2M84
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![BU of 2m84 by Molmil](/molmil-images/mine/2m84) | Structure of 2'F-RNA/2'F-ANA chimeric duplex | Descriptor: | 2'F-RNA/2'F-ANA CHIMERIC DUPLEX | Authors: | Martin-Pintado, N, Deleavey, G, Portella, G, Campos, R, Orozco, M, Damha, M, Gonzalez, C. | Deposit date: | 2013-05-07 | Release date: | 2013-11-27 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Backbone FCHO Hydrogen Bonds in 2'F-Substituted Nucleic Acids. Angew.Chem.Int.Ed.Engl., 52, 2013
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2N89
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![BU of 2n89 by Molmil](/molmil-images/mine/2n89) | Tetrameric i-motif structure of dT-dC-dC-CFL-CFL-dC at acidic pH | Descriptor: | DNA (5'-D(*TP*CP*CP*(CFL)P*(CFL)P*C)-3') | Authors: | Abou-Assi, H, Harkness, R.W, Martin-Pintado, N, Wilds, C.J, Campos-Olivas, R, Mittermaier, A.K, Gonzalez, C, Damha, M.J. | Deposit date: | 2015-10-09 | Release date: | 2016-08-17 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Stabilization of i-motif structures by 2'-beta-fluorination of DNA. Nucleic Acids Res., 44, 2016
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6FC9
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![BU of 6fc9 by Molmil](/molmil-images/mine/6fc9) | The 1,8-bis(aminomethyl)anthracene and Quadruplex-duplex junction complex | Descriptor: | DNA (27-MER), [8-(azaniumylmethyl)anthracen-1-yl]methylazanium | Authors: | Santana, A, Serrano, I, Montalvillo-Jimenez, L, Corzana, F, Bastida, A, Jimenez-Barbero, J, Gonzalez, C, Asensio, J.L. | Deposit date: | 2017-12-20 | Release date: | 2019-04-10 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | De Novo Design of Selective Quadruplex-Duplex Junction Ligands and Structural Characterisation of Their Binding Mode: Targeting the G4 Hot-Spot. Chemistry, 2020
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1SSJ
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![BU of 1ssj by Molmil](/molmil-images/mine/1ssj) | A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (BETA-ANOMER) | Descriptor: | 5'-D(*CP*CP*AP*CP*(HOB)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3' | Authors: | Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C. | Deposit date: | 2004-03-24 | Release date: | 2004-06-01 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct. J.Biol.Chem., 279, 2004
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8BQY
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![BU of 8bqy by Molmil](/molmil-images/mine/8bqy) | An i-motif domain able to undergo pH-dependent conformational transitions (acidic structure) | Descriptor: | DNA (5'-D(*CP*(DNR)P*GP*TP*TP*(DNR)P*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*(DNR)P*CP*GP*T)-3') | Authors: | Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C. | Deposit date: | 2022-11-22 | Release date: | 2023-02-22 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs. J.Am.Chem.Soc., 145, 2023
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8BV6
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![BU of 8bv6 by Molmil](/molmil-images/mine/8bv6) | An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure) | Descriptor: | DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3') | Authors: | Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C. | Deposit date: | 2022-12-01 | Release date: | 2023-02-22 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs. J.Am.Chem.Soc., 145, 2023
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2MRZ
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![BU of 2mrz by Molmil](/molmil-images/mine/2mrz) | Dimeric structure of the Human A-box | Descriptor: | DNA (5'-D(P*TP*CP*CP*TP*TP*TP*TP*CP*CP*A)-3') | Authors: | Garavis, M, Escaja, N, Gabelica, V, Villasante, A, Gonzalez, C. | Deposit date: | 2014-07-18 | Release date: | 2015-06-03 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Centromeric Alpha-Satellite DNA Adopts Dimeric i-Motif Structures Capped by AT Hoogsteen Base Pairs. Chemistry, 21, 2015
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2HK4
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![BU of 2hk4 by Molmil](/molmil-images/mine/2hk4) | |
2JO5
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![BU of 2jo5 by Molmil](/molmil-images/mine/2jo5) | Tetrameric structure of KIA7F peptide | Descriptor: | KIA7F | Authors: | Lopez de la Osa, J, Gonzalez, C, Laurents, D.V, Chakrabartty, A, Bateman, D.A. | Deposit date: | 2007-02-21 | Release date: | 2007-09-18 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | Getting specificity from simplicity in putative proteins from the prebiotic earth. Proc.Natl.Acad.Sci.Usa, 104, 2007
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2JML
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![BU of 2jml by Molmil](/molmil-images/mine/2jml) | Solution structure of the N-terminal domain of CarA repressor | Descriptor: | DNA BINDING DOMAIN/TRANSCRIPTIONAL REGULATOR | Authors: | Jimenez, M, Padmanabhan, S, Gonzalez, C, Perez-Marin, M.C, Elias-Arnanz, M, Murillo, F.J, Rico, M. | Deposit date: | 2006-11-20 | Release date: | 2007-02-13 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | Structural basis for operator and antirepressor recognition by Myxococcus xanthus CarA repressor. Mol.Microbiol., 63, 2007
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2K40
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![BU of 2k40 by Molmil](/molmil-images/mine/2k40) | |
2JO4
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![BU of 2jo4 by Molmil](/molmil-images/mine/2jo4) | Tetrameric structure of KIA7 peptide | Descriptor: | KIA7 | Authors: | Lopez de la Osa, J, Gonzalez, C, Laurents, D.V, Chakrabartty, A, Bateman, D.A. | Deposit date: | 2007-02-21 | Release date: | 2007-09-18 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | Getting specificity from simplicity in putative proteins from the prebiotic earth. Proc.Natl.Acad.Sci.Usa, 104, 2007
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2K8Z
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![BU of 2k8z by Molmil](/molmil-images/mine/2k8z) | Dimeric solution structure of the DNA loop d(TCGTTGCT) | Descriptor: | 5'-D(*TP*CP*GP*TP*TP*GP*CP*T)-3' | Authors: | Viladoms, J, Escaja, N, Frieden, M, Gomez-Pinto, I, Pedroso, E, Gonzalez, C. | Deposit date: | 2008-09-29 | Release date: | 2009-04-28 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Self-association of short DNA loops through minor groove C:G:G:C tetrads. Nucleic Acids Res., 37, 2009
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1DZC
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![BU of 1dzc by Molmil](/molmil-images/mine/1dzc) | High resolution structure of acidic fibroblast growth factor. Mutant FGF-4-ALA-(24-154), 24 NMR structures | Descriptor: | FIBROBLAST GROWTH FACTOR 1 | Authors: | Lozano, R.M, Pineda-Lucena, A, Gonzalez, C, Jimenez, M.A, Cuevas, P, Redondo-Horcajo, M, Sanz, J.M, Rico, M, Gimenez-Gallego, G. | Deposit date: | 2000-02-24 | Release date: | 2000-03-16 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | 1H-NMR Structural Characterization of a Non Mitogenic, Vasodilatory, Ischemia-Protector and Neuromodulatory Acidic Fibroblast Growth Factor Biochemistry, 39, 2000
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1DZD
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![BU of 1dzd by Molmil](/molmil-images/mine/1dzd) | High resolution structure of acidic fibroblast growth factor (27-154), 24 NMR structures | Descriptor: | ACIDIC FIBROBLAST GROWTH FACTOR | Authors: | Lozano, R.M, Pineda-Lucena, A, Gonzalez, C, Jimenez, M.A, Cuevas, P, Redondo-Horcajo, M, Sanz, J.M, Rico, M, Gimenez-Gallego, G. | Deposit date: | 2000-02-24 | Release date: | 2000-03-16 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | 1H-NMR Structural Characterization of a Non Mitogenic, Vasodilatory, Ischemia-Protector and Neuromodulatory Acidic Fibroblast Growth Factor Biochemistry, 39, 2000
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1GPS
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![BU of 1gps by Molmil](/molmil-images/mine/1gps) | SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS | Descriptor: | GAMMA-1-P THIONIN | Authors: | Bruix, M, Jimenez, M.A, Santoro, J, Gonzalez, C, Colilla, F.J, Mendez, E, Rico, M. | Deposit date: | 1992-07-29 | Release date: | 1993-10-31 | Last modified: | 2017-11-29 | Method: | SOLUTION NMR | Cite: | Solution structure of gamma 1-H and gamma 1-P thionins from barley and wheat endosperm determined by 1H-NMR: a structural motif common to toxic arthropod proteins. Biochemistry, 32, 1993
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1GPT
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![BU of 1gpt by Molmil](/molmil-images/mine/1gpt) | SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS | Descriptor: | GAMMA-1-H THIONIN | Authors: | Bruix, M, Jimenez, M.A, Santoro, J, Gonzalez, C, Colilla, F.J, Mendez, E, Rico, M. | Deposit date: | 1992-07-29 | Release date: | 1993-10-31 | Last modified: | 2017-11-29 | Method: | SOLUTION NMR | Cite: | Solution structure of gamma 1-H and gamma 1-P thionins from barley and wheat endosperm determined by 1H-NMR: a structural motif common to toxic arthropod proteins. Biochemistry, 32, 1993
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5NIP
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![BU of 5nip by Molmil](/molmil-images/mine/5nip) | |
5OGA
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![BU of 5oga by Molmil](/molmil-images/mine/5oga) | Structure of minimal i-motif domain | Descriptor: | DNA (5'-D(*TP*(DCP)P*GP*TP*TP*CP*(DCP)P*GP*TP*TP*TP*TP*TP*CP*GP*TP*TP*CP*CP*GP*T)-3') | Authors: | Mir, B, Serrano, I, Buitrago, D, Orozco, M, Escaja, N, Gonzalez, C. | Deposit date: | 2017-07-12 | Release date: | 2017-11-29 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | Prevalent Sequences in the Human Genome Can Form Mini i-Motif Structures at Physiological pH. J. Am. Chem. Soc., 139, 2017
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5MJX
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![BU of 5mjx by Molmil](/molmil-images/mine/5mjx) | 2'F-ANA/DNA Chimeric TBA Quadruplex structure | Descriptor: | DNA (5'-D(*GP*GP*(FT)P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3') | Authors: | Lietard, J, Abou Assi, H, Gomez-Pinto, I, Gonzalez, C, Somoza, M.M, Damha, M.J. | Deposit date: | 2016-12-02 | Release date: | 2017-02-01 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | Mapping the affinity landscape of Thrombin-binding aptamers on 2 F-ANA/DNA chimeric G-Quadruplex microarrays. Nucleic Acids Res., 45, 2017
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2N9F
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![BU of 2n9f by Molmil](/molmil-images/mine/2n9f) | Glucose as non natural nucleobase | Descriptor: | DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*(4JA)P*GP*CP*TP*AP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M. | Deposit date: | 2015-11-20 | Release date: | 2016-08-31 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA. Angew.Chem.Int.Ed.Engl., 55, 2016
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2N9H
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![BU of 2n9h by Molmil](/molmil-images/mine/2n9h) | Glucose as a nuclease mimic in DNA | Descriptor: | DNA (5'-D(*CP*TP*AP*GP*CP*(GL6)P*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*TP*GP*CP*TP*AP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Muro, A, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M. | Deposit date: | 2015-11-25 | Release date: | 2016-08-31 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA. Angew.Chem.Int.Ed.Engl., 55, 2016
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2LYG
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![BU of 2lyg by Molmil](/molmil-images/mine/2lyg) | Fuc_TBA | Descriptor: | 2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside, DNA (5'-D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avio, A, Eritja, R, Gonzalez-Ibaez, C, Morales, J. | Deposit date: | 2012-09-18 | Release date: | 2014-01-29 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Carbohydrate-DNA interactions at G-quadruplexes: folding and stability changes by attaching sugars at the 5'-end. Chemistry, 19, 2013
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5V5F
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![BU of 5v5f by Molmil](/molmil-images/mine/5v5f) | Crystal structure of RICE1 (PNT2) | Descriptor: | At3g11770 | Authors: | Li, P. | Deposit date: | 2017-03-14 | Release date: | 2017-09-13 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (2.945 Å) | Cite: | RISC-interacting clearing 3'- 5' exoribonucleases (RICEs) degrade uridylated cleavage fragments to maintain functional RISC in Arabidopsis thaliana. Elife, 6, 2017
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8FYG
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![BU of 8fyg by Molmil](/molmil-images/mine/8fyg) | Crystal structure of Hyaluronate lyase A from Cutibacterium acnes | Descriptor: | 1,2-ETHANEDIOL, GLYCEROL, Hyaluronate lyase | Authors: | Katiki, M, McNally, R, Chatterjee, A, Hajam, I.A, Liu, G.Y, Murali, R. | Deposit date: | 2023-01-26 | Release date: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Functional divergence of a bacterial enzyme promotes healthy or acneic skin. Nat Commun, 14, 2023
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