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4IMO
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BU of 4imo by Molmil
Crystal structure of wild type human Lipocalin PGDS in complex with substrate analog U44069
Descriptor: (5E)-7-{(1R,4S,5S,6R)-5-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-2-oxabicyclo[2.2.1]hept-6-yl}hept-5-enoic acid, Lipocalin-type prostaglandin-D synthase, THIOCYANATE ION
Authors:Lim, S.M, Chen, D, Teo, H, Roos, A, Nyman, T, Tresaugues, L, Pervushin, K, Nordlund, P.
Deposit date:2013-01-03
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and dynamic insights into substrate binding and catalysis of human lipocalin prostaglandin D synthase.
J.Lipid Res., 54, 2013
4IMN
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BU of 4imn by Molmil
Crystal structure of wild type human Lipocalin PGDS bound with PEG MME 2000
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Lipocalin-type prostaglandin-D synthase
Authors:Lim, S.M, Chen, D, Teo, H, Roos, A, Nyman, T, Tresaugues, L, Pervushin, K, Nordlund, P.
Deposit date:2013-01-03
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and dynamic insights into substrate binding and catalysis of human lipocalin prostaglandin D synthase.
J.Lipid Res., 54, 2013
5AUI
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BU of 5aui by Molmil
Crystal structure of Ferredoxin from Thermosynechococcus elongatus
Descriptor: BENZAMIDINE, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-1
Authors:Kurisu, G, Shinmura, K.
Deposit date:2015-04-21
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:X-ray Structure and Nuclear Magnetic Resonance Analysis of the Interaction Sites of the Ga-Substituted Cyanobacterial Ferredoxin
Biochemistry, 54, 2015
2M1C
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BU of 2m1c by Molmil
HADDOCK structure of GtYybT PAS Homodimer
Descriptor: DHH subfamily 1 protein
Authors:Liang, Z.X, Pervushin, K, Tan, E, Rao, F, Pasunooti, S, Soehano, I, Lescar, J.
Deposit date:2012-11-25
Release date:2013-03-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the PAS Domain of a Thermophilic YybT Protein Homolog Reveals a Potential Ligand-binding Site.
J.Biol.Chem., 288, 2013
2MIA
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BU of 2mia by Molmil
Solution structure of allatide C4, conformation 2
Descriptor: alpha amylase inhibitor
Authors:Bai, Y, Pervushin, K.
Deposit date:2013-12-12
Release date:2015-01-14
Last modified:2015-03-25
Method:SOLUTION NMR
Cite:Allotides: Proline-rich Cystine Knot alpha-Amylase Inhibitors from the Allamanda cathartica
To be Published
2MI9
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BU of 2mi9 by Molmil
Solution structure of allatide C4, conformation 1
Descriptor: alpha amylase inhibitor
Authors:Bai, Y, Pervushin, K.
Deposit date:2013-12-12
Release date:2015-01-14
Last modified:2015-03-25
Method:SOLUTION NMR
Cite:Allotides: Proline-rich Cystine Knot alpha-Amylase Inhibitors from the Allamanda cathartica
To be Published
2MQ6
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BU of 2mq6 by Molmil
Solution structure of Y125F mutant of eRF1 N-domain
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Pillay, S, Li, Y, Wong, L, Pervushin, K.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
1UHT
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BU of 1uht by Molmil
Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
Descriptor: expressed protein
Authors:Tomizawa, T, Inoue, M, Koshiba, S, Hayashi, F, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Matsuda, T, Seki, E, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Shinozaki, K, Seki, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-10
Release date:2004-01-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
To be Published
1SR3
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BU of 1sr3 by Molmil
Solution structure of the heme chaperone CcmE of Escherichia coli
Descriptor: APO-CCME
Authors:Enggist, E, Thony-Meyer, L, Guntert, P, Pervushin, K.
Deposit date:2004-03-22
Release date:2004-04-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR Structure of the Heme Chaperone Ccme Reveals a Novel Functional Motif
Structure, 10, 2002
2MQ9
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BU of 2mq9 by Molmil
Solution structure of E55Q mutant of eRF1 N-domain
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Pillay, S, Li, Y, Wong, L, Pervushin, K.
Deposit date:2014-06-13
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
1ISE
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BU of 1ise by Molmil
Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly
Descriptor: Ribosome Recycling Factor
Authors:Nakano, H, Yoshida, T, Oka, S, Uchiyama, S, Nishina, K, Ohkubo, T, Kato, H, Yamagata, Y, Kobayashi, Y.
Deposit date:2001-11-30
Release date:2003-10-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly
To be Published
1J03
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BU of 1j03 by Molmil
Solution structure of a putative steroid-binding protein from Arabidopsis
Descriptor: putative steroid binding protein
Authors:Suzuki, S, Hatanaka, H, Kigawa, T, Terada, T, Shirouzu, M, Seki, M, Shinozaki, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-29
Release date:2003-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an Arabidopsis homologue of the mammalian membrane-associated progesterone receptor
To be Published
5WY9
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BU of 5wy9 by Molmil
Apo form crystal structure of human Lipocalin PGDS .
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Prostaglandin-H2 D-isomerase
Authors:Saif, M, Pervushin, K.
Deposit date:2017-01-11
Release date:2017-01-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:To be published
To Be Published
2R63
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BU of 2r63 by Molmil
STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES
Descriptor: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434
Authors:Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K.
Deposit date:1996-11-13
Release date:1997-06-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural role of a buried salt bridge in the 434 repressor DNA-binding domain.
J.Mol.Biol., 264, 1996
1R63
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BU of 1r63 by Molmil
STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES
Descriptor: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434
Authors:Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K.
Deposit date:1996-11-08
Release date:1997-06-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural role of a buried salt bridge in the 434 repressor DNA-binding domain.
J.Mol.Biol., 264, 1996
2GTV
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BU of 2gtv by Molmil
NMR structure of monomeric chorismate mutase from Methanococcus jannaschii
Descriptor: 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, chorismate mutase
Authors:Vogeli, B.R.
Deposit date:2006-04-28
Release date:2006-10-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of a molten globular enzyme.
Nat.Struct.Mol.Biol., 14, 2007
3AX8
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BU of 3ax8 by Molmil
Crystal structure of the human vitamin D receptor ligand binding domain complexed with 15alpha-methoxy-1alpha,25-dihydroxyvitamin D3
Descriptor: (1R,3S,5Z)-5-[(2E)-2-[(1R,3S,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-3-methoxy-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Vitamin D3 receptor
Authors:Kakuda, S, Takimoto-Kamimura, M.
Deposit date:2011-03-30
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:New C15-substituted active vitamin D3
Org.Lett., 13, 2011
7TXR
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BU of 7txr by Molmil
Crystal structure of the Vitronectin hemopexin-like domain binding Calcium-2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Aleshin, A.E, Marassi, F.M.
Deposit date:2022-02-09
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for calcium-induced thermostability of human vitronectin
To Be Published
7U68
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BU of 7u68 by Molmil
Crystal structure of the Vitronectin hemopexin-like domain binding Sodium-2
Descriptor: CHLORIDE ION, SODIUM ION, SULFATE ION, ...
Authors:Aleshin, A.E, Marassi, F.M.
Deposit date:2022-03-03
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for calcium-induced thermostability of human vitronectin
To Be Published
5HBC
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BU of 5hbc by Molmil
Intermediate structure of iron-saturated C-lobe of bovine lactoferrin at 2.79 Angstrom resolution indicates the softening of iron coordination
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BICARBONATE ION, FE (III) ION, ...
Authors:Singh, A, Rastogi, N, Singh, P.K, Tyagi, T.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-12-31
Release date:2016-01-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structure of iron saturated C-lobe of bovine lactoferrin at pH 6.8 indicates a weakening of iron coordination
Proteins, 84, 2016
5Z9G
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BU of 5z9g by Molmil
Crystal structure of KAI2
Descriptor: Probable esterase KAI2
Authors:Kim, K.L, Cha, J.S, Soh, M.S, Cho, H.S.
Deposit date:2018-02-03
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.
J. Exp. Bot., 69, 2018
5Z9H
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BU of 5z9h by Molmil
Crystal structure of KAI2_ply2(A219V)
Descriptor: Probable esterase KAI2
Authors:Kim, K.L, Cha, J.S, Soh, M.S, Cho, H.S.
Deposit date:2018-02-03
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.
J. Exp. Bot., 69, 2018
3JRQ
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BU of 3jrq by Molmil
Crystal structure of (+)-ABA-bound PYL1 in complex with ABI1
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Protein phosphatase 2C 56, Putative uncharacterized protein At5g46790
Authors:Miyazono, K, Miyakawa, T, Sawano, Y, Kubota, K, Tanokura, M.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of abscisic acid signalling
Nature, 462, 2009
3JRS
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BU of 3jrs by Molmil
Crystal structure of (+)-ABA-bound PYL1
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Putative uncharacterized protein At5g46790
Authors:Miyazono, K, Miyakawa, T, Sawano, Y, Kubota, K, Tanokura, M.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of abscisic acid signalling
Nature, 462, 2009
8DOY
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BU of 8doy by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with an inhibitor TKB-198
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3C-like proteinase nsp5, ...
Authors:Bulut, H, Hayashi, H, Tsuji, K, Kuwata, N, Das, D, Tamamura, H, Mitsuya, H.
Deposit date:2022-07-14
Release date:2022-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Potent and biostable inhibitors of the main protease of SARS-CoV-2.
Iscience, 25, 2022

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