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3JD1
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BU of 3jd1 by Molmil
Glutamate dehydrogenase in complex with NADH, closed conformation
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glutamate dehydrogenase 1, mitochondrial
Authors:Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
Deposit date:2016-03-28
Release date:2016-04-27
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
1N8N
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BU of 1n8n by Molmil
Crystal structure of the Au3+ complex of AphA class B acid phosphatase/phosphotransferase from E. coli at 1.69 A resolution
Descriptor: Class B acid phosphatase, GOLD 3+ ION
Authors:Calderone, V, Forleo, C, Benvenuti, M, Rossolini, G.M, Thaller, M.C, Mangani, S.
Deposit date:2002-11-21
Release date:2004-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The first structure of a bacterial class B Acid phosphatase reveals further structural heterogeneity among phosphatases of the haloacid dehalogenase fold.
J.Mol.Biol., 335, 2004
3HQC
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BU of 3hqc by Molmil
Crystal structure of Phosphotyrosine-binding domain from the Human Tensin-like C1 domain-containing phosphatase (TENC1)
Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ...
Authors:Sampathkumar, P, Romero, R, Wasserman, S, Do, J, Dickey, M, Bain, K, Gheyi, T, Klemke, R, Atwell, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-05
Release date:2009-07-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Phosphotyrosine-binding domain from the Human Tensin-like C1 domain-containing phosphatase (TENC1)
To be Published
7RGF
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BU of 7rgf by Molmil
Protocadherin gammaC4 EC1-4 crystal structure disrupted trans interface
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Goodman, K.M, Mannepalli, S, Honig, B, Shapiro, L.
Deposit date:2021-07-15
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:How clustered protocadherin binding specificity is tuned for neuronal self-/nonself-recognition.
Elife, 11, 2022
3E03
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BU of 3e03 by Molmil
Crystal structure of a putative dehydrogenase from Xanthomonas campestris
Descriptor: CALCIUM ION, Short chain dehydrogenase
Authors:Sampathkumar, P, Wasserman, S, Rutter, M, Hu, S, Bain, K, Rodgers, L, Atwell, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-30
Release date:2008-09-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of a putative dehydrogenase from Xanthomonas campestris
To be Published
2KSS
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BU of 2kss by Molmil
NMR structure of Myxococcus xanthus antirepressor CarS1
Descriptor: Carotenogenesis protein carS
Authors:Jimenez, M, Gonzalez, C, Padmanabhan, S, Leon, E, Navarro-Aviles, G, Elias-Arnanz, M.
Deposit date:2010-01-13
Release date:2010-05-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A bacterial antirepressor with SH3 domain topology mimics operator DNA in sequestering the repressor DNA recognition helix.
Nucleic Acids Res., 38, 2010
2GPM
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BU of 2gpm by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3')
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-18
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
1D8H
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BU of 1d8h by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH SULFATE AND MANGANESE IONS.
Descriptor: MANGANESE (II) ION, SULFATE ION, mRNA TRIPHOSPHATASE CET1
Authors:Lima, C.D, Wang, L.K, Shuman, S.
Deposit date:1999-10-24
Release date:1999-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999
2GQ7
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BU of 2gq7 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
1NBO
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BU of 1nbo by Molmil
The dual coenzyme specificity of photosynthetic glyceraldehyde-3-phosphate dehydrogenase interpreted by the crystal structure of A4 isoform complexed with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, glyceraldehyde-3-phosphate dehydrogenase A
Authors:Falini, G, Fermani, S, Ripamonti, A, Sabatino, P, Sparla, F, Pupillo, P, Trost, P.
Deposit date:2002-12-03
Release date:2003-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dual Coenzyme Specificity of Photosynthetic Glyceraldehyde-3-phosphate Dehydrogenase Interpreted by the Crystal Structure of A(4) Isoform Complexed with NAD
Biochemistry, 42, 2003
1N9K
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BU of 1n9k by Molmil
Crystal structure of the bromide adduct of AphA class B acid phosphatase/phosphotransferase from E. coli at 2.2 A resolution
Descriptor: BROMIDE ION, Class B acid phosphatase, MAGNESIUM ION
Authors:Calderone, V, Forleo, C, Benvenuti, M, Rossolini, G.M, Thaller, M.C, Mangani, S.
Deposit date:2002-11-25
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The first structure of a bacterial class B Acid phosphatase reveals further structural heterogeneity among phosphatases of the haloacid dehalogenase fold.
J.Mol.Biol., 335, 2004
6HNC
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BU of 6hnc by Molmil
Trypanosoma brucei PTR1 in complex with cycloguanil
Descriptor: 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Landi, G, Pozzi, C, Mangani, S.
Deposit date:2018-09-14
Release date:2019-05-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Insights into the Development of Cycloguanil Derivatives asTrypanosoma bruceiPteridine-Reductase-1 Inhibitors.
Acs Infect Dis., 5, 2019
3DOU
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BU of 3dou by Molmil
Crystal structure of methyltransferase involved in cell division from thermoplasma volcanicum gss1
Descriptor: Ribosomal RNA large subunit methyltransferase J, S-ADENOSYLMETHIONINE
Authors:Patskovsky, Y, Ozyurt, S, Dickey, M, Hu, S, Bain, K, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-06
Release date:2008-09-02
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Methyltransferase Involved in Cell Division from Thermoplasma Volcanicum
To be Published
6HOW
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BU of 6how by Molmil
Trypanosoma brucei PTR1 in complex with the triazine inhibitor 2a (F219).
Descriptor: (2~{R})-1-(3,4-dichlorophenyl)-2-(4-nitrophenyl)-2~{H}-1,3,5-triazine-4,6-diamine, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pteridine reductase
Authors:Landi, G, Pozzi, C, Mangani, S.
Deposit date:2018-09-18
Release date:2019-05-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Insights into the Development of Cycloguanil Derivatives asTrypanosoma bruceiPteridine-Reductase-1 Inhibitors.
Acs Infect Dis., 5, 2019
3I5R
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BU of 3i5r by Molmil
PI3K SH3 domain in complex with a peptide ligand
Descriptor: Peptide ligand, Phosphatidylinositol 3-kinase regulatory subunit alpha
Authors:Batra-Safferling, R, Granzin, J, Modder, S, Hoffmann, S, Willbold, D.
Deposit date:2009-07-06
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural studies of the phosphatidylinositol 3-kinase (PI3K) SH3 domain in complex with a peptide ligand: role of the anchor residue in ligand binding.
Biol.Chem., 391, 2010
3I5S
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BU of 3i5s by Molmil
Crystal structure of PI3K SH3
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, SULFATE ION
Authors:Batra-Safferling, R, Granzin, J, Modder, S, Hoffmann, S, Willbold, D.
Deposit date:2009-07-06
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural studies of the phosphatidylinositol 3-kinase (PI3K) SH3 domain in complex with a peptide ligand: role of the anchor residue in ligand binding.
Biol.Chem., 391, 2010
2GQ4
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BU of 2gq4 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ6
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BU of 2gq6 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ5
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BU of 2gq5 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
3L8K
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BU of 3l8k by Molmil
Crystal structure of a dihydrolipoyl dehydrogenase from Sulfolobus solfataricus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dihydrolipoyl dehydrogenase, PHOSPHATE ION
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Miller, S, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-31
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a dihydrolipoyl dehydrogenase from Sulfolobus solfataricus
To be Published
3GO2
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BU of 3go2 by Molmil
Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium
Descriptor: MAGNESIUM ION, Putative L-alanine-DL-glutamate epimerase
Authors:Bonanno, J.B, Dickey, M, Bain, K.T, Chang, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-18
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium.
To be Published
3GMG
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BU of 3gmg by Molmil
Crystal structure of an uncharacterized conserved protein from Mycobacterium tuberculosis
Descriptor: Uncharacterized protein Rv1825/MT1873
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Chang, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-13
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of an uncharacterized conserved protein from Mycobacterium tuberculosis
To be Published
2LBU
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BU of 2lbu by Molmil
HADDOCK calculated model of Congo red bound to the HET-s amyloid
Descriptor: Small s protein, sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)
Authors:Schutz, A.K, Soragni, A, Hornemann, S, Aguzzi, A, Ernst, M, Bockmann, A, Meier, B.H.
Deposit date:2011-04-07
Release date:2011-06-01
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The Amyloid-Congo Red Interface at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 2011
2L6W
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BU of 2l6w by Molmil
PDGFR beta-TM
Descriptor: Beta-type platelet-derived growth factor receptor
Authors:Muhle-Goll, C, Hoffmann, S, Ulrich, A.S.
Deposit date:2010-11-29
Release date:2012-05-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Hydrophobic matching controls the tilt and stability of the dimeric platelet-derived growth factor receptor (PDGFR) beta transmembrane segment.
J.Biol.Chem., 287, 2012
2LT3
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BU of 2lt3 by Molmil
Solution NMR structure of the C-terminal domain of CdnL from Myxococcus xanthus
Descriptor: Transcriptional regulator, CarD family
Authors:Mirassou, Y, Garcia-Moreno, D, Padmanabhan, S, Jimenez, M.A.
Deposit date:2012-05-14
Release date:2013-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014

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