgD
Descriptor: Uncharacterized protein ymgD
Authors:Wu, K, Inouye, M, Baum, J, Hsu, S, Masuda, H.
Deposit date:2012-04-13
Release date:2013-04-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of homodimeric periplasmic protein YmgD in E. coli
To be Published
7C4N
DownloadVisualize
BU of 7c4n by Molmil
Ancestral L-amino acid oxidase (AncLAAO-N5) L-Phe binding form
Descriptor: Ancestral L-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, PHENYLALANINE
Authors:Nakano, S, Minamino, Y, Karasuda, H, Ito, S.
Deposit date:2020-05-18
Release date:2020-12-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ancestral L-amino acid oxidases for deracemization and stereoinversion of amino acids
Commun Chem, 3, 2020
7C4L
DownloadVisualize
BU of 7c4l by Molmil
Anncestral L-amino acid oxidase (AncLAAO-N5) L-Gln binding form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTAMINE, L-amino acid oxidase
Authors:Nakano, S, Minamino, Y, Karasuda, H, Ito, S.
Deposit date:2020-05-18
Release date:2020-12-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ancestral L-amino acid oxidases for deracemization and stereoinversion of amino acids
Commun Chem, 3, 2020
7C4M
DownloadVisualize
BU of 7c4m by Molmil
Ancestral L-amino acid oxidase (AncLAAO-N5) L-Trp binding form
Descriptor: Ancestral L-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, TRYPTOPHAN
Authors:Nakano, S, Minamino, Y, Karasuda, H, Ito, S.
Deposit date:2020-05-18
Release date:2020-12-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ancestral L-amino acid oxidases for deracemization and stereoinversion of amino acids
Commun Chem, 3, 2020
7C4K
DownloadVisualize
BU of 7c4k by Molmil
Ancestral L-amino acid oxidase (AncLAAO-N5) ligand free form
Descriptor: Ancestral L-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nakano, S, Minamino, Y, Karasuda, H, Ito, S.
Deposit date:2020-05-18
Release date:2020-12-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ancestral L-amino acid oxidases for deracemization and stereoinversion of amino acids
Commun Chem, 3, 2020
3WJU
DownloadVisualize
BU of 3wju by Molmil
Crystal structure of the L68D variant of mLolB from Escherichia coli
Descriptor: Outer-membrane lipoprotein LolB, SULFATE ION
Authors:Takeda, K, Tokuda, H, Miki, K.
Deposit date:2013-10-16
Release date:2014-03-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Roles of the Protruding Loop of Factor B Essential for the Localization of Lipoproteins (LolB) in the Anchoring of Bacterial Triacylated Proteins to the Outer Membran
J.Biol.Chem., 289, 2014

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon